CN182137
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 3.165e-20 Identity = 47/94 (50.00%), Postives = 63/94 (67.02%), Query Frame = -3 Query: 242 IHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYS 520 I P YPF PPKV F TK++HPNI+S G+ICLDILK+QW+ A+T+ VLLS+ +LL PDDP +A+ YK + ++ TAR W Y+ Sbjct: 60 IKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBE2T_BOVIN (Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.398e-20 Identity = 42/97 (43.30%), Postives = 65/97 (67.01%), Query Frame = -3 Query: 242 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYS 520 +H P YPF+PP++ F T ++HPNI+S G ICLD+L K W P+L I+ +L I L+ +PNPDDPL+ +I+ +K ++ + AR WT+K++ Sbjct: 55 VHIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTCIQQLMAEPNPDDPLMADISSEFKYNKPVFFKNARQWTEKHA 151
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBC37_ARATH (Probable ubiquitin carrier protein E2 37 OS=Arabidopsis thaliana GN=UBC37 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.050e-20 Identity = 47/97 (48.45%), Postives = 65/97 (67.01%), Query Frame = -3 Query: 242 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYS 520 I P YPF+PP V+F T ++HPNI+++G ICLDIL K W P+L IS VL S+ LL +PNPDD L+ E++ YK +R ++ AR T+KY+ Sbjct: 68 IQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYA 164
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.050e-20 Identity = 46/94 (48.94%), Postives = 61/94 (64.89%), Query Frame = -3 Query: 254 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSWT 520 + F DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A MY ++ +Y E +SWT Sbjct: 57 LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVREVVEQSWT 150
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBE2T_HUMAN (Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.571e-19 Identity = 43/94 (45.74%), Postives = 64/94 (68.09%), Query Frame = -3 Query: 242 PPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK----EQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYS 511 P YPF+PP++ F T ++HPNI+S G ICLD+LK W P+L I+ VL SI L+ +PNPDDPL+ +I+ +K ++ + AR WT+K++ Sbjct: 58 PERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHA 151
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.571e-19 Identity = 46/94 (48.94%), Postives = 59/94 (62.77%), Query Frame = -3 Query: 254 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTAR-----SWT 520 + F DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A MY + +Y R SWT Sbjct: 57 LQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWT 150
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 2.051e-19 Identity = 43/91 (47.25%), Postives = 60/91 (65.93%), Query Frame = -3 Query: 248 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQK 520 I F +YP KPP V F +KVFHPN+ ++G ICLDIL+ +WSP +S +L SI SLL DPNP+ P A +YK +R +YE ++ ++ Sbjct: 57 IEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEKRVKACVEQ 147
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.051e-19 Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = -3 Query: 278 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKY 520 +HF DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ VL SI SLL DPNPD P E A ++ ++ +Y Sbjct: 57 LHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREY 137
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.051e-19 Identity = 45/94 (47.87%), Postives = 61/94 (64.89%), Query Frame = -3 Query: 254 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSWT 520 + F DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A M+ ++ +Y E +SWT Sbjct: 57 LQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREVVEQSWT 150
BLAST of CN182137 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.679e-19 Identity = 45/94 (47.87%), Postives = 60/94 (63.83%), Query Frame = -3 Query: 254 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLFDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSWT 520 + F DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P E A M+ + +Y E +SWT Sbjct: 57 LQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVREVVEQSWT 150 The following BLAST results are available for this feature:
BLAST of CN182137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182137 ID=CN182137; Name=CN182137; organism=Citrus sinensis; type=EST; length=522bpback to top |