CN188892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: RGL2_ARATH (DELLA protein RGL2 OS=Arabidopsis thaliana GN=RGL2 PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 5.067e-23 Identity = 75/207 (36.23%), Postives = 102/207 (49.28%), Query Frame = 2 Query: 155 YDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPD-ETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 Y+ P AN AILEA TT + ++HVID + QG Q+ L AL+ R G P+ T + + L+ + KL+Q A+ +GV F DL + P+ ETL VN F+L R+ S S E +LL VK + PS+VT+VEQE N N F+ R NEA YY +LFDS+E + DR Sbjct: 259 YESCPYLKFAHFTANQAILEAV---TT-----ARRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGIGPPQTENSDSLQQLGWKLAQFAQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARSGSIE----KLLNTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDR 453
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCL11_ARATH (Scarecrow-like protein 11 OS=Arabidopsis thaliana GN=SCL11 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.617e-23 Identity = 73/254 (28.74%), Postives = 126/254 (49.61%), Query Frame = 2 Query: 14 TNSKGNSEQRLMEHMCSALKSRVN-----PHENPPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVA---DGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTV 751 ++S G+ QRL + AL++R+ P NP P + + ++ +L P + + AAN +I E M+ T K+H++DF + G Q+ L ALS R G P +++VT + G ++++ +L + ++ V FN I K++ ++ D L P ET VN +L PDE+VS ++PRD +L+ + ++P + E N+ FM R EA +Y +LFD ++T+ Sbjct: 254 SSSNGDGTQRLAFYFAEALEARITGNISPPVSNPFPSSTTSMVDILKAYKLFVHTCPIYVTDYFAANKSIYELAMKAT--------KLHIVDFGVLYGFQWPCLLRALSKRPGGPP-MLRVTGIELPQAGFRPSDRVEETGRRLKRFCDQFNVPFEFNF-IAKKWETITLDELMINPGETTVVNCIHRLQYTPDETVSLDSPRDTVLKLFRDINPDLFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTI 497
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCL7_ARATH (Scarecrow-like protein 7 OS=Arabidopsis thaliana GN=SLC7 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.474e-22 Identity = 76/258 (29.46%), Postives = 125/258 (48.45%), Query Frame = 2 Query: 8 QATNSKGNSEQRLMEHMCSALKSRVNPHENPPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVAD---GTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 ++ + G+ QR+ + AL + E+P + ++ S + L D P + AN AILEAT + SN IH++DF I QG Q+ L AL+ R +GKP ++++ + G + L A ++L A + + F + L+ S +PDE L VNF +L+++ DE+ +T LR + L+P +VTL E E + N F RV + +Y A+F+S+E + RD +R Sbjct: 200 ESVSESGDPIQRVGYYFAEALSHKET--ESPSSSSSSSLEDFILSYKTLNDACPYSKFAHLTANQAILEATNQ--------SNNIHIVDFGIFQGIQWSALLQALATRSSGKPTRIRISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEF-YPVLTPIQLLNGSSFRVDPDEVLVVNFMLELYKLLDETATTVGTA---LRLARSLNPRIVTLGEYEVSLNRVEFANRVKNSLRFYSAVFESLEPNLDRDSKER 443
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: RGL3_ARATH (DELLA protein RGL3 OS=Arabidopsis thaliana GN=RGL3 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.474e-22 Identity = 77/207 (37.20%), Postives = 108/207 (52.17%), Query Frame = 2 Query: 155 YDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPD-ETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 YD P AN AILEA TT S +HVID + QG Q+ L AL+ R G P+ ++T V + ++ E ++ + KL+Q+A+ +GV +FN + DL D + ETL VN F+L + + S E +LL VK + P +VT+VEQE N N F+ R NEA YY +LFDS+E V+ DR Sbjct: 232 YDSCPYLKFAHFTANQAILEAV---TT-----SRVVHVIDLGLNQGMQWPALMQALALRPGGPPSF-RLTGVGN-PSNREGIQELGWKLAQLAQAIGVEFKFNGLTTERLSDLEPDMFETRTESETLVVNSVFELHPVLSQPGSIE----KLLATVKAVKPGLVTVVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDR 424
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: DWRF8_MAIZE (DELLA protein DWARF8 OS=Zea mays GN=D8 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.802e-20 Identity = 77/250 (30.80%), Postives = 120/250 (48.00%), Query Frame = 2 Query: 17 NSKGNSEQRLMEHMCSALKSRVNPHENPPPVAELFGKEHAESTQL-LYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASE-EKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDET------LAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIE 742 +S+G + +++ + AL RV PPP + L A+ Y+ P AN AILEA G ++HV+DF I QG Q+ L AL+ R G P+ ++T V E + L+ V KL+Q A + V ++ + DL L E D+T +AVN F+L R+ ++ +++L V+ + P +VT+VEQE N N+ F+ R E+ YY +FDS+E Sbjct: 274 SSQGGAMRKVAAYFGEALARRVYRFR-PPPDSSLLDAAFADLLHAHFYESCPYLKFAHFTANQAILEAFA--------GCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSF-RLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLQPEGDDTDDEPEVIAVNSVFELHRL----LAQPGALEKVLGTVRAVRPRIVTVVEQEANHNSGTFLDRFTESLHYYSTMFDSLE 509
