CN188888

Overview
NameCN188888
Unique NameCN188888
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1723..2429. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188888 vs. ExPASy Swiss-Prot
Match: ALF_DICDI (Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.482e-34
Identity = 78/136 (57.35%), Postives = 95/136 (69.85%), Query Frame = -3
Query:  298 LKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMV  G++ P K T E I + TVR LQRT+P A+  VVFLSGGQ+E EAT NLNAMN L  + PW+LSFS+GRALQ S +  W G+  NV+ A+  +L R K NS A LG Y G+   G  A+ESL+VKDYKY
Sbjct:  224 LKPNMVVNGTDCPIKATSEQIGKFTVRTLQRTVPPALTGVVFLSGGQTEIEATANLNAMNVLPNR-PWALSFSYGRALQASVISTWKGESANVEAARKVYLHRAKCNSLAQLGKYTGEESTG-SASESLYVKDYKY 357          
BLAST of CN188888 vs. ExPASy Swiss-Prot
Match: ALDOC_MACFA (Fructose-bisphosphate aldolase C OS=Macaca fascicularis GN=ALDOC PE=2 SV=3)

HSP 1 Score: 143.665 bits (361), Expect = 9.351e-34
Identity = 73/136 (53.68%), Postives = 93/136 (68.38%), Query Frame = -3
Query:  298 LKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPG   P K TPE IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  229 LKPNMVTPGHACPIKYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN188888 vs. ExPASy Swiss-Prot
Match: ALDOC_HUMAN (Fructose-bisphosphate aldolase C OS=Homo sapiens GN=ALDOC PE=1 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.221e-33
Identity = 73/136 (53.68%), Postives = 93/136 (68.38%), Query Frame = -3
Query:  298 LKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPG   P K TPE IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  229 LKPNMVTPGHACPIKYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN188888 vs. ExPASy Swiss-Prot
Match: ALDOA_RAT (Fructose-bisphosphate aldolase A OS=Rattus norvegicus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.221e-33
Identity = 76/136 (55.88%), Postives = 94/136 (69.12%), Query Frame = -3
Query:  298 LKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPG     K + E IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL + ++ Y
Sbjct:  229 LKPNMVTPGHACTQKFSNEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
BLAST of CN188888 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.595e-33
Identity = 76/136 (55.88%), Postives = 94/136 (69.12%), Query Frame = -3
Query:  298 LKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKP+MVTPG+EA  + TPE +A +T++ L+  +P AVP ++FLSGGQSE EAT NLNAMNQ     PW +SFS+ RALQ + LK W GKEENV+ AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  267 LKPSMVTPGAEATDRATPEQVASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQ--APNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 399          
BLAST of CN188888 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.595e-33
Identity = 76/137 (55.47%), Postives = 94/137 (68.61%), Query Frame = -3
Query:  298 LKPNMVTPGSE--APKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVT G      K +   I   TV ALQR +P+AVP VVFLSGGQSEE+AT NLNA+NQ+  KKPW+L+FS+GRALQ S L  WAGK+EN+  AQ   L R + NS A++G Y GDA     A++SL V ++ Y
Sbjct:  230 LKPNMVTSGQSFTGEKPSNADIGLATVTALQRGVPSAVPGVVFLSGGQSEEDATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366          
BLAST of CN188888 vs. ExPASy Swiss-Prot
Match: ALF_DROME (Fructose-bisphosphate aldolase OS=Drosophila melanogaster GN=Ald PE=1 SV=5)

