CN182133

Overview
NameCN182133
Unique NameCN182133
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN182133_ssr584 microsatellite CN182133_ssr584:584..593. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2307 contig Csv1_Contig2307:1..724. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN182133 vs. ExPASy Swiss-Prot
Match: CIPK5_ARATH (CBL-interacting serine/threonine-protein kinase 5 OS=Arabidopsis thaliana GN=CIPK5 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.236e-21
Identity = 57/134 (42.54%), Postives = 76/134 (56.72%), Query Frame = -2
Query:  288 ESKNELAKPCNLNAFDIIS-FSAGFDLSGLFXXXXXXXEVRFTSNKPVSTIISKLEGIAXXXXXXXXXXXXXXXKIEGSKEGRKGVLGMDAEIFEITPFFHLVEVKKSSGDTLEYQKVMNQEIRPALKDIVWTW 686
            E++ E   P   NAF+ IS  S+GFDLS LF        V FTS    + ++ K+E +                K+EG  EGRKG L M AE+FE+ P   +VE  KS+GDTLEY ++  +E+RPAL DIVW+W
Sbjct:  301 ENQTEPISPKFFNAFEFISSMSSGFDLSSLFESKRKVQSV-FTSRSSATEVMEKIETVTKEMNMKVKRTKDFKVKMEGKTEGRKGRLSMTAEVFEVAPEISVVEFCKSAGDTLEYDRLYEEEVRPALNDIVWSW 433          
BLAST of CN182133 vs. ExPASy Swiss-Prot
Match: CIPKP_ARATH (CBL-interacting serine/threonine-protein kinase 25 OS=Arabidopsis thaliana GN=CIPK25 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.739e-20
Identity = 57/140 (40.71%), Postives = 79/140 (56.43%), Query Frame = -2
Query:  288 STSTVAESKNELAKPCNLNAFDIIS-FSAGFDLSGLFXXXXXXXEVRFTSNKPVSTIISKLEGIAXXXXXXXXXXXXXXXKIEGSKEGRKGVLGMDAEIFEITPFFHLVEVKKSSGDTLEYQKVMNQEIRPALKDIVWTW 704
            +T+T A +      P   NAF+ IS  S+GFDLS LF        + FTS    S I+ KLEGI                K+ G  EGRKG + + AE+FE+ P   +VE+ KS+GDTLEY ++  + +RPAL++IVW+W
Sbjct:  324 TTATTATTTTTPVSPKFFNAFEFISSMSSGFDLSSLFESKRKLRSM-FTSRWSASEIMGKLEGIGKEMNMKVKRTKDFKVKLFGKTEGRKGQIAVTAEVFEVAPEVAVVELCKSAGDTLEYNRLYEEHVRPALEEIVWSW 462          
BLAST of CN182133 vs. ExPASy Swiss-Prot
Match: CIPKF_ARATH (CBL-interacting serine/threonine-protein kinase 15 OS=Arabidopsis thaliana GN=CIPK15 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.775e-19
Identity = 58/134 (43.28%), Postives = 75/134 (55.97%), Query Frame = -2
Query:  288 AESKNELAKPCNLNAFDIISFSAGFDLSGLFXXXXXXXEVRFTSNKPVSTIISKLEGIAXXXXXXXXXXXXXXXKIEGSKEGRKGVLGMDAEIFEITPFFHLVEVKKSSGDTLEYQKVMNQEIRPALKDIVWTW 689
            A ++ E  +  NLNAF+IIS S GFDLSGLF       E+RFTSN+  S I  KL  I                 ++ S E       ++AE+FEI P +H+V +KKS GDT EY++VM + IRPAL D V  W
