CN182137
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.862e-21 Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = -3 Query: 239 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYSM 520 + P +YP PP V F TK++HPN++ G ICL LK+ WSPAL I VLLSI +L+ PNPDDPL ++A ++K + + AR WT+KY++ Sbjct: 55 LFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIANAREWTKKYAV 148
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 4.882e-21 Identity = 46/93 (49.46%), Postives = 62/93 (66.67%), Query Frame = -3 Query: 242 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYS 520 ++ P DYP + PKV F TK++HPNI+ G ICLD+LK WSPAL I VLLSI +LL PNP+DPL ++A + + + AR WT+ Y+ Sbjct: 56 LYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYA 148
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBC27_ARATH (Ubiquitin carrier protein E2 27 OS=Arabidopsis thaliana GN=UBC27 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.376e-21 Identity = 48/94 (51.06%), Postives = 65/94 (69.15%), Query Frame = -3 Query: 242 IHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYS 520 I P YPF+PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+ L+SI +LL P P DP +A Y + + +TAR WT+ ++ Sbjct: 56 ITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKNYQVFVSTARYWTETFA 149
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.088e-20 Identity = 42/94 (44.68%), Postives = 65/94 (69.15%), Query Frame = -3 Query: 242 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ-WSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYS 520 + FP DYPF+PP + F T+++HPN +S G++CL ILK+Q + P++ + VL I LL +PNPDDPLV IA Y+ DR ++ AR + ++++ Sbjct: 60 LKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIARDYVEQFA 153
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UB2L3_PONAB (Ubiquitin-conjugating enzyme E2 L3 OS=Pongo abelii GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.423e-20 Identity = 41/93 (44.09%), Postives = 62/93 (66.67%), Query Frame = -3 Query: 245 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 520 I+FP +YPFKPPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y DR K+ A +T+KY Sbjct: 55 INFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UB2L3_MOUSE (Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus GN=Ube2l3 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.423e-20 Identity = 41/93 (44.09%), Postives = 62/93 (66.67%), Query Frame = -3 Query: 245 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 520 I+FP +YPFKPPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y DR K+ A +T+KY Sbjct: 55 INFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UB2L3_HUMAN (Ubiquitin-conjugating enzyme E2 L3 OS=Homo sapiens GN=UBE2L3 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.423e-20 Identity = 41/93 (44.09%), Postives = 62/93 (66.67%), Query Frame = -3 Query: 245 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 520 I+FP +YPFKPPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y DR K+ A +T+KY Sbjct: 55 INFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UB2L3_BOVIN (Ubiquitin-conjugating enzyme E2 L3 OS=Bos taurus GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.423e-20 Identity = 41/93 (44.09%), Postives = 62/93 (66.67%), Query Frame = -3 Query: 245 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 520 I+FP +YPFKPPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y DR K+ A +T+KY Sbjct: 55 INFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 3.165e-20 Identity = 47/94 (50.00%), Postives = 63/94 (67.02%), Query Frame = -3 Query: 242 IHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYS 520 I P YPF PPKV F TK++HPNI+S G+ICLDILK+QW+ A+T+ VLLS+ +LL PDDP +A+ YK + ++ TAR W Y+ Sbjct: 60 IKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 3.165e-20 Identity = 47/94 (50.00%), Postives = 63/94 (67.02%), Query Frame = -3 Query: 242 IHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYS 520 I P YPF PPKV F TK++HPNI+S G+ICLDILK+QW+ A+T+ VLLS+ +LL PDDP +A+ YK + ++ TAR W Y+ Sbjct: 60 IKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153 The following BLAST results are available for this feature:
BLAST of CN182137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182137 ID=CN182137; Name=CN182137; organism=Citrus sinensis; type=EST; length=522bpback to top |