CN188900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_RHIL3 (Bifunctional protein folD OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=folD PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.269e-34 Identity = 81/173 (46.82%), Postives = 111/173 (64.16%), Query Frame = -1 Query: 139 LNIGNLAMRGREPLFIPCTPKGCIELLIRS-GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 654 +N G LA + + CTP G + + R+ G ++ G NAVVIGRSN+ G P + LL +ATV+I H+ TKN ++ ADI++AA G +VR W+KPGA V+DVG V+ + E RL+GDV +EE +AS ITPVPGGVGPMT+AML++NT+ +A R G T Sbjct: 125 VNAGKLATGDLKTGLVSCTPAGAMVFVRRTHGEDLSGLNAVVIGRSNLFGKPMAQLLLNANATVTIAHSRTKNLAEVCRNADILVAAVGRPEMVRADWVKPGATVIDVGI--NRVAAPETGEGKTRLVGDVAFEEVSAVASTITPVPGGVGPMTIAMLMANTVIAAHRTAGQT 295
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_HAHCH (Bifunctional protein folD OS=Hahella chejuensis (strain KCTC 2396) GN=folD PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.269e-34 Identity = 82/168 (48.81%), Postives = 104/168 (61.90%), Query Frame = -1 Query: 148 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 651 N+G LA R P+ PCTPKG + LL R+GVE+ GK+A+V+G SNIVG P L L TV+I H T N S+ADIV+ A G +V+G W+KPGA+V+DVG D L+GD+ + EA AS ITPVPGGVGPMTVA L+ NTL +A + Sbjct: 136 NLGRLAQR--MPVLRPCTPKGIMTLLARTGVELRGKDALVVGASNIVGRPMGLELLLAGCTVTITHRFTVNLPAKVSQADIVVVAVGRPGIVKGEWIKPGAIVIDVGINRRDDGA---------LVGDIEFNEAAERASWITPVPGGVGPMTVATLMENTLYAANHLH 292
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_DEHSB (Bifunctional protein folD OS=Dehalococcoides sp. (strain BAV1) GN=folD PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.269e-34 Identity = 83/175 (47.43%), Postives = 117/175 (66.86%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLP-TSLLLQR---HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLM-GDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N+G + + EP F+PCTP G ELLIRSG++I G + V++GRSN+VG P ++LLQ+ +ATV+I H+ TKN +IT +ADI++AA G + ++ GAVV+DVGT + + + G R++ GDV +EE A ITPVP GVGPMT+ ML+ NTL +AKRA G Sbjct: 126 VNVGRMCLG--EPCFLPCTPHGVQELLIRSGIKIEGTHVVIVGRSNLVGKPLANILLQKAPGANATVTICHSGTKNLPEITRQADILVAAMGKPKFITSDMVREGAVVIDVGTTCIGYTPE-----GKRILSGDVDFEEVKEKAFAITPVPKGVGPMTIIMLMLNTLTAAKRAAG 293
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD2_PSE14 (Bifunctional protein folD 2 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=folD2 PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.269e-34 Identity = 77/166 (46.39%), Postives = 114/166 (68.67%), Query Frame = -1 Query: 154 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 651 N+G L+ +GR L PCTP GC+ LL + ++ GK+AVVIGRSNIVG P + LL + H +V++VH+ + + + + ADIV+AA G ++ SWLKPGAVV+DVG ++ + RL+GD+ ++ A+ +AS ITPVPGGVGPMT+A L+ NT+ +A++ Sbjct: 126 NVGGLS-QGRSVL-TPCTPSGCMHLLEETCGDLSGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCQLADIVVAAVGRPRMIDASWLKPGAVVIDVGINRIE------DQGRSRLVGDIDFDNALSVASAITPVPGGVGPMTIAFLMKNTVTAARQ 283
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_STAEQ (Bifunctional protein folD OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=folD PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.658e-34 Identity = 79/172 (45.93%), Postives = 110/172 (63.95%), Query Frame = -1 Query: 139 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 654 +NIG L + E F+PCTP G +E+L + + + GKNAVVIGRS+IVG P S LL + +ATV+I+H+ TKN +AD++++A G LV +K GAV++DVG P + +L GDV Y+E +AS ITPVPGGVGP+T+ M+L+NTL + K G T Sbjct: 125 INIGKLYID--EQTFVPCTPLGIMEILKHADINLEGKNAVVIGRSHIVGQPVSKLLLQANATVTILHSRTKNMNAHLKQADVIVSAVGQPGLVTKENVKKGAVIIDVGNTP---------DENGKLKGDVAYDEIKEIASAITPVPGGVGPLTITMVLNNTLLAEKLRRGLT 285
