CN182135
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A1_SOLLC (Eukaryotic translation initiation factor 5A-1 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 5.452e-41 Identity = 59/62 (95.16%), Postives = 59/62 (95.16%), Query Frame = -1
Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596
KCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDLRLP
Sbjct: 57 KCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 118 HSP 2 Score: 62.7734 bits (151), Expect = 5.452e-41 Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = -2
Query: 287 TDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 409
TD+ LL+Q+KDGF GKDLV+SV AMGEEQI +KDIGPK
Sbjct: 119 TDDTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A1_TOBAC (Eukaryotic translation initiation factor 5A-1 OS=Nicotiana tabacum GN=EIF-5A1 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 7.104e-41 Identity = 59/62 (95.16%), Postives = 59/62 (95.16%), Query Frame = -1
Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596
KCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDLRLP
Sbjct: 57 KCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 118 HSP 2 Score: 62.3882 bits (150), Expect = 7.104e-41 Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = -2
Query: 287 TDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 409
TD+NLL+ IKDGF GKDLV+SV AMGEEQI +KD+GPK
Sbjct: 119 TDDNLLALIKDGFAEGKDLVLSVMSAMGEEQICGIKDVGPK 159
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A1_NICPL (Eukaryotic translation initiation factor 5A-1 OS=Nicotiana plumbaginifolia GN=EIF-5A1 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 7.104e-41 Identity = 59/62 (95.16%), Postives = 59/62 (95.16%), Query Frame = -1
Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596
KCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDLRLP
Sbjct: 57 KCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 118 HSP 2 Score: 62.3882 bits (150), Expect = 7.104e-41 Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = -2
Query: 287 TDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 409
TD+NLL+ IKDGF GKDLV+SV AMGEEQI +KD+GPK
Sbjct: 119 TDDNLLALIKDGFAEGKDLVLSVMSAMGEEQICGIKDVGPK 159
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A1_SOLTU (Eukaryotic translation initiation factor 5A-1/2 OS=Solanum tuberosum GN=EIF5A1 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 9.252e-41 Identity = 60/62 (96.77%), Postives = 60/62 (96.77%), Query Frame = -1
Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596
KCHFV IDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDLRLP
Sbjct: 57 KCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 118 HSP 2 Score: 59.6918 bits (143), Expect = 9.252e-41 Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = -2
Query: 287 TDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 409
TD+ LL+Q+K GFE GKDLV+SV AMGEEQI A+KDIG K
Sbjct: 119 TDDALLNQVKGGFEEGKDLVLSVMSAMGEEQICAVKDIGTK 159
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A1_ARATH (Eukaryotic translation initiation factor 5A-1 OS=Arabidopsis thaliana GN=At1g13950 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.572e-40 Identity = 55/63 (87.30%), Postives = 59/63 (93.65%), Query Frame = -1
Query: 408 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPN 596
KCHFV IDIF KKLEDIVPSSHNCDVPHV RTDYQLIDISEDG+VSLLT+NG+TKDDL+LPN
Sbjct: 56 KCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPN 118 HSP 2 Score: 66.6254 bits (161), Expect = 1.572e-40 Identity = 32/40 (80.00%), Postives = 34/40 (85.00%), Query Frame = -2
Query: 287 DENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 406
D+ LL QIK GF+ GKDLVVSV AMGEEQINALKDIGPK
Sbjct: 119 DDTLLQQIKSGFDDGKDLVVSVMSAMGEEQINALKDIGPK 158
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A4_SOLLC (Eukaryotic translation initiation factor 5A-4 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.667e-40 Identity = 59/62 (95.16%), Postives = 59/62 (95.16%), Query Frame = -1
Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596
KCHFV IDIFN KKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDLRLP
Sbjct: 57 KCHFVAIDIFNAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 118 HSP 2 Score: 60.4622 bits (145), Expect = 2.667e-40 Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = -2
Query: 287 TDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 409
TD+ LL+Q+K GFE GKDLV+SV AMGEEQI A+KDIG K
Sbjct: 119 TDDTLLNQVKGGFEEGKDLVLSVMSAMGEEQICAVKDIGTK 159
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A3_ARATH (Eukaryotic translation initiation factor 5A-3 OS=Arabidopsis thaliana GN=At1g69410 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.840e-38 Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = -1
Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596
KCHFV IDIF KKLEDIVPSSHNCDVPHV R DYQLIDISEDGFVSLLT+NG+TKDDL+LP
Sbjct: 56 KCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLP 117 HSP 2 Score: 62.7734 bits (151), Expect = 1.840e-38 Identity = 29/41 (70.73%), Postives = 36/41 (87.80%), Query Frame = -2
Query: 287 TDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 409
TDE LL+Q+K+GFE GKD+VVSV AMGEEQ+ ALK++GPK
Sbjct: 118 TDEALLTQLKNGFEEGKDIVVSVMSAMGEEQMCALKEVGPK 158
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A1_MEDSA (Eukaryotic translation initiation factor 5A-1 OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.122e-38 Identity = 55/63 (87.30%), Postives = 58/63 (92.06%), Query Frame = -1
Query: 411 KCHFVGIDIFNGKKLEDI-VPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596
KCHFV IDIF KKLE++ VPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDL+LP
Sbjct: 57 KCHFVAIDIFTSKKLEEVYVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLP 119 HSP 2 Score: 63.5438 bits (153), Expect = 3.122e-38 Identity = 32/41 (78.05%), Postives = 35/41 (85.37%), Query Frame = -2
Query: 287 TDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 409
TD++LL+QIKDGF GKDLVVSV AMGEEQI ALKDIG K
Sbjct: 120 TDDSLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGGK 160
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A_DIACA (Eukaryotic translation initiation factor 5A OS=Dianthus caryophyllus PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 4.397e-37 Identity = 53/62 (85.48%), Postives = 59/62 (95.16%), Query Frame = -1
Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596
KCHFV IDIFNGKKLEDIVPSSHNCDVPHV R DYQL+DI+EDGFVSLLT++G+TKDDL+LP
Sbjct: 57 KCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRVDYQLLDITEDGFVSLLTDSGDTKDDLKLP 118 HSP 2 Score: 57.3806 bits (137), Expect = 4.397e-37 Identity = 25/37 (67.57%), Postives = 33/37 (89.19%), Query Frame = -2
Query: 296 DENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDI 406
DE L+ Q+K+GFE+GKDL++SV CAMGEEQI A+KD+
Sbjct: 120 DEALVKQMKEGFEAGKDLILSVMCAMGEEQICAVKDV 156
BLAST of CN182135 vs. ExPASy Swiss-Prot
Match: IF5A2_ARATH (Eukaryotic translation initiation factor 5A-2 OS=Arabidopsis thaliana GN=At1g26630 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.225e-33 Identity = 52/62 (83.87%), Postives = 56/62 (90.32%), Query Frame = -1
Query: 411 KCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLP 596
KCHFV IDIF KKLEDIVPSSHNCDVPHV R DYQLIDI+EDGFVSLLT++G TKDDL+LP
Sbjct: 56 KCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLP 117 HSP 2 Score: 50.0618 bits (118), Expect = 1.225e-33 Identity = 22/39 (56.41%), Postives = 32/39 (82.05%), Query Frame = -2
Query: 293 TDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIG 409
TD+ L +Q++ GF+ GKD+VVSV +MGEEQI A+K++G
Sbjct: 118 TDDGLTAQMRLGFDEGKDIVVSVMSSMGEEQICAVKEVG 156 The following BLAST results are available for this feature:
BLAST of CN182135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182135 ID=CN182135; Name=CN182135; organism=Citrus sinensis; type=EST; length=596bpback to top |