CN188889

Overview
NameCN188889
Unique NameCN188889
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length655
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1010..1664. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188889 vs. ExPASy Swiss-Prot
Match: ALDOA_MOUSE (Fructose-bisphosphate aldolase A OS=Mus musculus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 234.187 bits (596), Expect = 4.628e-61
Identity = 124/194 (63.92%), Postives = 141/194 (72.68%), Query Frame = 2
Query:   77 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTER 655
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+ +C  VTE+
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEK 208          
BLAST of CN188889 vs. ExPASy Swiss-Prot
Match: ALDOA_HUMAN (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 234.187 bits (596), Expect = 4.628e-61
Identity = 124/194 (63.92%), Postives = 141/194 (72.68%), Query Frame = 2
Query:   77 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTER 655
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+ +C  VTE+
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEK 208          
BLAST of CN188889 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 7.894e-61
Identity = 121/198 (61.11%), Postives = 144/198 (72.73%), Query Frame = 2
Query:   62 GKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTER 655
            G YADEL+K A  I +PG+GILA DES  T GKRL+SI +EN E NR+A R LL   P   +Y+SG ILFEETLYQ T  G+  VDVL E  ++PGIKVDKG V LAG+N E+  QGLDGLA R   YY+ GARFAKWR V+ I PN PS LA+ E A GLARYA I Q+NGLVPIVEPEIL+DG H I++  +V ++
Sbjct:    7 GSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPTLGEYISGAILFEETLYQSTTDGRKIVDVLIEQNIIPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQK 203          
BLAST of CN188889 vs. ExPASy Swiss-Prot
Match: ALDOA_PANTR (Fructose-bisphosphate aldolase A OS=Pan troglodytes GN=ALDOA PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.297e-60
Identity = 123/194 (63.40%), Postives = 140/194 (72.16%), Query Frame = 2
Query:   77 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQ-YLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTER 655
            EL   A  I  PGKGILAADESTG+I KRL SI  EN E NRR  R+LL      +   + GVILF ETLYQK   G+PF  V+K  G + GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR VLKIG + PS LAI ENAN LARYA ICQ+NG+VPI EPEIL DG HD+ +C  VTE+
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIVGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYASICQQNGIVPIAEPEILPDGDHDLKRCQYVTEK 208          
BLAST of CN188889 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 3.000e-60
Identity = 120/196 (61.22%), Postives = 142/196 (72.45%), Query Frame = 2
Query:   68 YADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTER 655
            YADEL+K A  I +PG GI+A DES  T GKRL+SI +EN E+NR+A R LL   PG  QY+SG ILFEETLYQ T  GK  VDVL E  ++PGIKVDKG V L G+  E+  QGLDGLA R   YY+ GARFAKWR V+ I PN PS LA+ E A GLARYA I Q++GLVPIVEPEI++DG H I++  DV E+
Sbjct:   52 YADELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTEANRQAYRTLLVSAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAISQDSGLVPIVEPEIMLDGEHGIDRTYDVAEK 246          
BLAST of CN188889 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.000e-60
Identity = 120/194 (61.86%), Postives = 143/194 (73.71%), Query Frame = 2
Query:   77 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTER 655
            EL   A  I  PGKGILAADESTG++ KRL+ I VEN E NRR  R+LLF     + + + GVI F ETLYQ T  G  F  ++K+ G++ GIKVDKG V LAGTNGETTTQGLDGL++RC +Y + GA FAKWR+VLKI    PS+LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+ +C  VTE+
Sbjct:   15 ELQDIAQRIVAPGKGILAADESTGSMAKRLNPIGVENTEENRRLYRQLLFSADERIDKCIGGVIFFHETLYQNTDDGTNFAQLIKDRGIVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRSVLKISDTTPSELAIMENANVLARYASICQQNGIVPIVEPEILPDGEHDLKRCQYVTEK 208          
BLAST of CN188889 vs. ExPASy Swiss-Prot
Match: ALDOC_MOUSE (Fructose-bisphosphate aldolase C OS=Mus musculus GN=Aldoc PE=1 SV=4)

