CN182137
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBC5_YEAST (Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae GN=UBC5 PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 4.247e-41 Identity = 74/94 (78.72%), Postives = 86/94 (91.49%), Query Frame = -3 Query: 239 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYSM 520 IHFP DYPFKPPKV F TK++HPNINS+G+ICLDILK+QWSPALT+SKVLLSICSLL D NPDDPLVPEIA +YKTD+AKYE TA+ WT+KY++ Sbjct: 55 IHFPTDYPFKPPKVNFTTKIYHPNINSSGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAQIYKTDKAKYEATAKEWTKKYAV 148
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBC4_CANAL (Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 4.247e-41 Identity = 74/94 (78.72%), Postives = 84/94 (89.36%), Query Frame = -3 Query: 239 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYSM 520 IHFP DYP KPPK+A TK++HPNINSNG+ICLDILK+QWSPALTISKVLLSICSLL D NPDDPLVPEIAH+YK DR KYE TA+ WT+KY++ Sbjct: 54 IHFPTDYPLKPPKIALTTKIYHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAHIYKQDRKKYEATAKEWTKKYAV 147
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.614e-40 Identity = 75/95 (78.95%), Postives = 85/95 (89.47%), Query Frame = -3 Query: 236 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYSMG 520 I F DYPFKPPKV F+TKV+HPNI+S GSICLDILKEQWSPA T SKVLLSICSLL DPNP+DPLVPEIAH+YK D++KYE+TA+ WTQKY+MG Sbjct: 55 IDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYESTAQKWTQKYAMG 149
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 8.010e-40 Identity = 74/94 (78.72%), Postives = 82/94 (87.23%), Query Frame = -3 Query: 239 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYSM 520 I FP +YPFKPPKV F T+++HPN+NSNGSICLDIL+ QWSPALTISKVLLSI SLL DPNPDDPLVPEIA +YKTDR KY TAR WTQKY+M Sbjct: 54 IDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYAM 147
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 8.010e-40 Identity = 74/94 (78.72%), Postives = 82/94 (87.23%), Query Frame = -3 Query: 239 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYSM 520 I FP +YPFKPPKV F T+++HPN+NSNGSICLDIL+ QWSPALTISKVLLSI SLL DPNPDDPLVPEIA +YKTDR KY TAR WTQKY+M Sbjct: 54 IDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYAM 147
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UB2E2_MOUSE (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 3.604e-32 Identity = 64/93 (68.82%), Postives = 75/93 (80.65%), Query Frame = -3 Query: 242 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYS 520 I F PDYPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLL D NP DPLV IA Y T+RA+++ AR WT++Y+ Sbjct: 108 ITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 200
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 3.604e-32 Identity = 64/93 (68.82%), Postives = 75/93 (80.65%), Query Frame = -3 Query: 242 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYS 520 I F PDYPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLL D NP DPLV IA Y T+RA+++ AR WT++Y+ Sbjct: 108 ITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 200
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.049e-31 Identity = 63/93 (67.74%), Postives = 75/93 (80.65%), Query Frame = -3 Query: 242 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYS 520 I F P+YPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLL D NP DPLV IA Y T+RA+++ AR WT++Y+ Sbjct: 100 ITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 192
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.049e-31 Identity = 63/93 (67.74%), Postives = 75/93 (80.65%), Query Frame = -3 Query: 242 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYS 520 I F P+YPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLL D NP DPLV IA Y T+RA+++ AR WT++Y+ Sbjct: 100 ITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 192
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 3.051e-31 Identity = 62/93 (66.67%), Postives = 74/93 (79.57%), Query Frame = -3 Query: 242 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYS 520 IHF P+YPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLL D NP DPLV IA Y +R +++ AR WT++Y+ Sbjct: 139 IHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREEHDRIARLWTKRYA 231 The following BLAST results are available for this feature:
BLAST of CN182137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182137 ID=CN182137; Name=CN182137; organism=Citrus sinensis; type=EST; length=522bpback to top |