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCR1_ORYSJ (Protein SCARECROW 1 OS=Oryza sativa subsp. japonica GN=SCR1 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.243e-20 Identity = 81/257 (31.52%), Postives = 125/257 (48.64%), Query Frame = 2 Query: 26 GNSEQRLMEHMCSALKSRV--------NPHENPPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 G S QR+ + A+ +R+ P NP P A A + Q+ SP AN AI EA + ++H+ID DI QG Q+ LFH L++R G P V++T + AS E L+A +LS A+ +G+ F + K +L + LG E +AV++ + D + S N L ++ L+P VVT+VEQ+ +++ F+AR EA YY ALFDS++++ D +R Sbjct: 317 GTSTQRVAAYFAEAMSARLVSSCLGLYAPLPNPSPAAARLHGRVAAAFQVFNGISPFVKFSHFTANQAIQEAFERE--------ERVHIIDLDIMQGLQWPGLFHILASRPGGPPR-VRLTGLG---ASMEALEATGKRLSDFADTLGLPFEF-CPVADKAGNLDPEKLGVTRREAVAVHWL--RHSLYDVTGSDSN----TLWLIQRLAPKVVTMVEQDL-SHSGSFLARFVEAIHYYSALFDSLDASYSEDSPER 553
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCR1_ORYSI (Protein SCARECROW 1 OS=Oryza sativa subsp. indica GN=SCR1 PE=3 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 5.243e-20 Identity = 81/257 (31.52%), Postives = 125/257 (48.64%), Query Frame = 2 Query: 26 GNSEQRLMEHMCSALKSRV--------NPHENPPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 G S QR+ + A+ +R+ P NP P A A + Q+ SP AN AI EA + ++H+ID DI QG Q+ LFH L++R G P V++T + AS E L+A +LS A+ +G+ F + K +L + LG E +AV++ + D + S N L ++ L+P VVT+VEQ+ +++ F+AR EA YY ALFDS++++ D +R Sbjct: 325 GTSTQRVAAYFAEAMSARLVSSCLGLYAPLPNPSPAAARLHGRVAAAFQVFNGISPFVKFSHFTANQAIQEAFERE--------ERVHIIDLDIMQGLQWPGLFHILASRPGGPPR-VRLTGLG---ASMEALEATGKRLSDFADTLGLPFEF-CPVADKAGNLDPEKLGVTRREAVAVHWL--RHSLYDVTGSDSN----TLWLIQRLAPKVVTMVEQDL-SHSGSFLARFVEAIHYYSALFDSLDASYSEDSPER 561
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: GAI_GOSHI (DELLA protein GAI OS=Gossypium hirsutum GN=GAI PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.526e-19 Identity = 65/200 (32.50%), Postives = 98/200 (49.00%), Query Frame = 2 Query: 155 YDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDE--TLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIEST 748 Y+ P AN AILEA ++++HVIDF + QG Q+ L AL+ R G PA + + L+ V KL+Q+AER+G+ F + DL + L P E +AVN F+L + ++ ++++ +K + P +VT+VEQE N N F+ R EA YY LFDS+E + Sbjct: 245 YETCPYLKFAHFTANQAILEAFSM--------ASRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLAERIGIEFEFRGFVANSLADLEPEMLDIRPPEIEVVAVNAVFELHPL----LARPGGIEKVVSSIKAMKPKIVTVVEQEANHNGPVFLDRFTEALHYYSTLFDSLEGS 432
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: RGA1_BRACM (DELLA protein RGA1 OS=Brassica campestris GN=RGA1 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.439e-19 Identity = 75/247 (30.36%), Postives = 118/247 (47.77%), Query Frame = 2 Query: 20 SKGNSEQRLMEHMCSALKSRVNPHENPPPVAELFGKEHAESTQL---LYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTA-SEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDET--LAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIE 742 S+ + +++ + AL R+ + PP ++ +H+ S L Y+ P AN AILEA G ++HVIDF + QG Q+ L AL+ R G P+ ++T + A + + L V KL+Q+AE + V + + DL L P ET +AVN F+L ++ + E ++ VK + P + T+VEQE+N N F+ R E+ YY LFDS+E Sbjct: 240 SQAGAMRKVATYFAEALARRI--YRLSPPQTQI---DHSLSDTLQMHFYETCPYLKFAHFTANQAILEAFE--------GKKRVHVIDFSMNQGLQWPALMQALALREGGPPSF-RLTGIGPPAADNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSETEAVAVNSVFELHKLLGRTGGIE----KVFGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLE 468
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: GAI1_VITVI (DELLA protein GAI1 OS=Vitis vinifera GN=GAI1 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.439e-19 Identity = 64/196 (32.65%), Postives = 92/196 (46.94%), Query Frame = 2 Query: 155 YDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIE 742 Y+ P AN AILEA G ++HVIDF + QG Q+ L AL+ R G P+ T + + L V KL+Q+AE + V + + DL L E++AVN F+L + ++ + +L VK + P +VT+VEQE N N F+ R E+ YY LFDS+E Sbjct: 288 YETCPYLKFAHFTANQAILEAFE--------GKKRVHVIDFSMKQGMQWPALMQALALRPGGPPSFRLTGIGPPSTDNTDHLHEVGWKLAQLAETIHVEFEYRGFVANSLADLDASMLELRDGESVAVNSVFELHSL----LARPGGIERVLSAVKDMKPDIVTIVEQEANHNGPVFLDRFTESLHYYSTLFDSLE 471 The following BLAST results are available for this feature:
BLAST of CN188892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188892 ID=CN188892; Name=CN188892; organism=Citrus sinensis; type=EST; length=773bpback to top |