Sbjct:  292 ASAEKEKKRCINLNAFEIISLSTGFDLSGLFEKGEEKEEMRFTSNREASEITEKLVEIGKDLKMKVRKKEHEWR-VKMSAEATV----VEAEVFEIAPSYHMVVLKKSGGDTAEYKRVMKESIRPALIDFVLAW 420          
BLAST of CN182133 vs. ExPASy Swiss-Prot
Match: CIPKG_ARATH (CBL-interacting serine/threonine-protein kinase 16 OS=Arabidopsis thaliana GN=CIPK16 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.151e-18
Identity = 55/134 (41.04%), Postives = 74/134 (55.22%), Query Frame = -2
Query:  288 ESKNELAKPCNLNAFDII-SFSAGFDLSGLFXXXXXXXEVRFTSNKPVSTIISKLEGIAXXXXXXXXXXXXXXXKIEGSKEGRKGVLGMDAEIFEITPFFHLVEVKKSSGDTLEYQKVMNQEIRPALKDIVWTW 686
            E +++ A P + NAF  I S S+GFDLS LF        + FTS  P  ++  +LE  A               K++   EGRKG L + AE+FE+ P   +VE  K+SGDTLEY      ++RPALKDIVW+W
Sbjct:  311 EKEDDGASPRSFNAFQFITSMSSGFDLSNLFEIKRKPKRM-FTSKFPAKSVKERLETAAREMDMRVKHVKDCKMKLQRRTEGRKGRLSVTAEVFEVAPEVSVVEFCKTSGDTLEYYLFCEDDVRPALKDIVWSW 443          
BLAST of CN182133 vs. ExPASy Swiss-Prot
Match: CIPK6_ORYSJ (CBL-interacting protein kinase 6 OS=Oryza sativa subsp. japonica GN=CIPK6 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.711e-18
Identity = 56/147 (38.10%), Postives = 81/147 (55.10%), Query Frame = -2
Query:  294 PSGSTSTVAESKNELAKPCNLNAFDIISFSAGFDLSGLFXXXXXXXE----VRFTSNKPVSTIISKLEGIAXXXXXXXXXXXXXXXKI--EGSKEG-RKGVLGMDAEIFEITPFFHLVEVKKSSGDTLEYQKVMNQEIRPALKDIVW 713
            P+ +    A+ + E  +P  LNAF +IS S GFDLS LF            + F + +P S +IS+LEG+A                +  EG++ G  KG L + A+IF + P   +V+VKK  GDTLEY+   ++E+RPAL+DIVW
Sbjct:  293 PAFADPAPAKEEAEKDEPETLNAFHLISLSEGFDLSPLFEGDSAKGRRDGGMLFATREPASGVISRLEGVAARGGGRMRVTKSGARGVRLEGAERGGAKGRLAVAADIFSVAPSVLVVDVKKDGGDTLEYRSFCSEELRPALQDIVW 439          
BLAST of CN182133 vs. ExPASy Swiss-Prot
Match: CIPKD_ARATH (CBL-interacting serine/threonine-protein kinase 13 OS=Arabidopsis thaliana GN=CIPK13 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.272e-17
Identity = 60/146 (41.10%), Postives = 81/146 (55.48%), Query Frame = -2
Query:  297 SGSTSTVAESKNE--------LAKPCNLNAFDIISFSAGFDLSGLFXXXXXXXEVRFTSNKPVSTIISKLEGIAXXXXXXXXXXXXXXXKIEGSKEGRKGVLGMDAEIFEITPFFHLVEVKKSSGDTLEYQKVMNQEIRPALKDIV 710
            SG +ST +E   E        + +P +LNAFDI+SFS   DLSGLF         RF S  P++ IISKLE IA                +EG +EG KG L +  EIFE+TP   +VEVKK  G+  EY++  N+E+RP L+ ++
Sbjct:  344 SGRSSTASEGDAEFDIKRVDSMPRPASLNAFDILSFS---DLSGLFEEGGQG--ARFVSAAPMTKIISKLEEIAKEVKFMVRKKDWSVR-LEGCREGAKGPLTIRVEIFELTPSLVVVEVKKKGGNIEEYEEFCNKELRPQLEKLM 483          
BLAST of CN182133 vs. ExPASy Swiss-Prot
