CN188884
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_DESRM (50S ribosomal protein L1 OS=Desulfotomaculum reducens (strain MI-1) GN=rplA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.729e-34 Identity = 67/134 (50.00%), Postives = 89/134 (66.42%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 AD VG +D++E+I+GG++ FD IA+PDMM V LG++LGPRGLMPNPK GTVT + A+ + K GK+ YR DK GI+H P GKA F L NF ++ KP AKG Y K+ + S+MGP +R+N Sbjct: 92 ADFVGAEDMLEKIQGGWLGFDVAIATPDMMGTVGRLGRVLGPRGLMPNPKTGTVTFEVGDAVRDAKGGKITYRTDKVGIIHAPIGKASFDTQKLAENFKTLADTLVRIKPASAKGTYMKTITVSSTMGPGVRIN 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_DESAP (50S ribosomal protein L1 OS=Desulforudis audaxviator (strain MP104C) GN=rplA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.729e-34 Identity = 66/139 (47.48%), Postives = 94/139 (67.63%), Query Frame = -1 Query: 349 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEML 765 AD VGG++++ +I+GG+MEFD IA+PDMM V +G+ILGPRGLMPNPK GTVT +I +A+ E K GK++YR DK G +H P GK F + L N + ++ KP AKG Y + + S+MGP +R+N ++ + Sbjct: 92 ADYVGGEEMVAKIQGGWMEFDVAIATPDMMSAVGKIGRILGPRGLMPNPKTGTVTFDIARAVAEVKAGKIQYRVDKAGNIHAPIGKVSFEVEKLEENLKTLIDALIRAKPAAAKGQYLRGIVVTSTMGPGVRVNTRKFI 230
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_CLOD6 (50S ribosomal protein L1 OS=Clostridium difficile (strain 630) GN=rplA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.729e-34 Identity = 68/135 (50.37%), Postives = 97/135 (71.85%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKG-GFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 AD VG ++L+++I+G + +FD ++A+PDMM V LG++LGP+GLMPNPK+GTVT ++ +AI+E K GKVEYR DKT I+H+P GK F + L NF A + +I KP AKG Y +S + SSMGP +++N Sbjct: 92 ADFVGAEELVQKIQGENWFDFDIVVATPDMMGVVGRLGRVLGPKGLMPNPKSGTVTFDVAKAIDEIKAGKVEYRLDKTNIIHVPVGKVSFGGEKLTENFTALMDAIIKAKPAAAKGQYLRSITVASSMGPGVKIN 226
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_THETN (50S ribosomal protein L1 OS=Thermoanaerobacter tengcongensis GN=rplA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.871e-34 Identity = 68/135 (50.37%), Postives = 97/135 (71.85%), Query Frame = -1 Query: 364 ADLVGGDDLIEQI-KGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 AD VG ++L+E+I K + ++D +IA+PDMM V LGK+LGP+GLMPNPK+GTVT + +A++E K GK+EYR DK GI+H+P GK F ++ LL NF + +I +KP AKG Y KS + S+MGP +++N Sbjct: 91 ADYVGAEELVEKIQKENWFDYDVVIATPDMMGVVGRLGKLLGPKGLMPNPKSGTVTFEVEKAVKEAKAGKIEYRIDKAGIIHVPIGKKSFGKEKLLENFRTVMDAIIKSKPAAAKGQYIKSVVLSSTMGPGVKVN 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_RICAH (50S ribosomal protein L1 OS=Rickettsia akari (strain Hartford) GN=rplA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.871e-34 Identity = 68/135 (50.37%), Postives = 97/135 (71.85%), Query Frame = -1 Query: 361 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNI 765 ADLVG ++I++IK G + FD IA+PDMM + S+ +ILGP+GLMPNPK GTVT +I AI+ K G+VEYRA+K+GI+H GK FS+ DLL N A ++++ KP G KG Y K+ Y+ S+MG S+++++ Sbjct: 101 ADLVGSTNIIDEIKSGKINFDVCIATPDMMAAIGSVARILGPKGLMPNPKLGTVTLDIKNAIKNAKSGQVEYRAEKSGIIHAGLGKLSFSDQDLLKNLNAFIEAVIKAKPSGLKGSYLKAMYLSSTMGASVQIDL 235