HSP 1 Score: 230.335 bits (586), Expect = 6.683e-60
Identity = 121/194 (62.37%), Postives = 141/194 (72.68%), Query Frame = 2
Query:   77 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQY-LSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTER 655
            EL   A  I TPGKGILAADES G++ KRLS I VEN E NRR  R++LF     ++  + GVI F ETLYQK   G PFV  +++ G+L GIKVDKG V LAGT+GETTTQGLDGL +RC +Y + GA FAKWR VLKI    PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+ +C  VTE+
Sbjct:   15 ELSDIALRIVTPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFVRTIQDKGILVGIKVDKGVVPLAGTDGETTTQGLDGLLERCAQYKKDGADFAKWRCVLKISDRTPSALAILENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEK 208          
BLAST of CN188889 vs. ExPASy Swiss-Prot
Match: ALDOB_DANRE (Fructose-bisphosphate aldolase B OS=Danio rerio GN=aldob PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 6.683e-60
Identity = 120/194 (61.86%), Postives = 142/194 (73.20%), Query Frame = 2
Query:   77 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTER 655
            EL   A  I  PGKGILAADESTGT+ KR   INVEN E NRR+ R+LLF    ++ + + GVILF ETLYQK+  G  F  V+K+ G++ GIKVDKGT  LAGT+GETTTQGLDGL++RC +Y + G  FAKWR VLKI  + PS L I ENAN LARYA ICQ+NGLVPIVEPEIL DG HD+ +C   TE+
Sbjct:   15 ELATIAERIVAPGKGILAADESTGTMAKRFQKINVENTEENRRSFRDLLFSVDDSISESIGGVILFHETLYQKSDKGVLFPKVIKDKGIVVGIKVDKGTAGLAGTDGETTTQGLDGLSERCAQYKKDGCDFAKWRCVLKISDSCPSALGIAENANVLARYASICQQNGLVPIVEPEILPDGDHDLKQCQYATEK 208          
BLAST of CN188889 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 229.565 bits (584), Expect = 1.140e-59
Identity = 120/212 (56.60%), Postives = 150/212 (70.75%), Query Frame = 2
Query:   20 KFSIFKSITMSCFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTER 655
            +F+   S +++     YADEL+K A  + +PG+GILA DES  T GKRL+SI +EN E+NR+A R LL   PG  QY+SG ILFEETLYQ T  GK  VDVL E G++PGIKVDKG + L G+N E+  QGLDGLA R   YY+ GARFAKWR V+ I PN PS LA+ E A GLARYA I Q+NGL PI+EPEI++DG H I++   V ++
Sbjct:   33 RFTPSGSSSLTVRASSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLISAPGLGQYVSGAILFEETLYQSTTDGKKMVDVLIEQGIVPGIKVDKGWLPLPGSNDESWCQGLDGLACRSAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAITQDNGLDPILEPEIMLDGEHGIDRTFRVAQQ 243          
BLAST of CN188889 vs. ExPASy Swiss-Prot
Match: ALDOC_RAT (Fructose-bisphosphate aldolase C OS=Rattus norvegicus GN=Aldoc PE=1 SV=3)

HSP 1 Score: 229.565 bits (584), Expect = 1.140e-59
Identity = 121/194 (62.37%), Postives = 140/194 (72.16%), Query Frame = 2
Query:   77 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQY-LSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTER 655
            EL   A  I  PGKGILAADES G++ KRLS I VEN E NRR  R++LF     ++  + GVI F ETLYQK   G PFV  ++E G+L GIKVDKG V LAGT+GETTTQGLDGL +RC +Y + GA FAKWR VLKI    PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+ +C  VTE+
Sbjct:   15 ELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFVRTIQEKGILVGIKVDKGVVPLAGTDGETTTQGLDGLLERCAQYKKDGADFAKWRCVLKISDRTPSALAILENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQFVTEK 208          
The following BLAST results are available for this feature:
BLAST of CN188889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALDOA_MOUSE4.628e-6163.92Fructose-bisphosphate aldolase A OS=Mus musculus G... [more]
ALDOA_HUMAN4.628e-6163.92Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]
ALFC1_PEA7.894e-6161.11Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALDOA_PANTR2.297e-6063.40Fructose-bisphosphate aldolase A OS=Pan troglodyte... [more]
ALFC1_ARATH3.000e-6061.22Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALDCB_DANRE3.000e-6061.86Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALDOC_MOUSE6.683e-6062.37Fructose-bisphosphate aldolase C OS=Mus musculus G... [more]
ALDOB_DANRE6.683e-6061.86Fructose-bisphosphate aldolase B OS=Danio rerio GN... [more]
ALFC_SPIOL1.140e-5956.60Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALDOC_RAT1.140e-5962.37Fructose-bisphosphate aldolase C OS=Rattus norvegi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006P14_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006P14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188889 ID=CN188889; Name=CN188889; organism=Citrus sinensis; type=EST; length=655bp
CGTCTCCCTCTAACAAAACAAATTTTCTATCTTCAAGTCGATCACCATGT
CTTGCTTCAAGGGCAAATACGCCGATGAGCTCATTAAAAATGCTGCCTAC
ATTGGCACCCCTGGAAAGGGTATCCTTGCTGCTGATGAGTCAACAGGCAC
CATTGGCAAGCGTCTATCCAGCATCAATGTTGAGAATGTTGAGTCAAACA
GGCGTGCTCTCCGCGAGCTCCTTTTCTGCACTCCCGGTGCCCTTCAGTAC
CTCAGTGGTGTCATCCTCTTCGAGGAGACCCTCTACCAGAAGACTGCTGC
TGGCAAGCCCTTTGTTGATGTCTTGAAGGAGGGGGGAGTCCTCCCTGGAA
TTAAGGTTGACAAGGGTACTGTTGAGCTTGCTGGTACCAATGGTGAGACC
ACCACCCAGGGTCTTGATGGCCTCGCCCAGCGCTGCCAGAAATACTATGA
AGCTGGTGCTCGTTTTGCCAAATGGCGTGCTGTTCTTAAGATTGGCCCTA
ATGAGCCTTCGCAGCTGGCCATCAATGAGAATGCCAATGGCCTGGCCCGA
TATGCTATCATCTGCCAGGAGAATGGCCTTGTTCCCATTGTTGAACCTGA
GATCCTTGTTGACGGTCCCCATGACATCAACAAGTGTGCTGATGTGACCG
AGCGT
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