CN188900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD2_SPHWW (Bifunctional protein folD 2 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=folD2 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.206e-30 Identity = 75/166 (45.18%), Postives = 107/166 (64.46%), Query Frame = -1 Query: 157 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 654 +N+G L+ G L +PCTP G + LL ++ G +AVVIG+SNIVG P ++LL ATV++ H T+ I +ADI++AAAG LV+G W+K GAV++DVG ++ P RL+GDV ++E A +TPVPGGVGPMT+A LL+NT+ +A+ Sbjct: 137 VNVGRLST-GTGGL-VPCTPLGVMMLLDSVIDDMKGMDAVVIGKSNIVGKPIAMLLLEREATVTVTHIETRGLPDIVRKADIIVAAAGAPRLVKGYWVKEGAVIIDVG-----ITRLPGEGGKTRLVGDVAFDEVQH-ARAVTPVPGGVGPMTIACLLANTVKAAE 294
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_RHOSK (Bifunctional protein folD OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=folD PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.412e-30 Identity = 72/169 (42.60%), Postives = 102/169 (60.36%), Query Frame = -1 Query: 145 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 651 N+G L + +PCTP GC+ +L + G NAVV+GRSNIVG P + LL TV++ H+ T++ + ADI++AA G ++ G ++KPGA V+DVG ++ + +L+GDV Y A +A ITPVPGGVGPMT+A LL+NTL + RA G Sbjct: 127 NVGRLGTGQKS--MVPCTPLGCLMMLRDHLGTLSGLNAVVVGRSNIVGKPMAQLLLGESCTVTVAHSRTRDLAAVCRGADILVAAVGRPEMITGDFVKPGATVIDVGINRIE------RDGKTKLVGDVDYASAAEVAGAITPVPGGVGPMTIACLLANTLTACCRANG 287
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_RALME (Bifunctional protein folD OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=folD PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.412e-30 Identity = 70/158 (44.30%), Postives = 99/158 (62.66%), Query Frame = -1 Query: 145 PLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 618 PLF PCTP GC+++L + G AVV+G SNIVG P +++L + ATV+I ++ T++ T +AD+++AA G N++ +KPGAVV+DVG D +L GDV + +A ITPVPGGVGPMT+ MLL NTL++A+R G Sbjct: 135 PLFRPCTPYGCMKMLESIQYPLRGARAVVVGASNIVGKPMAMMLLQAGATVTICNSKTRDLAAHTRDADVIVAAVGRRNIITADIVKPGAVVIDVGMNRDDAG---------KLCGDVDFAGVREVAGHITPVPGGVGPMTITMLLINTLEAAEREAG 283
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_METAC (Bifunctional protein folD OS=Methanosarcina acetivorans GN=folD PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.412e-30 Identity = 70/167 (41.92%), Postives = 102/167 (61.08%), Query Frame = -1 Query: 151 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 651 N+G L M G E L +PCTP G I L GV + GKNAV++G SN+VG P + +L +ATVS+ H T + ++ T ADI++ A GV +L++ +K G V+ D G + V GDV +E ++ AS++TPVPGGVGPMT+AML+ + L A+++ Sbjct: 135 NMGKL-MIGDEDL-VPCTPHGVIRALEEYGVSVQGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHIFTDDLKKYTLGADIIVVATGVKHLIKADMVKEGTVIFDAGITKEEDGV----------YGDVDFENVIKKASLVTPVPGGVGPMTIAMLMKHVLLCAEKS 289
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_HYDS0 (Bifunctional protein folD OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=folD PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.412e-30 Identity = 74/166 (44.58%), Postives = 100/166 (60.24%), Query Frame = -1 Query: 154 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 651 N+G L E FIPCTP G LL +++ GKN ++G IVG P S+L+ + ATVS+ H TK+ + T ADI+I+A GV L++ +K GAVV+DVG V+ +++GDV +E + AS ITPVPGGVGPMTVA LL NTL + K+ Sbjct: 121 NMGKLFSGDLENAFIPCTPLGIKLLLDEYNIDLKGKNVCIVGAGFIVGKPLSMLMLNYDATVSVCHKYTKDIVEYTKTADILISATGVPFLIKDYMVKEGAVVIDVGISKVN----------GKIVGDVDFESISQKASFITPVPGGVGPMTVATLLLNTLKAYKQ 276
