CN188900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_RHOBA (Bifunctional protein folD OS=Rhodopirellula baltica GN=folD PE=3 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 2.557e-35 Identity = 83/175 (47.43%), Postives = 117/175 (66.86%), Query Frame = -1 Query: 157 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH---------HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 654 +N+G L M+GR P F+PCTP G ++LL R+G+E GK+ VV+GRS+IVG P +++L + +ATV+I H+ T N +I +ADI+IAA G ++ ++PGAVV+DVG V G +L+GDV ++EA +AS ITPVPGGVGP+T+AMLL NTL +AK Sbjct: 132 VNVG-LLMQGR-PRFLPCTPHGIVQLLHRTGIETSGKHVVVVGRSDIVGKPMAMMLAQKDSTCGPAVANATVTIAHSRTSNLAEICRQADILIAAVGRPEMITAEMIQPGAVVIDVGINRV----------GDKLVGDVAFDEAEAVASAITPVPGGVGPLTIAMLLHNTLMAAK 294
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_RHISN (Bifunctional protein folD OS=Rhizobium sp. (strain NGR234) GN=folD PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.557e-35 Identity = 80/169 (47.34%), Postives = 110/169 (65.09%), Query Frame = -1 Query: 151 LNIGNLAMRGREPLFIPCTPKGCIELLIR-SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 654 +N+G L E F+PCTP GC+ L+ R G ++ G +AVV+GRSNIVG P + LL +ATV+I H+ T N E + +ADI+IAA G ++R W+KPGA V+DVG + D RL+GDV ++ A+ A +TPVPGGVGPMT+AML++NTL +A A Sbjct: 127 INVGKLGTGALETAFVPCTPAGCMILVERIHGKDLSGLSAVVVGRSNIVGKPMANLLLAANATVTIAHSRTANLEVLCRQADILIAAVGRPEMIRSDWIKPGATVIDVGINRIASRDDGG---KTRLVGDVDFDGAVERAGAVTPVPGGVGPMTIAMLMANTLRAACHA 292
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_GEOUR (Bifunctional protein folD OS=Geobacter uraniireducens (strain Rf4) GN=folD PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.340e-35 Identity = 78/166 (46.99%), Postives = 109/166 (65.66%), Query Frame = -1 Query: 154 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 651 N+G L + +PLF PCTP G + +L +GVE+ GK VV+GRSNIVG P + + + +ATV++ H+ T++ AD+VIAA G +++G+W+K GAVV+DVG V +L+GDV ++ A AS ITPVPGGVGPMT+ MLL NTL++AKR Sbjct: 125 NVGRLVIG--KPLFQPCTPYGVMVMLKEAGVELAGKEVVVVGRSNIVGKPVAFMCLQQNATVTLCHSKTRDLAAKVGMADVVIAAVGQPEMIKGAWIKEGAVVIDVGVNRVGEK---------KLVGDVEFDAAAERASAITPVPGGVGPMTITMLLYNTLEAAKR 279
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_AKKM8 (Bifunctional protein folD OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=folD PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.340e-35 Identity = 80/171 (46.78%), Postives = 112/171 (65.50%), Query Frame = -1 Query: 145 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLL--QRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 651 N+ L + E F+PCTP GC+ LL +G+E G NAVVIGRS IVG P + LL ++ +ATV++ H+ TKN ++ ADI++AA G V ++K GAVV+DVG V+ D S + GYR++GDV Y+E ITPVPGGVGPMT+AML++NT+ + ++ G Sbjct: 124 NVAKLVLED-ETGFVPCTPLGCMRLLKAAGIETAGANAVVIGRSMIVGKPMAHLLMSKQANATVTVAHSRTKNLPELCRSADIIVAAIGRPAFVTADFVKDGAVVVDVGINRVE---DASAKRGYRIVGDVAYDEVAPKCRAITPVPGGVGPMTIAMLMANTVKACRQQTG 290
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD2_SINMW (Bifunctional protein folD 2 OS=Sinorhizobium medicae (strain WSM419) GN=folD2 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.340e-35 Identity = 86/169 (50.89%), Postives = 108/169 (63.91%), Query Frame = -1 Query: 148 NIGNLAMRGREPLFIPCTPKGCIELLI-RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 651 N G LA +P F+PCTP GC+ LL R G + G +AVV+G+SNIVG P LL TV+I H+ T+N ++ EADI+I A G LVRG W+KPGAVV+DVG V+ E R++GDV +EEA A ITPVPGGVGPMT+A LLSNTL + R + Sbjct: 133 NAGRLATG--QPAFVPCTPLGCLLLLKDRLGANLSGLHAVVLGKSNIVGRPMVQLLLAESCTVTIAHSRTRNAPELCREADILIVAVGRPGLVRGDWIKPGAVVIDVGINRVE------AEGKSRIVGDVAFEEAGH-AGAITPVPGGVGPMTIACLLSNTLTAFCRQH 292
