CN182106

Overview
NameCN182106
Unique NameCN182106
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182106 vs. ExPASy Swiss-Prot
Match: PEM4_PHACH (Manganese peroxidase H4 OS=Phanerochaete chrysosporium PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 49/146 (33.56%), Postives = 69/146 (47.26%), Query Frame = 1
Query:  118 GGPFGTMRL--AAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGV-EVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFE-GPWTRNPLIFDNSYFTELL 543
            GG  G+M      E   SAN+G+D +V  L PF ++  TIS ADL Q AG V +    G P + F  GR +   P  EG +P+ +     + Q F      S  ++V+L   HT+ R  K     +  P+   P  FD   F E+L
Sbjct:   85 GGADGSMLHFPTIEPNFSANSGIDDSVNNLLPFMQKHDTISAADLVQFAGAVALSNCPGAPRLEFMAGRPNTTIPAVEGLIPEPQDSVTKILQRFEDAGNFSPFEVVSLLASHTVARADKVDETIDAAPFDSTPFTFDTQVFLEVL 230          
BLAST of CN182106 vs. ExPASy Swiss-Prot
Match: KATG_STRRE (Catalase-peroxidase OS=Streptomyces reticuli GN=katG PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 63/181 (34.81%), Postives = 81/181 (44.75%), Query Frame = 1
Query:   49 NCAPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP-------PQEGRLPDAK-QGNDHLRQVFGA-QMGL------------------------------SDKDIVAL-SGGHTLGRCH 465
            N  PLM+R+AWHSAGTY +    GG   G  R A   +   N  LD A RLL P K+++  +IS+ADL  L G V +E  G     F  GR D  E        P+   L D +  G+  L    GA QMGL                              +D++ VAL +GGHT G+ H
Sbjct:   98 NYGPLMIRMAWHSAGTYRISDGRGGAGAGQQRFAPLNSWPDNGNLDKARRLLWPVKKKYGQSISWADLLILTGNVALETMGFKTFGFGGGRADVWEAEEDVYWGPETTWLDDRRYTGDRELENPLGAVQMGLIYVNPEGPNGNPDPIAAARDIRETFRRMAMNDEETVALIAGGHTFGKTH 278          
BLAST of CN182106 vs. ExPASy Swiss-Prot
Match: KATG_CAUCR (Catalase-peroxidase OS=Caulobacter crescentus GN=katG PE=3 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 58/177 (32.77%), Postives = 81/177 (45.76%), Query Frame = 1
Query:   61 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP------PQEGRL--------------------------PDAKQGND-------HLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 465
            L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   +S+ADLY L G V +E  G     F  GR D+ EP      P+   L                          P+   GN         +R+ F A+M ++D++ VAL +GGHT G+ H
Sbjct:   89 LFIRLAWHAAGTYRITDGRGGAGGGQQRFAPLNSWPDNTNLDKARRLLWPIKQKYGAKLSWADLYVLVGNVALESMGFKTFGFAGGRADQWEPEELYWGPESTWLDDKRYSGERELDSPLGAVQMGLIYVNPEGPNGNPDPLASARDIRETF-ARMAMNDEETVALIAGGHTFGKAH 264          
BLAST of CN182106 vs. ExPASy Swiss-Prot
Match: KATG_SOLUE (Catalase-peroxidase OS=Solibacter usitatus (strain Ellin6076) GN=katG PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.260e-11
Identity = 63/176 (35.80%), Postives = 80/176 (45.45%), Query Frame = 1
Query:   61 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP------PQEGRLPDAK-QGNDHLRQVFGA-QMGL------------------------------SDKDIVAL-SGGHTLGRCH 465
            LM+R+AWHSAGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G     F  GR D  EP      P+   L D +  G   L +  GA QMGL                              +D++ VAL +GGHT G+ H
Sbjct:   99 LMIRMAWHSAGTYRITDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPVKQKYGDKISWADLMVLAGNVALESMGFKTFGFAGGRSDVWEPEELYWGPEGTWLGDERYSGERQLSEPLGAVQMGLIYVNPEGPNGNPDPVAAAKDIRETFFRMAMNDEETVALIAGGHTFGKTH 274          
BLAST of CN182106 vs. ExPASy Swiss-Prot
Match: KATG_BORA1 (Catalase-peroxidase OS=Bordetella avium (strain 197N) GN=katG PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.260e-11
Identity = 59/155 (38.06%), Postives = 74/155 (47.74%), Query Frame = 1
Query:   58 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQ--GNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPL 510
