Homology
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match:
RK1_ARATH (50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana GN=RPL1 PE=1 SV=1)
HSP 1 Score: 265.003 bits (676), Expect = 3.230e-70
Identity = 127/145 (87.59%), Postives = 139/145 (95.86%), Query Frame = -1
Query: 331 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKLPS 765
AD+VG DDLIEQIKGGFMEFDKLIASPDMMVKVA LGKILGPRGLMPNPKAGTVT NIPQAIEEFKKGKVE+RADKTGIVHIPFGK +F+E+DLLINFLAAVKS+E NKPKGAKGVYWKSA+ICSSMGPSI+LNI+EM+D+K P+
Sbjct: 200 ADIVGSDDLIEQIKGGFMEFDKLIASPDMMVKVAGLGKILGPRGLMPNPKAGTVTANIPQAIEEFKKGKVEFRADKTGIVHIPFGKVNFTEEDLLINFLAAVKSVETNKPKGAKGVYWKSAHICSSMGPSIKLNIREMIDFKPPT 344
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match:
RK1_SPIOL (50S ribosomal protein L1, chloroplastic OS=Spinacia oleracea GN=RPL1 PE=1 SV=1)
HSP 1 Score: 243.817 bits (621), Expect = 7.705e-64
Identity = 116/146 (79.45%), Postives = 131/146 (89.73%), Query Frame = -1
Query: 328 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKLPSN 765
AD+VGG++LIEQIKGGFM+FDKLIA+ DMM KVASLG+ILGPRGLMP PKAGTVT N+ QA+EEFKKGKVE+R DKTGIVHIPFGK +F E+DLLIN A +KS+E NKP GAKGVYWKSA+I SSMGPSIRLNI+EMLDYK PSN
Sbjct: 206 ADIVGGEELIEQIKGGFMDFDKLIATSDMMAKVASLGRILGPRGLMPTPKAGTVTPNVAQAVEEFKKGKVEFRVDKTGIVHIPFGKLNFEEEDLLINLFATIKSVETNKPTGAKGVYWKSAHISSSMGPSIRLNIREMLDYKPPSN 351
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match:
RK1_RHDSA (50S ribosomal protein L1, chloroplastic OS=Rhodomonas salina GN=rpl1 PE=3 SV=1)
HSP 1 Score: 191.815 bits (486), Expect = 3.475e-48
Identity = 91/140 (65.00%), Postives = 113/140 (80.71%), Query Frame = -1
Query: 346 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 765
ADL G +DLI+ I G ++FD+LIA+PDMM +A LGK+LGPRGLMP+PK+GTVT +I +AI+EFKKGK+EYRADK+GIVHI FGK DFS +DLL N A +SI+ N+P G KG YWKS YICS+MGPSI+L+I E D
Sbjct: 91 ADLAGAEDLIQNIMKGDLDFDRLIATPDMMPAIAKLGKVLGPRGLMPSPKSGTVTADIKEAIDEFKKGKLEYRADKSGIVHILFGKTDFSVEDLLANLEAVQESIDKNRPSGVKGRYWKSFYICSTMGPSIQLDISEFRD 230
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match:
RK1_GUITH (50S ribosomal protein L1, chloroplastic OS=Guillardia theta GN=rpl1 PE=3 SV=1)
HSP 1 Score: 191.045 bits (484), Expect = 5.927e-48
Identity = 89/140 (63.57%), Postives = 113/140 (80.71%), Query Frame = -1
Query: 346 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 765
ADL G DL++ I G ++FD+LIA+PDMM +A LGK+LGPRGLMP+PK+GTVT+++ AIEEFKKGK+EYRADK+GIVHI FGK +FS +DLL+N A +SI+ N+P G KG YWKS YICS+MGPSI+L+I E D
Sbjct: 91 ADLAGSTDLVQDIMKGMLDFDRLIATPDMMPLIAKLGKVLGPRGLMPSPKSGTVTSDVKSAIEEFKKGKLEYRADKSGIVHISFGKTNFSVNDLLLNLEAVQESIDKNRPAGVKGKYWKSFYICSTMGPSIQLDISEFRD 230
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match:
RL1_THEEB (50S ribosomal protein L1 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplA PE=3 SV=1)
HSP 1 Score: 186.808 bits (473), Expect = 1.118e-46
Identity = 86/143 (60.14%), Postives = 119/143 (83.22%), Query Frame = -1
Query: 337 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 765
AD+VG ++LI++I+ G M+FD LIA+PDMM +VA +G+ILGPRGLMP+PKAGTVT ++PQAI+EFK GKVE+RAD++GIVH+ FGKA FS +DLL+N A +SI+ N+P GAKG YW+S Y+ ++MGPSI+++I + + KL
Sbjct: 91 ADVVGSEELIDEIQKGRMDFDLLIATPDMMPQVAKVGRILGPRGLMPSPKAGTVTFDLPQAIQEFKAGKVEFRADRSGIVHVLFGKASFSAEDLLVNLKALQESIDRNRPSGAKGRYWRSVYVAATMGPSIQVDINALRELKL 233
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match:
RL1_ANASP (50S ribosomal protein L1 OS=Anabaena sp. (strain PCC 7120) GN=rplA PE=3 SV=1)
HSP 1 Score: 185.267 bits (469), Expect = 3.252e-46
Identity = 85/143 (59.44%), Postives = 117/143 (81.82%), Query Frame = -1
Query: 337 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 765
AD+VG ++LI++I+ G M+FDKLIA+PD+M +VA LGK+LGPRGLMP+PK GTVT ++ AI EFK GK+E+RAD+TGIVH+ FGKA FS +DLL+N A ++I+ N+P GAKG YW++ Y+ ++MGPSIR++I + DYKL
Sbjct: 92 ADVVGSEELIDEIQKGRMDFDKLIATPDVMPQVAKLGKMLGPRGLMPSPKGGTVTFDVASAIAEFKAGKLEFRADRTGIVHVMFGKASFSPEDLLVNLKALQETIDRNRPSGAKGRYWRTFYVSATMGPSIRVDINALRDYKL 234
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match:
RL1_ANAVT (50S ribosomal protein L1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplA PE=3 SV=1)
HSP 1 Score: 183.726 bits (465), Expect = 9.462e-46
Identity = 85/143 (59.44%), Postives = 116/143 (81.12%), Query Frame = -1
Query: 337 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 765
AD+ G ++LI++I+ G M+FDKLIA+PD+M +VA LGK+LGPRGLMP+PK GTVT +I AI EFK GK+E+RAD+TGIVH+ FGKA FS +DLL+N A ++I+ N+P GAKG YW++ Y+ ++MGPSIR++I + DYKL
Sbjct: 92 ADVFGSEELIDEIQKGRMDFDKLIATPDVMPQVAKLGKMLGPRGLMPSPKGGTVTFDIASAIAEFKAGKLEFRADRTGIVHVMFGKASFSPEDLLVNLKALQETIDRNRPSGAKGRYWRTFYVSATMGPSIRVDINALRDYKL 234
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match:
RL1_MICAN (50S ribosomal protein L1 OS=Microcystis aeruginosa (strain NIES-843) GN=rplA PE=3 SV=1)
HSP 1 Score: 183.341 bits (464), Expect = 1.236e-45
Identity = 85/143 (59.44%), Postives = 114/143 (79.72%), Query Frame = -1
Query: 337 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 765
AD+VG ++LIE+I G M+F+ LIA+PDMM KVA LG+ LGPRGLMP+PK GTVTT++ AI EFK GK+E+RAD+TGIVH+ FGKA FS +DLL+N A ++++ N+P GAKG YW++ Y+ SSMGPSI+++I + D KL
Sbjct: 92 ADIVGSEELIEEIAKGMMDFEVLIATPDMMPKVAKLGRQLGPRGLMPSPKGGTVTTDLTGAIAEFKAGKLEFRADRTGIVHVQFGKASFSAEDLLVNLKALQETVDRNRPSGAKGRYWRTVYVSSSMGPSIQVDISALRDLKL 234
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match:
RL1_SYNR3 (50S ribosomal protein L1 OS=Synechococcus sp. (strain RCC307) GN=rplA PE=3 SV=1)
HSP 1 Score: 182.956 bits (463), Expect = 1.614e-45