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_CHLFF (Bifunctional protein folD OS=Chlamydophila felis (strain Fe/C-56) GN=folD PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.412e-30 Identity = 72/172 (41.86%), Postives = 110/172 (63.95%), Query Frame = -1 Query: 151 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLP-TSLLLQRH---HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 654 +N+G L + G+ F PCTP IELL + + G++ V+GRSNIVG P ++L+Q+H +ATV+++H+ ++N +I ADI++AA GV ++ + + P AV++DVG V + D GY L+GDV + + ITPVPGGVGPMTVAML+ NT +S +++ Sbjct: 119 VNMGKLLL-GQLGGFSPCTPAAVIELLNYYDIPLQGRHVAVVGRSNIVGKPLAAMLMQKHPTTNATVTLLHSQSQNFTEILKTADIIVAAVGVPLFIQENMISPNAVIVDVGISRVATNNDK----GYMLVGDVDFNNVVTKCKAITPVPGGVGPMTVAMLMKNTWESYQKS 285
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BRAHW (Bifunctional protein folD OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=folD PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.412e-30 Identity = 73/146 (50.00%), Postives = 96/146 (65.75%), Query Frame = -1 Query: 169 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTL 606 PCT K + L+ +SG+ I G NAVVIGRS IVG P + LL + ATV+I H+ TKN +++ ADI+ + G A + G ++K GAVV+DVG ++V D S L GDV +EEA +LAS ITPVP GVG +TV+MLL N L Sbjct: 135 PCTAKSAMALIEKSGINIEGANAVVIGRSEIVGKPLAHLLLQKSATVTIAHSKTKNLKELCKNADILCVSIGKAEFITGEYIKEGAVVIDVG---INVLEDGS------LKGDVNFEEASKLASYITPVPNGVGSVTVSMLLDNVL 271
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_STRSV (Bifunctional protein folD OS=Streptococcus sanguinis (strain SK36) GN=folD PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.229e-29 Identity = 72/168 (42.86%), Postives = 103/168 (61.31%), Query Frame = -1 Query: 151 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 654 LN+G L P+ IP TP G + + G+E+ GK AVVIGRSNIVG P + LL +ATV++ H+ T N + ADI++ A G + V +++K GAVV+DVG + + +L+GDV ++E +AS+ITPVPGGVGPMT+ ML+ T + KR+ Sbjct: 125 LNMGKLW--SGHPVMIPATPAGIMAMFHEYGIELEGKRAVVIGRSNIVGKPMAQLLLAKNATVTLTHSRTHNLAKTAKRADILVVAIGRGHFVTKNFVKEGAVVIDVGM---------NRDENGKLIGDVKFDEVAEIASLITPVPGGVGPMTITMLMEQTYQAFKRS 281
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_STRGC (Bifunctional protein folD OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=folD PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.229e-29 Identity = 73/168 (43.45%), Postives = 102/168 (60.71%), Query Frame = -1 Query: 151 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 654 LN+G L P+ IP TP G + + GVE+ GK AVVIGRSNIVG P + LL +ATV++ H+ T N + ADI++ A G + V ++K GAVV+DVG + + +L+GDV ++E +AS+ITPVPGGVGPMT+ ML+ T + KR+ Sbjct: 125 LNMGKLW--SGHPVMIPATPAGIMAMFHEYGVELEGKRAVVIGRSNIVGKPMAQLLLAKNATVTLTHSRTHNLAKTAKRADILVVAIGRGHFVTKDFVKEGAVVIDVGM---------NRDENGKLIGDVQFDEVSEIASLITPVPGGVGPMTITMLMEQTYQAFKRS 281
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_SHESH (Bifunctional protein folD OS=Shewanella sediminis (strain HAW-EB3) GN=folD PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.229e-29 Identity = 73/166 (43.98%), Postives = 101/166 (60.84%), Query Frame = -1 Query: 154 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 651 N+G LA R P+ CTP G + L+ +G++ G +AV++G SNIVG P SL L T + H T+N EQ +AD+++ A G + G W+KPGA+V+DVG ++ D S L GDV ++ A AS ITPVPGGVGPMT+A LL NTL +A++ Sbjct: 127 NVGRLAQR--IPVLRSCTPMGIMTLIKTTGIDTYGLDAVIVGASNIVGRPMSLELLLAGCTTTTCHRFTRNLEQKVRQADLLVVAVGKPGFIPGEWIKPGAIVIDVG---INRLEDGS------LAGDVQFDAASENASFITPVPGGVGPMTIASLLENTLYAAEQ 281 The following BLAST results are available for this feature:
BLAST of CN188900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188900 ID=CN188900; Name=CN188900; organism=Citrus sinensis; type=EST; length=654bpback to top |