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_NITWN (Bifunctional protein folD OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=folD PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.658e-34 Identity = 82/164 (50.00%), Postives = 104/164 (63.41%), Query Frame = -1 Query: 160 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 651 N G LA G PCTP GCI L + G +A+VIGRSN+VG P LL +ATV+I H+ ++N ++ AD+V AA G A +VRG WLKPGA V+DVG V P+ E RL+GDV ++EAM++A +TPVPGGVG MTVA LL NTL +A Sbjct: 127 NAGRLA--GGLSALSPCTPLGCIILTKSVHASLEGLDAIVIGRSNLVGRPLVQLLLNENATVTIAHSRSRNLPELCRRADLVYAAVGRAEMVRGDWLKPGATVIDVGITRV-----PAAEGKTRLIGDVAFDEAMQVAGAVTPVPGGVGQMTVACLLVNTLRAA 283
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_EHRCR (Bifunctional protein folD OS=Ehrlichia chaffeensis (strain Arkansas) GN=folD PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.658e-34 Identity = 75/165 (45.45%), Postives = 108/165 (65.45%), Query Frame = -1 Query: 160 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGY-RLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 651 N+G L ++ IPCTP+GC+ L+ + G +AVVIGRSNIVG P + LL + TV+ VH+ T+N S+AD+++AA G+ + V+ SW+KPGA+V+DVG ++ E G + +GDV + EA +AS ITPVPGGVGPMT+A L+ NT+ +A Sbjct: 127 NVGRLFTGQKKDCLIPCTPRGCLYLIKTVTRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRNLPDYCSKADVLVAAVGIPHFVKSSWIKPGAIVIDVGINAIE-------EGGVKKFVGDVDFSEARNIASAITPVPGGVGPMTIAFLMVNTVIAA 284
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_RHILT (Bifunctional protein folD OS=Rhizobium leguminosarum bv. trifolii GN=folD PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.165e-34 Identity = 81/173 (46.82%), Postives = 110/173 (63.58%), Query Frame = -1 Query: 139 LNIGNLAMRGREPLFIPCTPKGCIELLIRS-GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 654 +N G LA + + CTP G + + R+ G ++ G NAVVIGRSN+ G P + LL +ATV+I H+ TKN ++ ADI++AA G +VR W+KPGA V+DVG V+ E RL+GDV +EE +AS ITPVPGGVGPMT+AML++NT+ +A R G T Sbjct: 125 VNAGKLATGDLKTGLVSCTPAGAMVFVRRTHGEDLSGLNAVVIGRSNLFGKPMAQLLLNANATVTIAHSRTKNLAEVCRNADILVAAVGRPEMVRADWVKPGATVIDVGI--NRVAAPERGEGKTRLVGDVAFEEVSAVASTITPVPGGVGPMTIAMLMANTVIAAHRTAGQT 295
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_ERYLH (Bifunctional protein folD OS=Erythrobacter litoralis (strain HTCC2594) GN=folD PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.165e-34 Identity = 84/170 (49.41%), Postives = 111/170 (65.29%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 +N G L++ R F+PCTP GC+ LL ++ G AVVIGRSNIVG P + LL +ATV+I H+ T+N ++ ADIV+AA G A +V+ WLK GA V+DVG + +P E G RL+GDV + A +A+ ITPVPGGVGPMT+A+LL NTL +A R G Sbjct: 126 INAGRLSVGQRG--FVPCTPLGCMMLLADRLGDLSGLEAVVIGRSNIVGKPMAQLLLDANATVTIAHSRTRNLPEVVKRADIVVAAVGRAEMVKPEWLKDGATVIDVGI--NRLPPEPGKERG-RLVGDVDFGRASEVAAAITPVPGGVGPMTIAVLLRNTLVAAHRNEG 290
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_CAUCR (Bifunctional protein folD OS=Caulobacter crescentus GN=folD PE=3 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 2.165e-34 Identity = 81/171 (47.37%), Postives = 109/171 (63.74%), Query Frame = -1 Query: 145 NIGNLAMRGREPLFIPCTPKGCIELLIRSGV-EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG-YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 651 N G LA P PCTP GC+ +LIR + ++ GK AVVIGRSN++G P + +L TV+I H+ +++ I +ADIV+AA G A +V+ W+KPGAVV+DVG + G RL+GDV ++E +A ITPVPGGVGPMT+A LL+NTL +AKR G Sbjct: 128 NAGRLA--SGLPALAPCTPTGCM-MLIRDAIGDLKGKTAVVIGRSNLMGKPMAQMLLAADCTVTIAHSRSQDLPSIVRQADIVVAAVGRAEMVKADWVKPGAVVIDVGITRFPARDPEAAAAGKTRLVGDVAFDEVREVAGAITPVPGGVGPMTIACLLANTLTAAKRLSG 295 The following BLAST results are available for this feature:
BLAST of CN188900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188900 ID=CN188900; Name=CN188900; organism=Citrus sinensis; type=EST; length=654bpback to top |