CN182113
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182113 vs. ExPASy Swiss-Prot
Match: ATPB_SILST (ATP synthase subunit beta OS=Silicibacter sp. (strain TM1040) GN=atpD PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.705e-31 Identity = 68/113 (60.18%), Postives = 85/113 (75.22%), Query Frame = 2 Query: 290 AIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAP 628 A G+V Q+IGAVVDV+FD LP IL AL ++ +LVLEVAQH+GE VRTIAMD TEGLVRGQ V +TG+PI++PVG TLGRI+NV+GEP+DE + + IH+ AP Sbjct: 4 AKGKVTQIIGAVVDVQFDGELPAILNALTTDNNGKKLVLEVAQHLGENSVRTIAMDATEGLVRGQEVTDTGAPISIPVGNATLGRILNVVGEPVDEGEPIVAKETRAIHQPAP 116
BLAST of CN182113 vs. ExPASy Swiss-Prot
Match: ATPB_GEOSM (ATP synthase subunit beta OS=Geobacter sp. (strain M21) GN=atpD PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.533e-31 Identity = 72/118 (61.02%), Postives = 85/118 (72.03%), Query Frame = 2 Query: 296 GQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPA 631 G++ QVIGAV+DV F+ G LPPI AL V D LVLEVAQH+GE VRTIAMD T+GLVRGQ+V + G I+VPVG+ TLGRI+NVIGEP+DE G + E IHREAPA Sbjct: 6 GKISQVIGAVIDVEFEPGKLPPIYQALRVTNPAIDDQEFNLVLEVAQHLGENAVRTIAMDSTDGLVRGQQVKDMGKQISVPVGKKTLGRILNVIGEPVDEMGPIGNEKEYGIHREAPA 123
BLAST of CN182113 vs. ExPASy Swiss-Prot
Match: ATPB_RICFE (ATP synthase subunit beta OS=Rickettsia felis GN=atpD PE=3 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 7.870e-31 Identity = 68/114 (59.65%), Postives = 85/114 (74.56%), Query Frame = 2 Query: 293 IGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAP 628 IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD TEGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP Sbjct: 5 IGKITQIISAVVDVKFTNNGELPEILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSTEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKSAP 118
BLAST of CN182113 vs. ExPASy Swiss-Prot
Match: ATPB_RICAH (ATP synthase subunit beta OS=Rickettsia akari (strain Hartford) GN=atpD PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.870e-31 Identity = 68/114 (59.65%), Postives = 85/114 (74.56%), Query Frame = 2 Query: 293 IGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAP 628 IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD TEGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP Sbjct: 5 IGKITQIISAVVDVKFTNNGELPEILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSTEGLVRGVEVMDTGSPICIPVGTETLGRIMNVVGEPIDGKGDIKSSNISAIYKSAP 118
BLAST of CN182113 vs. ExPASy Swiss-Prot
Match: ATPB_CARHZ (ATP synthase subunit beta OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=atpD PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.870e-31 Identity = 66/121 (54.55%), Postives = 88/121 (72.73%), Query Frame = 2 Query: 293 IGQVCQVIGAVVDVRFDEG-LPPILTALEV--------VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAP 628 +G+V QVIG VVDV F+ G +PPI AL++ + + L LEVAQH+G VR +AM T+GLVRG +V++TG+PITVPVGR LGR++NV+GEPID KG ++++HY PIHR AP Sbjct: 3 VGRVVQVIGVVVDVEFEPGKVPPIYNALKIRSEDQDTPTEVPINLTLEVAQHLGNNRVRAVAMSSTDGLVRGMKVVDTGAPITVPVGRPVLGRLLNVLGEPIDGKGPVESDHYYPIHRPAP 123
BLAST of CN182113 vs. ExPASy Swiss-Prot
