CN182137
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.766e-24 Identity = 50/94 (53.19%), Postives = 68/94 (72.34%), Query Frame = -3 Query: 239 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYSM 520 + P +YP PKV F TK++HPN++ G ICLDILK++WSPAL I VLLSI +LL PNPDDPL ++A +K++ A+ TAR+WT+ Y+M Sbjct: 56 LFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSNEAQAIETARAWTRLYAM 149
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.341e-23 Identity = 51/95 (53.68%), Postives = 66/95 (69.47%), Query Frame = -3 Query: 236 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYSMG 520 + P +YP PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL PNPDDPL IA +K++ A+ TA+ WT+ Y+ G Sbjct: 58 LFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYASG 152
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.341e-23 Identity = 51/95 (53.68%), Postives = 66/95 (69.47%), Query Frame = -3 Query: 236 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYSMG 520 + P +YP PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL PNPDDPL IA +K++ A+ TA+ WT+ Y+ G Sbjct: 58 LFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWTRLYASG 152
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 6.812e-23 Identity = 44/93 (47.31%), Postives = 68/93 (73.12%), Query Frame = -3 Query: 242 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYS 520 I FP DYPFKPPK+ F+T+++H N+++ G + ++IL++ WSPALTI+KVL +I S+ P P P +P IA +Y TDR K++ A+ WT +++ Sbjct: 89 IIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFA 181
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBCB_DICDI (Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum GN=ubcB PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.162e-22 Identity = 50/94 (53.19%), Postives = 65/94 (69.15%), Query Frame = -3 Query: 242 IHFPPDYPFKPPKVAFRTKVFHPNI-NSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYS 520 I P DYPFKPP + F TK++HPNI S+G+IC ++ WSP L I VL +I S+L DPNPD+PL EIA +KTDR + TA+ WT+KY+ Sbjct: 55 IDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVF-STWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKYA 147
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 1.518e-22 Identity = 49/88 (55.68%), Postives = 62/88 (70.45%), Query Frame = -3 Query: 242 DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYS 505 DYP PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL PNPDDPL ++A +KT+ + AR WT+ Y+ Sbjct: 61 DYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEHWKTNEKEAMARAREWTRLYA 148
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBC1_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC1 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 4.416e-22 Identity = 48/94 (51.06%), Postives = 63/94 (67.02%), Query Frame = -3 Query: 242 IHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYS 520 I P +YPFKPPK+ F TKV+HPNI+S G+ICLDILK WSP +T+ L+S+ +LL P P+DP E+A Y DR + TA WT+ Y+ Sbjct: 56 IEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYA 149
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBE2T_XENLA (Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 9.837e-22 Identity = 48/95 (50.53%), Postives = 67/95 (70.53%), Query Frame = -3 Query: 239 PPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK----EQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYSM 511 P YPF+PPK+ F T ++HPNI+S G ICLDILK W PAL IS VL SI L+ +PNPDDPL+ +I+ +K +RA + + A+ WT+K+++ Sbjct: 58 PERYPFEPPKIRFLTPIYHPNIDSAGRICLDILKLPPKGAWRPALNISTVLTSIQLLMSEPNPDDPLMADISSEFKYNRAVFFSNAKKWTEKHAL 152
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBC1_SCHPO (Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe GN=ubc1 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 1.285e-21 Identity = 46/100 (46.00%), Postives = 66/100 (66.00%), Query Frame = -3 Query: 224 IHFPPDYPFKPPKVAFRTKVFHPNINSN-GSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYSMG*EGL 520 I P DYPF+PPK+ F TK++HPN++S G+ICLDILK+QWSP T+ L+S+ SLL P P +P ++A +Y + ++ TAR WT Y+ G+ Sbjct: 57 IEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNYQQFVRTAREWTSSYAAAPAGV 156
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UE2NL_HUMAN (Putative ubiquitin-conjugating enzyme E2 N-like OS=Homo sapiens GN=UBE2NL PE=5 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.862e-21 Identity = 47/89 (52.81%), Postives = 63/89 (70.79%), Query Frame = -3 Query: 239 DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYSM 505 +YP PKV F TK++HPN++ I LDILK++WSPAL I VLLSI +LL PNPDDPL ++ +KT+ A+ TAR+WT+ Y+M Sbjct: 62 EYPMAAPKVRFMTKIYHPNVDKLERISLDILKDKWSPALQIRTVLLSIQALLNAPNPDDPLANDVVEQWKTNEAQAIETARAWTRLYAM 150 The following BLAST results are available for this feature:
BLAST of CN182137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN182137 ID=CN182137; Name=CN182137; organism=Citrus sinensis; type=EST; length=522bpback to top |