CN188892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: GAI_ARATH (DELLA protein GAI OS=Arabidopsis thaliana GN=GAI PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.181e-17 Identity = 69/228 (30.26%), Postives = 107/228 (46.93%), Query Frame = 2 Query: 77 RVNPHENPPPVAELFGKEHAESTQL---LYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASE-EKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDE--TLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIE 742 R++P ++P +H+ S L Y+ P AN AILEA G ++HVIDF + QG Q+ L AL+ R G P + ++T + + L V KL+ +AE + V + + DL L P E ++AVN F+L ++ + D++L V + P + T+VEQE+N N+ F+ R E+ YY LFDS+E Sbjct: 223 RLSPSQSPI--------DHSLSDTLQMHFYETCPYLKFAHFTANQAILEAFQ--------GKKRVHVIDFSMSQGLQWPALMQALALRPGGPP-VFRLTGIGPPAPDNFDYLHEVGCKLAHLAEAIHVEFEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKL----LGRPGAIDKVLGVVNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLE 429
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCL30_ARATH (Scarecrow-like protein 30 OS=Arabidopsis thaliana GN=SCL30 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.255e-17 Identity = 69/255 (27.06%), Postives = 115/255 (45.10%), Query Frame = 2 Query: 26 GNSEQRLMEHMCSALKSRVNPHENPPPVAELFGKEHAESTQLLYDF---SPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVA---DGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 G++ QRL H AL++R+ P A + + F P + + AN I E + TT +H+IDF I G Q+ L ALS R G P +++VT + G E+++ +L + ++ V ++ I +++++ D L ET VN +L PDE+VS +PRD L+ + ++P + E N+ F+ R EA + +LFD E+T+ D + R Sbjct: 243 GDATQRLGYHFAEALEARITGTMTTPISATSSRTSMVDILKAYKGFVQACPTLIMCYFTANRTINELASKATT--------LHIIDFGILYGFQWPCLIQALSKRDIGPP-LLRVTGIELPQSGFRPSERVEETGRRLKRFCDKFNVPFEYSF-IAKNWENITLDDLVINSGETTVVNCILRLQYTPDETVSLNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCR 487
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: GAIP_CUCMA (DELLA protein GAIP OS=Cucurbita maxima GN=GAIP PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.062e-16 Identity = 62/198 (31.31%), Postives = 92/198 (46.46%), Query Frame = 2 Query: 155 YDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDE--TLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIE 742 Y+ P AN AILEA G ++HVIDF + QG Q+ L AL+ R +G P + + L+ V KL + AE + V + + DL L P E ++ VN F+L ++ ++ +++L VK + P +VT+VEQE N N F+ R E+ YY LFDS+E Sbjct: 285 YESCPYLKFAHFTANQAILEAFE--------GKKRVHVIDFSMNQGIQWPALIQALALRPSGPPTFRLTGIGPPAPDNSDYLQDVGWKLVKFAETLHVEFEYRGFVANSLADLDASMLELRPSEVESVVVNSVFELHQL----LARPGAIEKVLSVVKQMKPEIVTVVEQEANHNGPVFVERFTESLHYYSTLFDSLE 470
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCL14_ARATH (Scarecrow-like protein 14 OS=Arabidopsis thaliana GN=SCL14 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.593e-16 Identity = 64/253 (25.30%), Postives = 116/253 (45.85%), Query Frame = 2 Query: 26 GNSEQRLMEHMCSALKSRVNPHENPPPVAELFGKEHAESTQLLYDFSPCFSL-GFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVA---DGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 GN +RL + ++L++R+ + + + +L + S+ F A + +M + T N +N IH+IDF I G Q+ L H LS G +++T + G E ++ +L++ +R V +N AI K++ + + L E + VN F+ + DE+V +PRD +L+ ++ ++P+V N N F+ R EA +Y A+FD +S + R+ R Sbjct: 427 GNGSERLAHYFANSLEARLAG--TGTQIYTALSSKKTSAADMLKAYQTYMSVCPFKKAAIIFANHSMMRFTAN---ANTIHIIDFGISYGFQWPALIHRLSLSRPGGSPKLRITGIELPQRGFRPAEGVQETGHRLARYCQRHNVPFEYN-AIAQKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVLVNSPRDAVLKLIRKINPNVFIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMR 673
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCR_PEA (Protein SCARECROW OS=Pisum sativum GN=SCR PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.745e-15 Identity = 74/262 (28.24%), Postives = 120/262 (45.80%), Query Frame = 2 Query: 8 QATNSKGNSEQRLMEHMCSALKSRVNPH------ENPPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNF-AFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 Q + G S QR+ + A+ +R+ P ++ A + Q+ SP AN AI EA + ++H+ID DI QG Q+ LFH L++R G P V++T + S E L+A +LS A ++G+ F + K ++ + L E +AV++ L+ + +T L ++ L+P VVT+VEQ+ +N F+ R EA YY ALFDS+ S+ + +R Sbjct: 475 QLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPVSSHTPHNQKVASAFQVFNGISPFVKFSHFTANQAIQEAFERE--------ERVHIIDLDIMQGLQWPGLFHILASRPGG-PPYVRLTGLG---TSMETLEATGKRLSDFANKLGLPFEF-FPVAEKVGNIDVEKLNVSKSEAVAVHWLQHSLYDVTGSDTNT-------LWLLQRLAPKVVTVVEQDL-SNAGSFLGRFVEAIHYYSALFDSLGSSYGEESEER 715