Match: ATPB_RICM5 (ATP synthase subunit beta OS=Rickettsia massiliae (strain Mtu5) GN=atpD PE=3 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.028e-30 Identity = 68/114 (59.65%), Postives = 85/114 (74.56%), Query Frame = 2 Query: 293 IGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAP 628 IG++ Q+I AVVDV+F LP IL ALE + R+VLEVAQH+G+ VR IAMD TEGLVRG V++TGSPI +PVG TLGRIMNV+GEPID KGD+K+ + I++ AP Sbjct: 5 IGKITQIISAVVDVKFTNNGELPEILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSTEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAP 118
BLAST of CN182113 vs. ExPASy Swiss-Prot
Match: ATPB_GEOBB (ATP synthase subunit beta OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=atpD PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.028e-30 Identity = 71/117 (60.68%), Postives = 84/117 (71.79%), Query Frame = 2 Query: 296 GQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAP 628 G++ QVIGAV+DV F+ G LPPI AL V D LVLEVAQH+GE VRTIAMD T+GLVRGQ+V + G I+VPVG+ TLGRI+NVIGEP+DE G + E IHREAP Sbjct: 6 GKISQVIGAVIDVEFEPGKLPPIYQALRVTNPAIDDQEFNLVLEVAQHLGENAVRTIAMDSTDGLVRGQQVKDMGKQISVPVGKKTLGRILNVIGEPVDEMGPIGNEKEYGIHREAP 122
BLAST of CN182113 vs. ExPASy Swiss-Prot
Match: ATPB_DESDG (ATP synthase subunit beta OS=Desulfovibrio desulfuricans (strain G20) GN=atpD PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.753e-30 Identity = 70/117 (59.83%), Postives = 85/117 (72.65%), Query Frame = 2 Query: 293 IGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS----VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAP 628 IG++ QVIGAVVDV F +G LP IL AL + + + L+ EVAQH+G+ VVRTIAMD TEGLVRG V +TG+PI VPVG +LGRIMNV+G P+DE GD+ LPIHR AP Sbjct: 4 IGKITQVIGAVVDVEFADGNLPNILNALVIKNPNNADCPELICEVAQHLGDNVVRTIAMDATEGLVRGMEVTDTGNPIMVPVGSASLGRIMNVVGRPVDEMGDIDAAKSLPIHRPAP 120
BLAST of CN182113 vs. ExPASy Swiss-Prot
Match: ATPB_GEOLS (ATP synthase subunit beta OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=atpD PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.290e-30 Identity = 72/119 (60.50%), Postives = 85/119 (71.43%), Query Frame = 2 Query: 293 IGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPA 631 IG++ QVIGAV+DV F+ G LP I AL V + ++ LVLEVAQH+GE VRTIAMD T+GL RGQ V++TG I PVGR TLGRIMNVIGEP+DE G + E IHREAPA Sbjct: 5 IGKISQVIGAVIDVEFEPGKLPEIYHALRVTNPAIDDRENNLVLEVAQHLGENSVRTIAMDSTDGLKRGQAVIDTGKQICAPVGRKTLGRIMNVIGEPVDEMGPIGNEKEYGIHREAPA 123
BLAST of CN182113 vs. ExPASy Swiss-Prot
Match: ATPB_ALKOO (ATP synthase subunit beta OS=Alkaliphilus oremlandii (strain OhILAs) GN=atpD PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.991e-30 Identity = 63/117 (53.85%), Postives = 85/117 (72.65%), Query Frame = 2 Query: 284 KGAIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPA 631 +G +G++ Q+IG V+D+RF E LP +L A+E+ ++V+EV+QH+G+ VR +AM T+GLVRG +TG PITVPVGR TLGRI NVIGEP+DEKG + E PIHR AP+ Sbjct: 3 EGNVGKLVQIIGPVIDIRFSRENLPNLLNAIEIEGPDGKIVVEVSQHIGDDTVRCVAMKSTDGLVRGMEAKDTGGPITVPVGRATLGRIFNVIGEPVDEKGAVAAEAKAPIHRPAPS 119 The following BLAST results are available for this feature:
BLAST of CN182113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182113 ID=CN182113; Name=CN182113; organism=Citrus sinensis; type=EST; length=631bpback to top |