CN188892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: NSP2_MEDTR (Nodulation-signaling pathway 2 protein OS=Medicago truncatula GN=NSP2 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.134e-13 Identity = 62/227 (27.31%), Postives = 101/227 (44.49%), Query Frame = 2 Query: 86 PHENPPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRD---KLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKL----FRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIES 745 PH+N F QLL D SP G AN AI+EA + ++HVID+DI +G Q+ +L +L++ NG +++TA++ + V++ +L+ A +G F+ + +L E L N L +R P+ S L K L+P +VTLVE+E + F+ R ++ +Y A+FDS+E+ Sbjct: 198 PHDNQNDTLAAF--------QLLQDMSPYVKFGHFTANQAIIEAVAHE--------RRVHVIDYDIMEGVQWASLIQSLASNNNGPH--LRITALSRTGTGRRSIATVQETGRRLTSFAASLGQPFSFHHCRLDSDETFRPSALKLVRGEALVFNCMLNLPHLSYRAPESVAS-------FLNGAKTLNPKLVTLVEEEVGSVIGGFVERFMDSLHHYSAVFDSLEA 399
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCL33_ARATH (Scarecrow-like protein 33 OS=Arabidopsis thaliana GN=SCL33 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.639e-13 Identity = 61/259 (23.55%), Postives = 120/259 (46.33%), Query Frame = 2 Query: 8 QATNSKGNSEQRLMEHMCSALKSRVNPHENPPPVAELFGKEHAESTQL-----LYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVA---DGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRD 760 Q ++S G+ +RL + ++L++R+ A L K+ + S L P + + AN +I+ ++ + IH+IDF I G Q+ +L H L+ R G +++T + G E + +L++ ++ + +N AI K++ + + L + E +AVN F+ + DE+V+ +PRD +L+ ++ + P V + N F+ R E +Y +LFD ++ + R+ Sbjct: 346 QHSSSYGDGTERLAHYFANSLEARLAGIGTQVYTA-LSSKKTSTSDMLKAYQTYISVCPFKKIAIIFANHSIMRLA------SSANAKTIHIIDFGISDGFQWPSLIHRLAWR-RGSSCKLRITGIELPQRGFRPAEGVIETGRRLAKYCQKFNIPFEYN-AIAQKWESIKLEDLKLKEGEFVAVNSLFRFRNLLDETVAVHSPRDTVLKLIRKIKPDVFIPGILSGSYNAPFFVTRFREVLFHYSSLFDMCDTNLTRE 595
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SHR_ARATH (Protein SHORT-ROOT OS=Arabidopsis thaliana GN=SHR PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.059e-12 Identity = 69/279 (24.73%), Postives = 121/279 (43.37%), Query Frame = 2 Query: 5 DQATNSKGNSEQRLMEHMCSALKSRVNPHEN--------PPPVAELFGKEHAESTQLLY-DFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVA------DGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICL-KFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNT-------NTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 ++ ++ G++EQ+L + AL +R+ + E T L + + SP + G +AAN AILEA G KIH++D Q+ L AL+ R + P + T V D TAS +K + +++ + A +GV +FN+ + + + L +PDE LA+N + + S +PRD ++ + L P +VT+VE+E + F+ E ++ F+S E + R ++R Sbjct: 170 NELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVD--------GEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGI----ASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNER 436
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCL31_ARATH (Scarecrow-like protein 31 OS=Arabidopsis thaliana GN=SCL31 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.059e-12 Identity = 60/260 (23.08%), Postives = 112/260 (43.08%), Query Frame = 2 Query: 26 GNSEQRLMEHMCSALKSRVNPHENP--PPVAELFGKEHAESTQLLYDFS------PCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNG--KPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTEN-PRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 G++ QRL +AL++R+ + + + Q+L +S P +L + +N IL+A + + +H++DF I G Q+ LS G K I + G E+++ +L++ +R GV +N ++ + + P+E LAVN + + D E+ PRD L+ ++ ++P+V + N F R EA +Y ALFD +T+ +++ +R Sbjct: 316 GDASQRLAHFFANALEARLEGSTGTMIQSYYDSISSKKRTAAQILKSYSVFLSASPFMTLIYFFSNKMILDAAKDASV--------LHIVDFGILYGFQWPMFIQHLSKSNPGLRKLRITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGVPFEYNAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRDMNPNVFLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENPER 567
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCL26_ARATH (Scarecrow-like protein 26 OS=Arabidopsis thaliana GN=SCL26 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.059e-12 Identity = 59/206 (28.64%), Postives = 103/206 (50.00%), Query Frame = 2 Query: 146 QLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPA-IVKVTAVADGTASEEKLKAVRD---KLSQVAERVGVCLRFNVAIC-LKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETN-TNTAPFMARVNEACAYYGALFDSIES 745 +LL + SP + G++ A AILEA + +IH++D+DI +G Q+ +L AL +R G A +++TA++ T ++ + AV++ +L+ A+ +G F+ C L + S SL E + +N + +P S T + L K L+P +VTLV +E F+ R + + A+FDS+E+ Sbjct: 185 ELLQNMSPYVNFGYLTATQAILEAVKYE--------RRIHIVDYDINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGRRLTAFADSIG--QPFSYQHCKLDTNAFSTSSLKLVRGEAVVINC---MLHLPRFSHQTPSSVISFLSEAKTLNPKLVTLVHEEVGLMGNQGFLYRFMDLLHQFSAIFDSLEA 377