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCR_IPONI (Protein SCARECROW OS=Ipomoea nil GN=SCR PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.888e-15 Identity = 73/259 (28.19%), Postives = 123/259 (47.49%), Query Frame = 2 Query: 26 GNSEQRLMEHMCSALKSRV---------NPHENPPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNF-AFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 G S QR+ + A+ +R+ + N P++ ++ A + Q+ SP AN AI EA + +++H+ID DI QG Q+ LFH L++R G P +V++T + S E L+A +LS A+++G+ F + K +L L E +AV++ L+ + +T L ++ L+P VVT+VEQ+ ++ F+ R EA YY ALFDS+ + + +R Sbjct: 451 GTSAQRVAAYFSEAMSARLVNSCLGIYASAPLNALPLS--LNQKMASAFQVFNGISPFVKFSHFTANQAIQEAFERE--------DRVHIIDLDIMQGLQWPGLFHILASRPGG-PPLVRLTGLG---TSMEALEATGKRLSDFAQKLGLPFEF-FPVADKVGNLDPQRLNVNKREAVAVHWLQHSLYDVTGSDTNT-------LWLLQRLAPKVVTVVEQDL-SHAGSFLGRFVEAIHYYSALFDSLGACYGEESEER 686
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCL34_ARATH (Scarecrow-like protein 34 OS=Arabidopsis thaliana GN=SCL34 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.633e-15 Identity = 67/269 (24.91%), Postives = 124/269 (46.10%), Query Frame = 2 Query: 8 QATNSKGNSEQRLMEHMCSALKSRVNPHENPPPVAELFG------KEHAESTQLLY----DFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVA---DGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTEN-PRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 Q ++ G++ QRL +AL++R+ P + + K+ A T Y SP +L + + IL+ + +H++DF I G Q+ ++S R + P +++T + G E+++ +L++ +R V + ++ + + L P+E LAVN +L + DE+ S EN PRD +L+ ++ ++P V + N F++R EA +Y ALFD +ST+ RD+ +R Sbjct: 277 QQSSPLGDAGQRLAHCFANALEARLQGSTGPM-IQTYYNALTSSLKDTAADTIRAYRVYLSSSPFVTLMYFFSIWMILDVAKDAPV--------LHIVDFGILYGFQWPMFIQSISDRKD-VPRKLRITGIELPQCGFRPAERIEETGRRLAEYCKRFNVPFEYKAIASQNWETIRIEDLDIRPNEVLAVNAGLRLKNLQDETGSEENCPRDAVLKLIRNMNPDVFIHAIVNGSFNAPFFISRFKEAVYHYSALFDMFDSTLPRDNKER 535
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCR_ARATH (Protein SCARECROW OS=Arabidopsis thaliana GN=SCR PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.520e-14 Identity = 74/266 (27.82%), Postives = 121/266 (45.49%), Query Frame = 2 Query: 8 QATNSKGNSEQRLMEHMCSALKSRVN----------PHENPPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNF-AFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 Q + G S QR+ + A+ +R+ P P L + + Q+ SP AN AI EA ++ + +H+ID DI QG Q+ LFH L++R G P V++T + S E L+A +LS A+++G+ F + K +L + L E +AV++ L+ + T L ++ L+P VVT+VEQ+ ++ F+ R EA YY ALFDS+ ++ + +R Sbjct: 318 QLSTPYGTSAQRVAAYFSEAMSARLLNSCLGIYAALPSRWMPQTHSL---KMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKE--------DSVHIIDLDIMQGLQWPGLFHILASRPGGPPH-VRLTGLG---TSMEALQATGKRLSDFADKLGLPFEF-CPLAEKVGNLDTERLNVRKREAVAVHWLQHSLYDVTGSDAHT-------LWLLQRLAPKVVTVVEQDL-SHAGSFLGRFVEAIHYYSALFDSLGASYGEESEER 559
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCL18_ARATH (Scarecrow-like protein 18 OS=Arabidopsis thaliana GN=SCL18 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.520e-14 Identity = 60/219 (27.40%), Postives = 103/219 (47.03%), Query Frame = 2 Query: 152 LYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGK---PAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFD------DLSRDSLGCEPDETLAVN---FAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 L +P G + AN AIL+AT G +H++D DI QG Q+ L AL+ R + P +++T L D+L++ A+ +G+ +F+ + ++ D + +L ET+AVN F K+F + + L +K L+ +VT+ E+E N F+ R +EA +Y A+FDS+E+T+ + +R Sbjct: 149 LNQLTPFIRFGHLTANQAILDATETNDNG------ALHILDLDISQGLQWPPLMQALAERSSNPSSPPPSLRITGCGRDVTG---LNRTGDRLTRFADSLGLQFQFHTLVIVEEDLAGLLLQIRLLALSAVQGETIAVNCVHFLHKIFNDDGDMIG------HFLSAIKSLNSRIVTMAEREANHGDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRER 352
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCL9_ARATH (Scarecrow-like protein 9 OS=Arabidopsis thaliana GN=SCL9 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.333e-14 Identity = 53/196 (27.04%), Postives = 90/196 (45.92%), Query Frame = 2 Query: 185 FMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 F + I T+ GN S ++HVIDF I G Q+ L H S + K I + G ++++ +L+ A+ GV + AI K+D + + L + DE VN ++ + DESV E+ RD +L + ++P + N F+ R EA ++ ++FD +E+ V R+ +R Sbjct: 430 FRKLSYFITNKTIRDLVGN---SQRVHVIDFGILYGFQWPTLIHRFSMYGSPKVRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYK-AIAKKWDAIQLEDLDIDRDEITVVNCLYRAENLHDESVKVESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPREDEER 621 The following BLAST results are available for this feature:
BLAST of CN188892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188892 ID=CN188892; Name=CN188892; organism=Citrus sinensis; type=EST; length=773bpback to top |