CN188898
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188898 vs. ExPASy Swiss-Prot
Match: RAB6B_CAEEL (Ras-related protein Rab-6.2 OS=Caenorhabditis elegans GN=rab-6.2 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.086e-37 Identity = 79/192 (41.15%), Postives = 115/192 (59.90%), Query Frame = -1 Query: 208 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV--QPAPNPSGMVLMDRPGER---TASASC 768 KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER+ SL P Y R + A++VYDITN SF + KW+ +++ + ++++ L GNK DL D R+VT +E + A+E + F+ETSAK NV +F IA LP + P +V MD +R T SC Sbjct: 12 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGALPGIIKDDPVEPPNVVTMDPIRQRQIVTDEGSC 203
BLAST of CN188898 vs. ExPASy Swiss-Prot
Match: YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.056e-36 Identity = 73/156 (46.79%), Postives = 106/156 (67.95%), Query Frame = -1 Query: 301 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEI 768 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDIT +FE ++W++EL+ + N+V+ L GNK+DL R V E AQA+ + GL F+ETSA +TNV F +I Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQI 169
BLAST of CN188898 vs. ExPASy Swiss-Prot
Match: RB11B_RAT (Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2 SV=4) HSP 1 Score: 153.68 bits (387), Expect = 1.056e-36 Identity = 72/163 (44.17%), Postives = 111/163 (68.10%), Query Frame = -1 Query: 280 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 768 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++N L F+ETSA +TNV + F I + R+ Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
BLAST of CN188898 vs. ExPASy Swiss-Prot
Match: RB11B_MOUSE (Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3) HSP 1 Score: 153.68 bits (387), Expect = 1.056e-36 Identity = 72/163 (44.17%), Postives = 111/163 (68.10%), Query Frame = -1 Query: 280 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 768 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++N L F+ETSA +TNV + F I + R+ Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
BLAST of CN188898 vs. ExPASy Swiss-Prot
Match: RB11B_HUMAN (Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4) HSP 1 Score: 153.68 bits (387), Expect = 1.056e-36 Identity = 72/163 (44.17%), Postives = 111/163 (68.10%), Query Frame = -1 Query: 280 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 768 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++N L F+ETSA +TNV + F I + R+ Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
BLAST of CN188898 vs. ExPASy Swiss-Prot
Match: RB11B_BOVIN (Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3) HSP 1 Score: 153.68 bits (387), Expect = 1.056e-36 Identity = 72/163 (44.17%), Postives = 111/163 (68.10%), Query Frame = -1 Query: 280 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 768 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++N L F+ETSA +TNV + F I + R+ Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
BLAST of CN188898 vs. ExPASy Swiss-Prot
Match: RAB6_DICDI (Ras-related protein Rab-6 OS=Dictyostelium discoideum GN=rab6 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.056e-36 Identity = 73/163 (44.79%), Postives = 108/163 (66.26%), Query Frame = -1 Query: 280 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 768 KLV LGD GK+S++ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER+ SL P Y R ++ AI+VYDITN+ SF KW+++++ + N+V+ L GNK DL D R+V+ EE +A A+E + F ETSAK N+ +F ++A LP + Sbjct: 8 KLVFLGDQSVGKTSIITRFMYDTFDITYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIVVYDITNKVSFTNTIKWIEDVRNERGNNVVIMLVGNKTDLADKRQVSIEEGEAKAKEYDIMFTETSAKAGFNIKALFRKVASALPGI 170
BLAST of CN188898 vs. ExPASy Swiss-Prot
Match: RAB2_LYMST (Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.056e-36 Identity = 72/160 (45.00%), Postives = 105/160 (65.62%), Query Frame = -1 Query: 289 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 768 K +++GD G GKS L+L+F +F + TIG F ++ + ++ +K +IWDTAGQE + S+ YYRGAA A++VYDIT + +F W+++ + N NMV+ L GNK+DL R+V EE +A+A+E+GL FMETSAKTA NV + F AK + Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEI 167
BLAST of CN188898 vs. ExPASy Swiss-Prot
Match: RAB2A_RAT (Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.056e-36 Identity = 71/160 (44.38%), Postives = 106/160 (66.25%), Query Frame = -1 Query: 289 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 768 K +++GD G GKS L+L+F +F + T+G F ++ + ++ +K +IWDTAGQE + S+ YYRGAA A++VYDIT + +F W+++ + N NMV+ L GNK+DL R+V EE +A+A+E+GL FMETSAKTA+NV + F AK + Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
BLAST of CN188898 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 153.68 bits (387), Expect = 1.056e-36 Identity = 82/207 (39.61%), Postives = 124/207 (59.90%), Query Frame = -1 Query: 202 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNV--------NDIFYEIAKRLPRVQPAPNPSGMVLMDRPGERT----------ASASCCS 768 K+VL+GD G GKS+++ RF + +F +STIG F ++T V T+K +IWDTAGQERY ++ YYRGA A++VYDIT + +F+ +W++EL+ + N+V+ +AGNK+DL R V E+ Q+ A++ GL F+ETSA ATNV +I++ I+K+ Q A + + PG+ T A +CCS Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKALAAQEAAAANSAI----PGQGTTINVDDTSGGAKRACCS 216 The following BLAST results are available for this feature:
BLAST of CN188898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188898 ID=CN188898; Name=CN188898; organism=Citrus sinensis; type=EST; length=768bpback to top |