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_CHRVO (Bifunctional protein folD OS=Chromobacterium violaceum GN=folD PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.362e-35 Identity = 78/164 (47.56%), Postives = 105/164 (64.02%), Query Frame = -1 Query: 160 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 651 N+G LA++ PL PCTP+G + LL G++ GK AV++G SNIVG P +L + ATV++ H+ T+N + + ADI++ G+ N V+G W+KPGAVV+DVG +D +L GDV ++ A A ITPVPGGVGPMTVA LL NTLDSA Sbjct: 127 NVGRLAIK--MPLMRPCTPRGVMTLLEEYGIDPKGKKAVIVGASNIVGRPQALEMLLARATVTVCHSATRNLAEEVAAADILVVGVGIPNFVKGEWVKPGAVVIDVGINRLDTG---------KLCGDVEFDAARERAGFITPVPGGVGPMTVATLLQNTLDSA 279
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BACA2 (Bifunctional protein folD OS=Bacillus amyloliquefaciens (strain FZB42) GN=folD PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.362e-35 Identity = 77/167 (46.11%), Postives = 107/167 (64.07%), Query Frame = -1 Query: 154 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 654 LN+G + + E F+PCTP G +ELL ++ V++ GK VV+GRSNIVG P LL +ATV+ H+ TKN + T +ADI++ A G AN ++ +K GA+V+DVG ++ +L GDV ++EA AS ITPVPGGVGPMT+ ML NT+ SA+R Sbjct: 125 LNVGKMLLG--EDTFLPCTPHGIVELLKKTNVDLSGKEVVVVGRSNIVGKPVGQLLLNENATVTYCHSRTKNMSEHTKKADILVVAVGKANFIKADQIKEGAIVIDVGVNRLESG---------KLCGDVQFDEAKEKASFITPVPGGVGPMTITMLAHNTVKSARR 280
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_POLSJ (Bifunctional protein folD OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=folD PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.697e-35 Identity = 76/156 (48.72%), Postives = 107/156 (68.59%), Query Frame = -1 Query: 154 EPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 621 +P F PCTP GC+++L G ++ GK+AVVIGRSNIVG P +++L + +ATV+I H+ TK+ + +T +AD+++AA G N++ +KPGAVV+DVG D +L GDV +E +A ITPVPGGVGPMT+ MLL NTL+SA+R Sbjct: 134 QPGFWPCTPYGCMKMLESIGYDLRGKHAVVIGRSNIVGKPMAMMLLQKNATVTICHSATKDLKAMTLQADVIVAAVGKRNVLTADMVKPGAVVIDVGMNRNDEG---------KLCGDVDFEGVKEVAGYITPVPGGVGPMTITMLLVNTLESAER 280
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_EHRCJ (Bifunctional protein folD OS=Ehrlichia canis (strain Jake) GN=folD PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.697e-35 Identity = 78/165 (47.27%), Postives = 107/165 (64.85%), Query Frame = -1 Query: 160 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGY-RLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 651 N+G L + IPCTP+GC+ L+ + G +AVVIGRSNIVG P + LL + TV+ VH+ T+N S+ADI++AA G+ N V+ SW+KPGA+V+DVG V+ E G + +GDV + EA +AS ITPVPGGVGPMT+A L+ NT+ +A Sbjct: 127 NVGRLFTGQKRNCLIPCTPRGCLYLIKTVTHNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRNLSDYCSKADILVAAVGIPNFVKSSWIKPGAIVIDVGINSVE-------EDGVKKFVGDVNFAEAKNVASAITPVPGGVGPMTIAFLMVNTVMAA 284
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_CYAP7 (Bifunctional protein folD OS=Cyanothece sp. (strain PCC 7424) GN=folD PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.697e-35 Identity = 86/166 (51.81%), Postives = 114/166 (68.67%), Query Frame = -1 Query: 154 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 651 N+G L +RG EP CTP G + LL +E+ GK+AVVIGRS +VG P L+L +ATV+I H+LT+N ++T ADI++AAAG ANL+ +KPGAVV+DVG ++ D S + RL+GDV YE +A ITPVPGG+GPMTVAMLLSNT+ S ++ Sbjct: 130 NLGRL-VRG-EPGLRSCTPAGVMALLEEYNLEVKGKHAVVIGRSILVGKPMGLMLLEENATVTIAHSLTQNLTELTRSADILVAAAGKANLITPEMVKPGAVVIDVGINRIE---DESGK--ARLVGDVDYEGVAEVAQYITPVPGGIGPMTVAMLLSNTVYSYRQ 288 The following BLAST results are available for this feature:
BLAST of CN188900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188900 ID=CN188900; Name=CN188900; organism=Citrus sinensis; type=EST; length=654bpback to top |