CN188900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_CAUCN (Bifunctional protein folD OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=folD PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.165e-34 Identity = 81/171 (47.37%), Postives = 109/171 (63.74%), Query Frame = -1 Query: 145 NIGNLAMRGREPLFIPCTPKGCIELLIRSGV-EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG-YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 651 N G LA P PCTP GC+ +LIR + ++ GK AVVIGRSN++G P + +L TV+I H+ +++ I +ADIV+AA G A +V+ W+KPGAVV+DVG + G RL+GDV ++E +A ITPVPGGVGPMT+A LL+NTL +AKR G Sbjct: 128 NAGRLA--SGLPALAPCTPTGCM-MLIRDAIGDLKGKTAVVIGRSNLMGKPMAQMLLAADCTVTIAHSRSQDLPSIVRQADIVVAAVGRAEMVKADWVKPGAVVIDVGITRFPARDPEAAAAGKTRLVGDVAFDEVREVAGAITPVPGGVGPMTIACLLANTLTAAKRLSG 295
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD1_RHIEC (Bifunctional protein folD 1 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=folD1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.165e-34 Identity = 81/176 (46.02%), Postives = 113/176 (64.20%), Query Frame = -1 Query: 139 LNIGNLAMRGREPLFIPCTPKGCIELLIRS-GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG---YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 654 +N G LA + + CTP G + + R+ G ++ G NAVVIGRSN+ G P + LL +ATV+I H+ TKN ++ ADI++AA G +V+ W+KPGA V+DVG ++ P+ E G RL+GDV + E +AS ITPVPGGVGPMT+AML++NT+ +A RA G T Sbjct: 125 VNAGKLATGDLKTGLVSCTPAGAMVFVRRTHGEDLSGLNAVVIGRSNLFGKPMAQLLLNANATVTIAHSRTKNLAEVCRNADILVAAVGRPEMVKADWVKPGATVIDVG-----INRVPAPEKGEGKTRLVGDVAFREVSEIASTITPVPGGVGPMTIAMLMANTVIAAHRAAGQT 295
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_MESSB (Bifunctional protein folD OS=Mesorhizobium sp. (strain BNC1) GN=folD PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.827e-34 Identity = 85/175 (48.57%), Postives = 112/175 (64.00%), Query Frame = -1 Query: 145 LNIGNLAMRGREPLFIPCTPKGCIELLIRS--GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG---YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 654 LN+G L +PCTP G + LLI G ++ G +AVVIGRSNIVG P + LL +ATV+I H+ T + ADI++AA G +V+G W+KPGA V+DVG VS P+ E G +L+GDV Y EA ++A ITPVPGGVGPMT+AML++NTL +A +A G Sbjct: 124 LNVGMLGTGAVTKALVPCTPAGAM-LLIEGVRGKDLSGLSAVVIGRSNIVGKPMANLLLAANATVTIAHSRTADLPAACRGADILVAAVGRPEMVKGDWIKPGATVIDVG-----VSRIPAPEKGEGKMKLVGDVAYAEAEKVAGAITPVPGGVGPMTIAMLMANTLAAASKASG 292
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_RHORT (Bifunctional protein folD OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=folD PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.693e-34 Identity = 79/168 (47.02%), Postives = 110/168 (65.48%), Query Frame = -1 Query: 157 LNIGNLAM--RGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 654 +N+G L++ E +PCTPKGC+ LL ++ GK A+VIGRSNIVG P + LL + TV++ H+ +++ + DIV+AA G +V+G WLKPGAVV+DVG + + P E G +L+GDV Y A +A ITPVPGGVGPMT+A LL+NTL++ K Sbjct: 126 VNVGRLSIGQSNGEHGMVPCTPKGCLMLLKGVLGDLTGKTALVIGRSNIVGKPMAQLLLSANCTVTLAHSRSRDLPDLCRRMDIVVAAVGRPEMVKGDWLKPGAVVIDVGMNRLPAA--PGAEKG-KLVGDVDYASAAAVAGAITPVPGGVGPMTIACLLANTLEACK 290
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_LARHH (Bifunctional protein folD OS=Laribacter hongkongensis (strain HLHK9) GN=folD PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.693e-34 Identity = 79/164 (48.17%), Postives = 109/164 (66.46%), Query Frame = -1 Query: 160 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 651 N+G LA++ PL PCTP+G + +L +G+ + GK+AVVIG+SNIVG P +L L ATV+I H+ T++ + ADI++AA G+ V+G W+KPGAVV+DVG ++ +L GDV ++ A AS ITPVPGGVG MTVA LL+NTLD+A Sbjct: 127 NMGRLAVK--MPLLRPCTPRGVMIMLEHAGISVEGKHAVVIGQSNIVGRPMALELLMERATVTICHSRTRDLPEEVKRADIIVAAVGIPRFVKGDWVKPGAVVIDVGINRLEDG---------KLCGDVDFDAAKEHASWITPVPGGVGLMTVATLLANTLDAA 279