HSP 1 Score: 141.739 bits (356), Expect = 3.553e-33
Identity = 78/136 (57.35%), Postives = 94/136 (69.12%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTY-KGDAQLGEGAAESLHVKDYKY 702
            LKPNMVT G  A K TPE IA  TV+AL+RT+PAAV  V FLSGGQSEEEAT NL+A+N +   +PW+L+FS+GRALQ S L+AWAGK+EN+   Q   L R KAN +A  G Y  G A  G G   SL V ++ Y
Sbjct:  229 LKPNMVTAGQSAKKNTPEEIALATVQALRRTVPAAVTGVTFLSGGQSEEEATVNLSAINNVPLIRPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLKRAKANGDAAQGKYVAGSAGAGSG---SLFVANHAY 361          
BLAST of CN188888 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 3.553e-33
Identity = 74/136 (54.41%), Postives = 96/136 (70.59%), Query Frame = -3
Query:  298 LKPNMVTPGSEAP-KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKP+MVTPG+E   + TPE ++++T++ L R +P AVP ++FLSGGQSE EAT+NLNAMNQ     PW +SFS+ RALQ + LK W G+ ENV+ AQ A L+R KANS A LG Y  D +  E A E + VK+Y Y
Sbjct:  256 LKPSMVTPGAECKDRATPEQVSDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAE-AKEGMFVKNYVY 388          
BLAST of CN188888 vs. ExPASy Swiss-Prot
Match: ALF_ECHMU (Fructose-bisphosphate aldolase OS=Echinococcus multilocularis GN=FBPA PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.641e-33
Identity = 78/136 (57.35%), Postives = 94/136 (69.12%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVT G    K  + E  A  TV ALQRT+P AVP VVFLSGGQSE +ATRNLNA+N+   KKPW+LSFSFGRALQ S + AW GK ENV+  QA FL   KAN  A+LG ++G+ +   G  +SL V ++ Y
Sbjct:  229 LKPNMVTCGQSCTKKYSVEDNARATVEALQRTVPVAVPGVVFLSGGQSELDATRNLNAINKYPGKKPWALSFSFGRALQASAIAAWQGKPENVKAGQAEFLQLAKANGAASLGKFEGELKTAAG-QKSLFVANHAY 363          
BLAST of CN188888 vs. ExPASy Swiss-Prot
Match: ALDOB_SPAAU (Fructose-bisphosphate aldolase B OS=Sparus aurata GN=aldob PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.034e-32
Identity = 70/136 (51.47%), Postives = 90/136 (66.18%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPK-VTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPG   PK  TP+ +A  TV AL+RT+PA+VP + FLSGGQSEEEA+ +LNA+NQ+   +PW L+FS+GRALQ S L AW GK+ N    Q  F+ R K N  A+ G YK      + + +SL+   Y Y
Sbjct:  229 LKPNMVTPGHSCPKKFTPQEVAMATVTALRRTVPASVPGICFLSGGQSEEEASIHLNAINQVPLHRPWKLTFSYGRALQASALAAWQGKDANKAATQQVFVTRAKINGLASKGEYKPSGSADQASQQSLYTASYVY 364          
The following BLAST results are available for this feature:
BLAST of CN188888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF_DICDI5.482e-3457.35Fructose-bisphosphate aldolase OS=Dictyostelium di... [more]
ALDOC_MACFA9.351e-3453.68Fructose-bisphosphate aldolase C OS=Macaca fascicu... [more]
ALDOC_HUMAN1.221e-3353.68Fructose-bisphosphate aldolase C OS=Homo sapiens G... [more]
ALDOA_RAT1.221e-3355.88Fructose-bisphosphate aldolase A OS=Rattus norvegi... [more]
ALFC1_ARATH1.595e-3355.88Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALF1_CAEEL1.595e-3355.47Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALF_DROME3.553e-3357.35Fructose-bisphosphate aldolase OS=Drosophila melan... [more]
ALFC_ORYSJ3.553e-3354.41Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALF_ECHMU4.641e-3357.35Fructose-bisphosphate aldolase OS=Echinococcus mul... [more]
ALDOB_SPAAU1.034e-3251.47Fructose-bisphosphate aldolase B OS=Sparus aurata ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006P14_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006P14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188888 ID=CN188888; Name=CN188888; organism=Citrus sinensis; type=EST; length=704bp
TTTTTTTTTTTTTTTTTAATAAGCACAAGAAAACATTATCAATCTCTTTG
ACAAAATCACAGAAATTTAGCGCCATTAGGGGAAAAGGAAAAAAAAAACA
AAAACAAAAGCATAAACAGTTTTCAGTTTAGTTTTGATCAAAACCACTCA
AACCGAAGTTCCCAAGCTTTTTATTGCTCCACCTAATATGAAAAAGCCCT
AAAACTATGAATGAGAATGTGCCAACCTAATGTTCATACCGCCATTTACT
CTCATAAAGTTCATAAAGCACAACACCCAAAGCTTCAACTGTGCTTAGTA
TTTGTAGTCCTTGACATGGAGAGACTCTGCGGCACCTTCACCAAGCTGGG
CATCGCCCTTGTAAGTACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTG
ACAAGGAAAGCAGCCTGGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCA
TGCCTTGAGAGTGCTCTGCTGAAGTGCACGTCCAAAGGAAAAGGAAAGTG
ACCATGGCTTCTTCGTCTTGAGCTGGTTCATGGCATTAAGGTTGCGGGTA
GCCTCCTCCTCACTCTGCCCACCAGACAAGAACACAACAGCAGGAACTGC
TGCAGGCATAGTGCGTTGCAGGGCCCGGACAGTGTGTTCAGCAATCACCT
CCGGTGTAACTTTGGGAGCTTCAGATCCAGGGGTCACCATGTTGGGCTTC
AAAA
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