            PL +R+AWHSAGTY V    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ L G V +E  G     F  GR+D  EP Q+    D K   G D        + G ++   VA   GH  G+ H    G  G    NPL
Sbjct:   84 PLFIRMAWHSAGTYRVGDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKKKYGNKISWADLFILTGNVALETMGFKTFGFGGGREDTWEPDQDVYWGDEKTWLGGD-------LRYGKNEAQPVADKAGH--GKEHGRTDG--GRNLENPL 227          
BLAST of CN182106 vs. ExPASy Swiss-Prot
Match: KATG_RHOP5 (Catalase-peroxidase OS=Rhodopseudomonas palustris (strain BisA53) GN=katG PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.149e-11
Identity = 61/176 (34.66%), Postives = 80/176 (45.45%), Query Frame = 1
Query:   61 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP------PQEGRLPDAK-QGNDHLRQVFGA-QMGL------------------------------SDKDIVAL-SGGHTLGRCH 465
            L +R+AWHSAGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ L+G V +E  G     F  GR D  EP      P+   L D++  G   L    GA QMGL                              +D++ VAL +GGHT G+ H
Sbjct:   90 LFIRLAWHSAGTYRISDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGNKISWADLFVLSGNVALESMGFKTFGFAGGRADTWEPEELYWGPEGTWLGDSRYSGERELSDPLGAVQMGLIYVNPEGPNGNPDPVGSAKDIRETFYRMAMNDEETVALIAGGHTFGKTH 265          
BLAST of CN182106 vs. ExPASy Swiss-Prot
Match: KATG_NOVAD (Catalase-peroxidase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=katG PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.149e-11
Identity = 69/243 (28.40%), Postives = 91/243 (37.45%), Query Frame = 1
Query:   58 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ-----------------EGRL---------------PDAKQGN-------DHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKER------------------------------------SGFEGPWTRNPLIFDNSYFTELLTGE 552
            P  +R+AWHSAGTY      GG   G  R     +   N  LD A RLL P K+++   IS+ADL  L G V +E  G     F  GR D  E  Q                 + +L               P+   GN         +R+ FG +M ++D++ VAL +GGHT G+ H  R                                    SG EG WT NP+ +   Y   L   E
Sbjct:  109 PFFIRMAWHSAGTYRTADGRGGAGGGQQRFEPLNSWPDNVNLDKARRLLWPIKQKYGRKISWADLMVLTGNVALESMGFKTFGFAGGRADDWEADQVFWGPENKWLADQRYHGDRKLQNPLAAVQMGLIYVNPEGPNGNPDPLLAAKDIRETFG-RMAMNDEETVALIAGGHTFGKAHGARKPEGCVGVDPAAGAVEDQGLGWNNKCGKGNAEDTVSSGLEGAWTANPIAWTTQYLDNLYAFE 350          
BLAST of CN182106 vs. ExPASy Swiss-Prot
Match: KATG3_MYCS2 (Catalase-peroxidase 3 OS=Mycobacterium smegmatis GN=katG3 PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.149e-11
Identity = 67/245 (27.35%), Postives = 92/245 (37.55%), Query Frame = 1
Query:   58 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDK---------------------------------------AEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH------------------------------------KERSGFEGPWTRNPLIFDNSYFTELLTGEKD 558
            PL+LR+AWH AGTY +    GG   G +R A   +   N  LD A RLL P K+++   IS++DL   AG   +E  G     F  GR+D                                         +P     LPD       +R+ F  +MG++D++ VAL +GGHT G+ H                                       SG +G WT  P  +D S+ T L   E D
Sbjct:   99 PLVLRMAWHFAGTYRIGDGRGGAGAGMLRFAPLNSFPDNRNLDKARRLLWPVKKKYGRKISWSDLMIFAGNRALESMGCRTFGFAGGREDAWEADETYWGPESTWLADERHSGVRDLDQPLAASEMGLIYVDPQGPATLPDPLASARDIRETF-RRMGMNDEETVALIAGGHTFGKSHGPTDPSRCLGPEPEGAPLEALGLGWVNSFGTGNGADTVTSGLDGIWTATPTKWDMSFLTTLFAYEWD 342          
BLAST of CN182106 vs. ExPASy Swiss-Prot
Match: PEM3_PHACH (Manganese peroxidase H3 OS=Phanerochaete chrysosporium PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11
Identity = 48/166 (28.92%), Postives = 76/166 (45.78%), Query Frame = 1