Match: CIPKD_ORYSJ (Putative CBL-interacting protein kinase 13 OS=Oryza sativa subsp. japonica GN=CIPK13 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.134e-16
Identity = 48/132 (36.36%), Postives = 69/132 (52.27%), Query Frame = -2
Query:  297 NLNAFDIISFSAGFDLSGLFXXXXXXXE------------VRFTSNKPVSTIISKLEGIAXXXXXXXXXXXXXXXKIEGSKEGRKGVLGMDAEIFEITPFFHLVEVKKSSGDTLEYQKVMNQEIRPALKDIV 656
            +LNAFDIISFS GFDLSGLF                     RF S  PV  I++ LE  A                +EG++EG  G L + AEI+E+TP   +VEV++ +G   EY++     ++P+L+++V
Sbjct:  363 SLNAFDIISFSPGFDLSGLFDQDDGGGAGAGSIPEQQKHTARFVSAAPVEVIVATLEAAAAAAGMAVREREDGSISMEGTREGEHGALAVAAEIYELTPELVVVEVRRKAGGAAEYEEFFRARLKPSLRELV 494          
BLAST of CN182133 vs. ExPASy Swiss-Prot
Match: CIPKN_ORYSJ (CBL-interacting protein kinase 23 OS=Oryza sativa subsp. japonica GN=CIPK23 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.118e-16
Identity = 53/147 (36.05%), Postives = 78/147 (53.06%), Query Frame = -2
Query:  294 VFSPSGS-TSTVAESKNELAKPCNLNAFDIISFSAGFDLSGLFXXXXXXXE---VRFTSNKPVSTIISKLEGIAXXXXXXXXXXXXXXXKIEGSKEGRKGVLGMDAEIFEITPFFHLVEVKKSSGDTLEYQKVMNQEIRPALKDIVW 722
            +F+ SG  T  V E + E  +P  +NAF++IS S G +L  LF            RF S  P + I+SK+E  A                ++G   GRKG L +  E+FE+TP  ++VE++KS+GDTLE+ K  +  I   LKD++W
Sbjct:  290 IFNESGDQTQLVVERREE--RPSVMNAFELISTSQGLNLGTLFEKQSQGSVKRETRFASRLPANEILSKIEAAAGPMGFNVQKRNYKLK-LQGENPGRKGQLAIATEVFEVTPSLYMVELRKSNGDTLEFHKFYH-NISNGLKDVMW 432          
BLAST of CN182133 vs. ExPASy Swiss-Prot
Match: CIPK9_ARATH (CBL-interacting serine/threonine-protein kinase 9 OS=Arabidopsis thaliana GN=CIPK9 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.118e-16
Identity = 52/141 (36.88%), Postives = 74/141 (52.48%), Query Frame = -2
Query:  294 SGSTSTVAESKNELAKPCNLNAFDIISFSAGFDLSGLFXXXXXXXE--VRFTSNKPVSTIISKLEGIAXXXXXXXXXXXXXXXKIEGSKEGRKGVLGMDAEIFEITPFFHLVEVKKSSGDTLEYQKVMNQEIRPALKDIVW 710
            S S   +   K E  KP ++NAF++IS S+ F L  LF       +   RFTS +  S I+SK+E  A                ++G K GRKG L +  E+FE+ P  H+VE++K+ GDTLE+ K   +     LKD+VW
Sbjct:  300 SNSKECLVTEKKE--KPVSMNAFELISSSSEFSLENLFEKQAQLVKKETRFTSQRSASEIMSKMEETAKPLGFNVRKDNYKIK-MKGDKSGRKGQLSVATEVFEVAPSLHVVELRKTGGDTLEFHK-FYKNFSSGLKDVVW 436          
BLAST of CN182133 vs. ExPASy Swiss-Prot
Match: CIPKN_ARATH (CBL-interacting serine/threonine-protein kinase 23 OS=Arabidopsis thaliana GN=CIPK23 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.191e-15
Identity = 50/147 (34.01%), Postives = 75/147 (51.02%), Query Frame = -2