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCL28_ARATH (Scarecrow-like protein 28 OS=Arabidopsis thaliana GN=SCL28 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.024e-12 Identity = 47/171 (27.49%), Postives = 88/171 (51.46%), Query Frame = 2 Query: 248 GSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRD 760 G ++H+IDFDI QG Q+ + F +L++R+N P V++T + + S+ +L D+L AE + + F+ + + +D+ L + E++AVN ++ + + T + L ++ +P + L EQE N+ RV + YY A+FD+I + + D Sbjct: 382 GKERVHIIDFDIKQGLQWPSFFQSLASRIN-PPHHVRITGIGE---SKLELNETGDRLHGFAEAMNLQFEFHPVVD-RLEDVRLWMLHVKEGESVAVNCVMQMHKTLYD--GTGAAIRDFLGLIRSTNPIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATD 545
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCL32_ARATH (Scarecrow-like protein 32 OS=Arabidopsis thaliana GN=SCL32 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.964e-12 Identity = 68/262 (25.95%), Postives = 114/262 (43.51%), Query Frame = 2 Query: 26 GNSEQRLMEHMCSALKSRVNPHENPP--------PVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADG-------TASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSR--DSLGCEP---DETLAVNFAFKLFRMPDESV--STENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIES 745 G+S QRL AL SR + P P A+ + D +P GF+AAN AIL A G + +H++D + Q L A+++RLN P ++K+T V+ S E+L + KL A + + F + D S L P +E L VN L +P+E + S+ + R L++++ L+P +VTL+E++ + + + R+ A Y+ FD+ ++ Sbjct: 61 GDSTQRLTSAFLRALLSRA-VSKTPTLSSTISFLPQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVE--------GYSTVHIVDLSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGS---KLVNFATTRNITMEFTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSSSLRTVFLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTDT 310
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCL27_ARATH (Scarecrow-like protein 27 OS=Arabidopsis thaliana GN=SCL27 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.997e-11 Identity = 68/255 (26.67%), Postives = 117/255 (45.88%), Query Frame = 2 Query: 38 QRLMEHMCSALKSRVNPHENPPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNG----KPAIVKVTAVA--DGTASEE-KLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRD-----SLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHS 766 QR H+ AL S ++ +PP + + + + SP AN +ILE+ E G ++IH+IDFD+G GGQ+ +L L++ + G + + +K+T A T S+E +L+ + L A V + + L + L SL E +AVN +P SV++ +LR +K LSP++V ++ + N APF V + Y+ +L +S+++ +D S Sbjct: 315 QRAASHIAEALLSLIHNESSPPLITPENLILRIAAYRSFSETSPFLQFVNFTANQSILESCNES------GFDRIHIIDFDVGYGGQWSSLMQELASGVGGRRRNRASSLKLTVFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFEIEL---LSVELLLNPAYWPLSLRSSEKEAIAVN-------LPVNSVAS-GYLPLILRFLKQLSPNIVVCSDRGCDRNDAPFPNAVIHSLQYHTSLLESLDANQNQDDS 552
BLAST of CN188892 vs. ExPASy Swiss-Prot
Match: SCL23_ARATH (Scarecrow-like protein 23 OS=Arabidopsis thaliana GN=SCL23 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.449e-11 Identity = 62/259 (23.94%), Postives = 119/259 (45.95%), Query Frame = 2 Query: 26 GNSEQRLMEHMCSALKSRVNPHE--------NPPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNF-AFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETN-TNTAPFMARVNEACAYYGALFDSIESTVLRDHSDR 772 G+S +R++ + AL++RV + P+ + ++ + Q SP AN AI +A G + +H+ID D+ QG Q+ LFH L++R P ++ + +S + L + +L+ A + + F+ + + + L E + V++ +L+ + ++ T E+LRR+K P+++T+VEQE + + F+ R EA YY ALFD++ + + +R Sbjct: 74 GSSPERVVAYFAQALQTRVISSYLSGACSPLSEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALD--------GEDSVHIIDLDVMQGLQWPALFHILASR----PRKLRSIRITGFGSSSDLLASTGRRLADFASSLNLPFEFHPIEGIIGNLIDPSQLATRQGEAVVVHWMQHRLYDVTGNNLETL----EILRRLK---PNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGER 313 The following BLAST results are available for this feature:
BLAST of CN188892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188892 ID=CN188892; Name=CN188892; organism=Citrus sinensis; type=EST; length=773bpback to top |