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_MARMM (50S ribosomal protein L1 OS=Maricaulis maris (strain MCS10) GN=rplA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.871e-34 Identity = 69/134 (51.49%), Postives = 95/134 (70.90%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 AD+VG +DL+EQI+GG + FDK+IA+PDMM V LGK+LGPRG+MPNPK GTVT + +A+ + K G VE+R +K GI+H GKA F+E L N A V +I KP GAKG+Y + + S+MGP ++++ Sbjct: 92 ADVVGAEDLMEQIQGGNINFDKVIATPDMMPLVGRLGKVLGPRGMMPNPKVGTVTMGVTKAVNDSKGGAVEFRVEKAGIIHAGVGKASFTEAALAENVRALVDAIVKAKPSGAKGLYVRRIALSSTMGPGVKID 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_LEGPL (50S ribosomal protein L1 OS=Legionella pneumophila (strain Lens) GN=rplA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.871e-34 Identity = 68/138 (49.28%), Postives = 95/138 (68.84%), Query Frame = -1 Query: 352 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 765 AD+VG +DL ++IK G M FD +IA+PD M V LG+ILGPRGLMPNPK GTVTTN+ A+ + K G+V YR DK GI+H GKADF+ +D+L N +A + ++ KP +KG Y K + ++MGP + ++I + Sbjct: 92 ADIVGFEDLADKIKAGEMNFDVVIATPDAMRIVGQLGQILGPRGLMPNPKVGTVTTNVEAAVNDAKSGQVRYRTDKNGIIHCTVGKADFAPEDVLENVVALINDLKKAKPASSKGQYLKKISLSTTMGPGLPIDISSI 229
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_LEGPH (50S ribosomal protein L1 OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=rplA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.871e-34 Identity = 68/138 (49.28%), Postives = 95/138 (68.84%), Query Frame = -1 Query: 352 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 765 AD+VG +DL ++IK G M FD +IA+PD M V LG+ILGPRGLMPNPK GTVTTN+ A+ + K G+V YR DK GI+H GKADF+ +D+L N +A + ++ KP +KG Y K + ++MGP + ++I + Sbjct: 92 ADIVGFEDLADKIKAGEMNFDVVIATPDAMRIVGQLGQILGPRGLMPNPKVGTVTTNVEAAVNDAKSGQVRYRTDKNGIIHCTVGKADFAPEDVLENVVALINDLKKAKPASSKGQYLKKISLSTTMGPGLPIDISSI 229
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_LEGPC (50S ribosomal protein L1 OS=Legionella pneumophila (strain Corby) GN=rplA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.871e-34 Identity = 68/138 (49.28%), Postives = 95/138 (68.84%), Query Frame = -1 Query: 352 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 765 AD+VG +DL ++IK G M FD +IA+PD M V LG+ILGPRGLMPNPK GTVTTN+ A+ + K G+V YR DK GI+H GKADF+ +D+L N +A + ++ KP +KG Y K + ++MGP + ++I + Sbjct: 92 ADIVGFEDLADKIKAGEMNFDVVIATPDAMRIVGQLGQILGPRGLMPNPKVGTVTTNVEAAVNDAKSGQVRYRTDKNGIIHCTVGKADFAPEDVLENVVALINDLKKAKPASSKGQYLKKISLSTTMGPGLPIDISSI 229
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_LEGPA (50S ribosomal protein L1 OS=Legionella pneumophila (strain Paris) GN=rplA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.871e-34 Identity = 68/138 (49.28%), Postives = 95/138 (68.84%), Query Frame = -1 Query: 352 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 765 AD+VG +DL ++IK G M FD +IA+PD M V LG+ILGPRGLMPNPK GTVTTN+ A+ + K G+V YR DK GI+H GKADF+ +D+L N +A + ++ KP +KG Y K + ++MGP + ++I + Sbjct: 92 ADIVGFEDLADKIKAGEMNFDVVIATPDAMRIVGQLGQILGPRGLMPNPKVGTVTTNVEAAVNDAKSGQVRYRTDKNGIIHCTVGKADFAPEDVLENVVALINDLKKAKPASSKGQYLKKISLSTTMGPGLPIDISSI 229 The following BLAST results are available for this feature:
BLAST of CN188884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188884 ID=CN188884; Name=CN188884; organism=Citrus sinensis; type=EST; length=765bpback to top |