Query:  294 VFSPSGSTSTVAESKNE--LAKPCNLNAFDIISFSAGFDLSGLFXXXXXXXE--VRFTSNKPVSTIISKLEGIAXXXXXXXXXXXXXXXKIEGSKEGRKGVLGMDAEIFEITPFFHLVEVKKSSGDTLEYQKVMNQEIRPALKDIVW 722
            +F  SG +  +   + E  L  P  +NAF++IS S G +L  LF       +   RFTS    + I++K+E  A                + G K GRKG L +  E+F++ P  ++VE++KS GDTLE+ K   + +   LKDIVW
Sbjct:  308 IFDDSGESKNLVVERREEGLKTPVTMNAFELISTSQGLNLGSLFEKQMGLVKRKTRFTSKSSANEIVTKIEAAAAPMGFDVKTNNYKMK-LTGEKSGRKGQLAVATEVFQVAPSLYMVEMRKSGGDTLEFHK-FYKNLTTGLKDIVW 452          
The following BLAST results are available for this feature:
BLAST of CN182133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
CIPK5_ARATH3.236e-2142.54CBL-interacting serine/threonine-protein kinase 5 ... [more]
CIPKP_ARATH2.739e-2040.71CBL-interacting serine/threonine-protein kinase 25... [more]
CIPKF_ARATH1.775e-1943.28CBL-interacting serine/threonine-protein kinase 15... [more]
CIPKG_ARATH1.151e-1841.04CBL-interacting serine/threonine-protein kinase 16... [more]
CIPK6_ORYSJ5.711e-1838.10CBL-interacting protein kinase 6 OS=Oryza sativa s... [more]
CIPKD_ARATH1.272e-1741.10CBL-interacting serine/threonine-protein kinase 13... [more]
CIPKD_ORYSJ3.134e-1636.36Putative CBL-interacting protein kinase 13 OS=Oryz... [more]
CIPKN_ORYSJ9.118e-1636.05CBL-interacting protein kinase 23 OS=Oryza sativa ... [more]
CIPK9_ARATH9.118e-1636.88CBL-interacting serine/threonine-protein kinase 9 ... [more]
CIPKN_ARATH1.191e-1534.01CBL-interacting serine/threonine-protein kinase 23... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0002A01_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182133 ID=CN182133; Name=CN182133; organism=Citrus sinensis; type=EST; length=723bp
GAGGGTTTGATTGAACAGAAATGCACGAAAACAAGGGCACATACTACATA
ATCTAACAATAATTTAGGTCCATATGCCTTAACACACCCGTTAAAGACAA
AGCAGTGAGACATCTCATACTGCACTTGTCAGGACACAACAGATAAGAGA
AATTACTCTAAACCATAAAATTCCTATGAGTCTTGAGGAGGGGCAATAGG
CAATGGGTGTGCATCGCAAGGCGGTAGCTCCTGTTGCTCCGGCAATGGTG
CTACTTGTTCCTGGCATTGCTGGCGCTGCTCTCCTTGCCAAGTCCAAACT
ATGTCCTTGAGAGCCGGTCTTATTTCTTGATTCATCACCTTCTGGTACTC
CAGTGTATCTCCACTGCTCTTTTTCACCTCCACCAAGTGAAAAAATGGAG
TGATTTCAAAGATTTCTGCATCCATGCCCAACACTCCTTTCCTGCCTTCC
TTGGAGCCTTCAATTTTCAGCAACCCTCCGTCTTTCTTCTTCACTTTTAG
CCTGAGAAGCTTAGCAATACCTTCCAGCTTCGAGATGATGGTTGAAACAG
GCTTATTGGATGTAAATCGCACTTCCTTCCTTTTCTCTCTCTCCTCAAAT
AAGCCAGACAAGTCAAAGCCTGCAGAGAAGGAGATGATATCAAATGCATT
CAAGTTGCAAGGCTTTGCCAATTCATTCTTTGACTCTGCAACAGTACTGG
TACTTCCACTTGGACTAAAAACT
back to top