CN182123
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182123 vs. ExPASy Swiss-Prot
Match: FPPS_KLULA (Farnesyl pyrophosphate synthetase OS=Kluyveromyces lactis GN=FPS1 PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.243e-50 Identity = 103/187 (55.08%), Postives = 134/187 (71.66%), Query Frame = 2 Query: 107 MSDLKSRFIEVYGVLKQELLNDPA-FEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGK---ELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEAEKDLSKYSLPLH 655 MSD +++F+EV+ L QEL + A + ++ +W ++ L+YN PGGKLNRGLSVVD+Y LLK K EL+ +E+ + LGWCIE LQAYFLV DD+MD S TRRGQPCW++V VG IA ND +L I +LK HFR +PYYVDLL+LF++V FQT GQ++DLIT E + DLSK+SL H Sbjct: 1 MSDNRAQFLEVFPSLVQELRDILAGYGMPEEAIEWYEKSLNYNTPGGKLNRGLSVVDTYALLKGYKSVSELSAEEYKKVAILGWCIELLQAYFLVADDMMDQSITRRGQPCWYKVENVGDIAINDAFMLEGAIYCLLKKHFRTEPYYVDLLELFHDVTFQTELGQLLDLITAPEDKVDLSKFSLEKH 187
BLAST of CN182123 vs. ExPASy Swiss-Prot
Match: FPPS_YEAST (Farnesyl pyrophosphate synthetase OS=Saccharomyces cerevisiae GN=FPP1 PE=1 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 3.206e-46 Identity = 94/182 (51.65%), Postives = 128/182 (70.33%), Query Frame = 2 Query: 119 KSRFIEVYGVLKQEL-LNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLL--KEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEAEKDLSKYSLPLH 655 + RF+ V+ L +EL + A+ ++ W L+YN PGGKLNRGLSVVD+Y +L K ++L +E+ + LGWCIE LQAYFLV DD+MD S TRRGQPCW++VP+VG IA ND +L I ++LK+HFR++ YY+D+ +LF+EV FQT GQ++DLIT E + DLSK+SL H Sbjct: 9 RERFLNVFPKLVEELNASLLAYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSNKTVEQLGQEEYEKVAILGWCIELLQAYFLVADDMMDKSITRRGQPCWYKVPEVGEIAINDAFMLEAAIYKLLKSHFRNEKYYIDITELFHEVTFQTELGQLMDLITAPEDKVDLSKFSLKKH 190
BLAST of CN182123 vs. ExPASy Swiss-Prot
Match: FPPS_SCHPO (Farnesyl pyrophosphate synthetase OS=Schizosaccharomyces pombe GN=fps1 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.476e-39 Identity = 82/182 (45.05%), Postives = 113/182 (62.09%), Query Frame = 2 Query: 113 DLKSRFIEVYGVLKQELLND-PAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEAEKDLSKYSLPLH 655 D +++F V E++N D +W L +N GGK NRGLSV+DSY +L G L + + ++ LGW +E LQ++FL+ DDIMD S TRRGQPCW+ +P VG IA ND ++ + I +LK HFR + YVDL++LF++V FQT GQ +DL+T E DLSK+SL H Sbjct: 5 DKRAKFESALPVFVDEIVNYLKTINIPDDVTEWYKNSLFHNTLGGKYNRGLSVIDSYEILL-GHPLDEAAYMKAAVLGWMVELLQSFFLIADDIMDASKTRRGQPCWYLMPGVGNIAINDAFMVESAIYFLLKKHFRQESCYVDLIELFHDVTFQTELGQQLDLLTAPEDSVDLSKFSLQKH 185
BLAST of CN182123 vs. ExPASy Swiss-Prot
Match: FPPS_NEUCR (Farnesyl pyrophosphate synthetase OS=Neurospora crassa GN=fpp PE=3 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 2.461e-38 Identity = 85/182 (46.70%), Postives = 116/182 (63.74%), Query Frame = 2 Query: 104 KMSDLKSRFIEVYGVLKQELLN-DPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEAEKDLSKYSL 646 K + LK F V+ L++ LL A++ W + L+ N GGK NRG+SV DS +L G+ LT++E+F ++ LGW E LQA+FLV DDIMD S TRRG+PCW+R VGM+A ND +L + I +LK +FR P YVD L+LF+EV FQT GQ+ DL+T E + DL +S+ Sbjct: 3 KTTTLKE-FESVFPKLEEALLEYAKAYKLPEQMLSWYKQSLEVNTLGGKCNRGMSVPDSASILL-GRPLTEEEYFQAATLGWMTELLQAFFLVSDDIMDSSITRRGKPCWYRQEGVGMVAINDAFMLESAIYTLLKKYFRSHPRYVDFLELFHEVTFQTEMGQLCDLLTAPEDKVDLDNFSM 182
BLAST of CN182123 vs. ExPASy Swiss-Prot
Match: FPPS_GIBFU (Farnesyl pyrophosphate synthetase OS=Gibberella fujikuroi GN=FPPS PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.160e-38 Identity = 83/174 (47.70%), Postives = 111/174 (63.79%), Query Frame = 2 Query: 128 FIEVYGVLKQELLNDP-AFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEAEKDLSKYSL 646 F VY L++ LL+ +++ + W R L+ N GGK NRG+SV DS LL E K LT++++F ++ LGW E LQA+FLV DDIMD S TRRGQPCW+R VGMIA ND +L + I +LK +FR P Y DL++ F+E FQT GQ+ DL+T E +L +SL Sbjct: 10 FNSVYPKLEEALLDHARSYKLPQEQLDWYKRSLEVNPLGGKCNRGMSVPDSVSLLLE-KPLTEEQYFQAATLGWMTELLQAFFLVSDDIMDSSITRRGQPCWYRQEGVGMIAINDAFMLESAIYTLLKKYFRSHPAYFDLIESFHETTFQTELGQLCDLLTAPEDNVNLDNFSL 182