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_CHLT3 (Bifunctional protein folD OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=folD PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.693e-34 Identity = 78/167 (46.71%), Postives = 111/167 (66.47%), Query Frame = -1 Query: 163 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLP-TSLLLQR---HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDS 651 N+G L + + F+ CTP G IE+L R +E GK+ V++GRSNIVG P +L++Q+ + TV++ H+ T + T +ADI+IAA G A + G +K GAVV+DVG ++ + S GYRL+GDV +E A + AS ITPVPGGVGPMT++MLL+NT+ S Sbjct: 125 NVGRLVLGHLDKCFVSCTPFGIIEILKRYNIETKGKHCVIVGRSNIVGKPMANLMVQKLAYMNCTVTVCHSATPDIATYTKQADILIAAIGKARFITGDMIKAGAVVIDVGINRIEATNTKS---GYRLVGDVDFEAASQKASAITPVPGGVGPMTISMLLANTMKS 288
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_CALS8 (Bifunctional protein folD OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=folD PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.693e-34 Identity = 84/163 (51.53%), Postives = 109/163 (66.87%), Query Frame = -1 Query: 169 LNIGNLAMR-GREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTL 654 +N+G LA E PCTP G IELL R +EI GK+AVVIGRSNIVG P +LLL R +ATV+I H+ T++ + I ADI++AA G V +K GAVV+DVG ++ D + + +++GDV +E R+AS ITPVPGGVGPMTVAML+ NTL Sbjct: 115 MNVGMLATGIDFEYSIKPCTPFGVIELLKRENIEIKGKHAVVIGRSNIVGKPLALLLLRENATVTICHSYTRDLKDICKTADILVAAVGKPKFVTADMVKEGAVVIDVG-----INRDETTK---KIVGDVDFETVRRVASYITPVPGGVGPMTVAMLMKNTL 269
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_BACLD (Bifunctional protein folD OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=folD PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.693e-34 Identity = 79/167 (47.31%), Postives = 105/167 (62.87%), Query Frame = -1 Query: 154 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 654 LN+G + + E F+PCTP G +ELL ++ +++ GK VV+GRSNIVG P LL +ATV+ H+ T + T +ADI+I A G AN ++ +K GAVV+DVG +D +L GDV +EEA AS ITPVPGGVGPMT+ ML NT+ SAKR Sbjct: 125 LNVGKMLLG--EDTFLPCTPAGIVELLKKTEIDLSGKEVVVVGRSNIVGKPVGQLLLNENATVTYCHSRTADITAHTKKADILIVAVGKANFIKADQIKEGAVVIDVGVNRLD---------NGKLAGDVDFEEAKEKASYITPVPGGVGPMTITMLAHNTVKSAKR 280
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD2_PSESM (Bifunctional protein folD 2 OS=Pseudomonas syringae pv. tomato GN=folD2 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.693e-34 Identity = 77/166 (46.39%), Postives = 112/166 (67.47%), Query Frame = -1 Query: 154 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 651 N+G L+ +GR L PCTP GC+ LL + ++ GK+AVVIGRSNIVG P + LL + H +V++VH+ + + + + ADIV+AA G ++ WLKPGAVV+DVG +D + RL+GDV ++ A+ + S ITPVPGGVGPMT+A L+ NT+ +A++ Sbjct: 126 NVGGLS-QGRNVL-TPCTPSGCMHLLKETCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCQLADIVVAAVGRPRMIDAGWLKPGAVVIDVGINRID------DQGRSRLVGDVDFDNALDVVSAITPVPGGVGPMTIAFLMKNTVTAARQ 283
BLAST of CN188900 vs. ExPASy Swiss-Prot
Match: FOLD_POLNA (Bifunctional protein folD OS=Polaromonas naphthalenivorans (strain CJ2) GN=folD PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.823e-34 Identity = 74/156 (47.44%), Postives = 107/156 (68.59%), Query Frame = -1 Query: 154 EPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKR 621 +P F PCTP GC+++L G ++ GK+AVVIGRSNIVG P +L+L + +ATV+I H+ T + + +T +AD+++AA G N++R +KPGAVV+DVG + +L GDV ++ +A ITPVPGGVGPMT+ MLL NTL++A+R Sbjct: 134 QPGFWPCTPYGCMKMLESIGYDLRGKHAVVIGRSNIVGKPMALMLLQKNATVTICHSATADLKAMTLQADVIVAAVGKRNVLRADMVKPGAVVIDVGMNRNEEG---------KLCGDVDFDGVKEVAGYITPVPGGVGPMTITMLLVNTLEAAER 280 The following BLAST results are available for this feature:
BLAST of CN188900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188900 ID=CN188900; Name=CN188900; organism=Citrus sinensis; type=EST; length=654bpback to top |