Query:   64 MLRIAWHSAGTYDVKT--KTGGPFGTMRL--AAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGV-EVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFE-GPWTRNPLIFDNSYFTELL 543
            ++R+ +H A           GG  G+M L    E   SANNG+D +V  L PF ++  TIS  D+ Q  G V +    G P + F   R +K  P  +G +P+ +     + + F      S  ++V+L   H++ R  K     +  P+   P +FD   F E+L
Sbjct:   65 VIRLTFHDAIAISQSKGPSAGGADGSMLLFPTIEPNFSANNGIDDSVNNLIPFMQKHNTISAGDIVQFTGAVALTNCPGAPQLEFLARRPNKTIPAIDGLIPEPQDSVTSILERFKDAGNFSPFEVVSLLASHSVARADKVDETIDAAPFDTTPFVFDTQIFLEVL 230          
BLAST of CN182106 vs. ExPASy Swiss-Prot
Match: KATG2_CELJU (Catalase-peroxidase 2 OS=Cellvibrio japonicus (strain Ueda107) GN=katG2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11
Identity = 68/243 (27.98%), Postives = 92/243 (37.86%), Query Frame = 1
Query:   58 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP------PQEGRLPDAKQGNDH---------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH----------KE--------------------------RSGFEGPWTRNPLIFDNSYFTELLTGE 552
            P  +R+AWHSAGTY +    GG   G  R     +   N  LD A RLL P K+++  +IS+ADL  L G V +E  G     F  GR D  E       P++  L D +   D                                  +R  FG +M ++D++ VAL +GGHT G+ H          KE                           SG EG W+ NP+ +   Y   L   E
Sbjct:   99 PFFIRMAWHSAGTYRIYDGRGGAGGGQQRFEPLNSWPDNVNLDRARRLLWPIKQKYGSSISWADLMVLTGNVALESMGFKTFGFAGGRQDDWEADTVYWGPEKKWLDDKRYSGDRTLEKPLAAVQMGLIYVNPEGPNGVPDPLLAAKDIRDTFG-RMAMNDEETVALIAGGHTFGKAHGAHKPETCLGKEPAAAGIEEQGLGWTNKCGKGNAEDTITSGLEGAWSVNPIAWTTQYLDNLFAFE 340          
The following BLAST results are available for this feature:
BLAST of CN182106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
PEM4_PHACH7.385e-1233.56Manganese peroxidase H4 OS=Phanerochaete chrysospo... [more]
KATG_STRRE7.385e-1234.81Catalase-peroxidase OS=Streptomyces reticuli GN=ka... [more]
KATG_CAUCR7.385e-1232.77Catalase-peroxidase OS=Caulobacter crescentus GN=k... [more]
KATG_SOLUE1.260e-1135.80Catalase-peroxidase OS=Solibacter usitatus (strain... [more]
KATG_BORA11.260e-1138.06Catalase-peroxidase OS=Bordetella avium (strain 19... [more]
KATG_RHOP52.149e-1134.66Catalase-peroxidase OS=Rhodopseudomonas palustris ... [more]
KATG_NOVAD2.149e-1128.40Catalase-peroxidase OS=Novosphingobium aromaticivo... [more]
KATG3_MYCS22.149e-1127.35Catalase-peroxidase 3 OS=Mycobacterium smegmatis G... [more]
PEM3_PHACH2.806e-1128.92Manganese peroxidase H3 OS=Phanerochaete chrysospo... [more]
KATG2_CELJU2.806e-1127.98Catalase-peroxidase 2 OS=Cellvibrio japonicus (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001P10_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001P10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182106 ID=CN182106; Name=CN182106; organism=Citrus sinensis; type=EST; length=688bp
GCCGGGGAGAAATGCAAGAGGAAGCTCAGAGGCTTCATCGCTGAGAAGAA
CTGCGCTCCACTCATGCTCCGTATCGCGTGGCACTCAGCTGGTACATATG
ATGTGAAGACCAAGACCGGAGGTCCATTCGGAACCATGAGGCTCGCTGCT
GAGCAGGCACACTCAGCCAACAACGGCCTCGATATTGCCGTTAGGCTTTT
GGAGCCGTTCAAGGAGCAGTTCCCTACCATCTCCTACGCTGACCTTTATC
AGCTTGCTGGTGTTGTTGGCGTTGAGGTTACCGGTGGGCCCGATATCCCC
TTCCACCCTGGAAGAGATGACAAGGCTGAGCCACCTCAAGAAGGCCGGCT
TCCTGATGCTAAACAGGGTAATGATCACTTGAGGCAAGTCTTTGGTGCTC
AGATGGGCCTCAGCGACAAGGATATTGTTGCTCTCTCTGGTGGCCACACC
CTGGGAAGGTGCCACAAGGAGAGGTCTGGATTTGAGGGACCATGGACCCG
CAACCCTCTCATTTTTGACAATTCCTACTTCACGGAGCTCTTGACTGGTG
AGAAGGATGGTCTTCTGCAATTGCCATCCGACAAGGCCCCTTCTGGATGA
CCCTGTTTTCCGCCCTCTTGTTGAGAAATATGCTGCGGAAGAAGACGCTT
TCTTCGCTGATTATGCTGAGGCTCATCTCAAGCTCTCT
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