BLAST of CN182123 vs. ExPASy Swiss-Prot
Match: FPPS_RAT (Farnesyl pyrophosphate synthetase OS=Rattus norvegicus GN=Fdps PE=2 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 2.547e-35 Identity = 74/172 (43.02%), Postives = 113/172 (65.70%), Query Frame = 2 Query: 128 FIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEAEKDLSKYS 643 F ++ VL ++ L P D+ + +L+YN GGK NRGL+VV +++ L E ++ + + +GWC+E LQA+FLVLDDIMD S+TRRGQ CW++ P +G+ A ND +LL I R+LK + R++PYY++LL+LF + +QT GQ +DLIT + + DL +Y+ Sbjct: 21 FSQIVKVLTEDELGHPE---KGDAITRIKEVLEYNTVGGKYNRGLTVVQTFQELVEPRKQDAESLQRALTVGWCVELLQAFFLVLDDIMDSSYTRRGQICWYQKPGIGLDAINDALLLEAAIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLITAPQGQVDLGRYT 189
BLAST of CN182123 vs. ExPASy Swiss-Prot
Match: FPPS_BOVIN (Farnesyl pyrophosphate synthetase OS=Bos taurus GN=FDPS PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.651e-34 Identity = 75/177 (42.37%), Postives = 110/177 (62.15%), Query Frame = 2 Query: 113 DLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEAEKDLSKYS 643 D F ++ VL +E + P D+ + +L+YN GGK NRGL+VV ++R L E + D + +GWC+E LQA+FLV DDIMD S TRRGQ CW++ P +G+ A ND LL + I R+LK + R++PYY+DL++LF + +QT GQ +DLIT + DL +++ Sbjct: 16 DFIQHFSQIVKVLTEEDIGHPEIG---DAITRLKEVLEYNAIGGKYNRGLTVVITFRELVEPGKQDPDSLQRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQTCWYQKPGIGLDAINDAFLLESSIYRLLKLYCREQPYYLDLIELFLQSSYQTEIGQTLDLITAPQGNVDLGRFT 189
BLAST of CN182123 vs. ExPASy Swiss-Prot
Match: FPPS_CHICK (Farnesyl pyrophosphate synthetase OS=Gallus gallus GN=FDPS PE=1 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 4.803e-34 Identity = 72/142 (50.70%), Postives = 95/142 (66.90%), Query Frame = 2 Query: 218 MLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEAEKDLSKYS 643 +L YN PGGK NRGL+VV +YR L + + + A+GWCIE QA+FLV DDIMD S TRRGQ CW++ VG+ A ND LL + + R+LK + R +PYYV LL+LF + +QT GQM+DLIT ++ DLS +S Sbjct: 62 VLQYNAPGGKCNRGLTVVAAYRELSGPGQKDAESLRCALAVGWCIELFQAFFLVADDIMDQSLTRRGQLCWYKKEGVGLDAINDSFLLESSVYRVLKKYCRQRPYYVHLLELFLQTAYQTELGQMLDLITAPVSKVDLSHFS 203
BLAST of CN182123 vs. ExPASy Swiss-Prot
Match: FPPS_MOUSE (Farnesyl pyrophosphate synthetase OS=Mus musculus GN=Fdps PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.397e-33 Identity = 73/172 (42.44%), Postives = 110/172 (63.95%), Query Frame = 2 Query: 128 FIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEAEKDLSKYS 643 F ++ VL ++ L P D+ + +L+YN GGK NRGL+VV +++ L E K+ + + +GWC+E LQA+FLV DDIMD S TRRGQ CW++ P +G+ A ND +LL I R+LK + R++PYY++LL+LF + +QT GQ +DL+T + DL +Y+ Sbjct: 21 FSQIVKVLTEKELGHPEIG---DAIARLKEVLEYNALGGKYNRGLTVVQAFQELVEPKKQDAESLQRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQICWYQKPGIGLDAINDALLLEASIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLMTAPQGHVDLGRYT 189
BLAST of CN182123 vs. ExPASy Swiss-Prot
Match: FPPS_HUMAN (Farnesyl pyrophosphate synthetase OS=Homo sapiens GN=FDPS PE=1 SV=4) HSP 1 Score: 140.198 bits (352), Expect = 9.057e-33 Identity = 73/177 (41.24%), Postives = 110/177 (62.15%), Query Frame = 2 Query: 113 DLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEAEKDLSKYS 643 D F ++ VL ++ + P D+ + +L+YN GGK NRGL+VV ++R L E ++ D + +GWC+E LQA+FLV DDIMD S TRRGQ CW++ P VG+ A ND LL I R+LK + R++PYY++L++LF + +QT GQ +DL+T + DL +++ Sbjct: 82 DFVQHFSQIVRVLTEDEMGHPEIG---DAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFT 255 The following BLAST results are available for this feature:
BLAST of CN182123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182123 ID=CN182123; Name=CN182123; organism=Citrus sinensis; type=EST; length=658bpback to top |