Identity = 84/140 (60.00%), Postives = 110/140 (78.57%), Query Frame = -1
Query: 346 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 765
A+LVG ++L++ I GG M+FD LIA+PDMM KVA LG++LGPRGLMPNPK GTVTT++ AI EFK GK+E+RAD++GIVH+ FGKA FS DDLL N + ++++ NKP GAKG YWKS YI S+MGPS+ ++ + D
Sbjct: 91 AELVGDEELVDSIAGGQMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKTGTVTTDVTNAINEFKAGKLEFRADRSGIVHVQFGKASFSADDLLENLKSVQETVDRNKPSGAKGRYWKSLYITSTMGPSVEVDFSALQD 230
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match:
RL1_PROMS (50S ribosomal protein L1 OS=Prochlorococcus marinus (strain AS9601) GN=rplA PE=3 SV=1)
HSP 1 Score: 182.57 bits (462), Expect = 2.108e-45
Identity = 87/142 (61.27%), Postives = 110/142 (77.46%), Query Frame = -1
Query: 340 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYK 765
ADL G +DL+E I G MEFD LIA+PDMM KVA LG++LGPRGLMPNPKAGTVT +I AI+EFK GK+E+RADK GIVH+ FGKA F+++ L N +SI+ NKP GAKG YWK+ Y+ S+MGPS++L+I + DY+
Sbjct: 91 ADLFGEEDLVESINKGNMEFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTVTNDIANAIKEFKAGKLEFRADKAGIVHVRFGKASFTKEALFDNLKTLQESIDKNKPSGAKGKYWKTFYVTSTMGPSVQLDINAVQDYQ 232
The following BLAST results are available for this feature:
BLAST of CN188884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (
BLAST: Citrus ESTs to SwissProt )
Total hits: 500
100 200 300 400 500 600 700 Expect = 3.23e-70 / Id = 87.59 Expect = 7.70e-64 / Id = 79.45 Expect = 3.47e-48 / Id = 65.00 Expect = 5.93e-48 / Id = 63.57 Expect = 1.12e-46 / Id = 60.14 Expect = 3.25e-46 / Id = 59.44 Expect = 9.46e-46 / Id = 59.44 Expect = 1.24e-45 / Id = 59.44 Expect = 1.61e-45 / Id = 60.00 Expect = 2.11e-45 / Id = 61.27 Sequence RK1_ARATH RK1_SPIOL RK1_RHDSA RK1_GUITH RL1_THEEB RL1_ANASP RL1_ANAVT RL1_MICAN RL1_SYNR3 RL1_PROMS
Match Name E-value Identity Description
RK1_ARATH 3.230e-70 87.59 50S ribosomal protein L1, chloroplastic OS=Arabido... [more]
RK1_SPIOL 7.705e-64 79.45 50S ribosomal protein L1, chloroplastic OS=Spinaci... [more]
RK1_RHDSA 3.475e-48 65.00 50S ribosomal protein L1, chloroplastic OS=Rhodomo... [more]
RK1_GUITH 5.927e-48 63.57 50S ribosomal protein L1, chloroplastic OS=Guillar... [more]
RL1_THEEB 1.118e-46 60.14 50S ribosomal protein L1 OS=Thermosynechococcus el... [more]
RL1_ANASP 3.252e-46 59.44 50S ribosomal protein L1 OS=Anabaena sp. (strain P... [more]
RL1_ANAVT 9.462e-46 59.44 50S ribosomal protein L1 OS=Anabaena variabilis (s... [more]
RL1_MICAN 1.236e-45 59.44 50S ribosomal protein L1 OS=Microcystis aeruginosa... [more]
RL1_SYNR3 1.614e-45 60.00 50S ribosomal protein L1 OS=Synechococcus sp. (str... [more]
RL1_PROMS 2.108e-45 61.27 50S ribosomal protein L1 OS=Prochlorococcus marinu... [more]
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