CN188884
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_BACWK (50S ribosomal protein L1 OS=Bacillus weihenstephanensis (strain KBAB4) GN=rplA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.871e-34 Identity = 64/138 (46.38%), Postives = 95/138 (68.84%), Query Frame = -1 Query: 352 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 765 A+ VG D I +I+ G+ +FD ++A+PDMM +V LG++LGP+GLMPNPK GTVT ++ +A+ E K GKVEYR DK G +H+P GK F + L+ NF +++ KP AKG Y K+A + S+MGP +R+++ + Sbjct: 92 AEFVGDADYIGKIQKGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTFDVTKAVNEIKAGKVEYRVDKAGNIHVPIGKVSFEDAKLVENFKTIADTLQKAKPAAAKGTYMKNATVASTMGPGVRVDVSTL 229
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_BACCR (50S ribosomal protein L1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rplA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.871e-34 Identity = 64/138 (46.38%), Postives = 94/138 (68.12%), Query Frame = -1 Query: 352 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 765 AD VG D I +I+ G+ +FD ++A+PDMM +V LG++LGP+GLMPNPK GTVT ++ +A+ E K GKVEYR DK G +H+P GK F + L+ NF +++ KP AKG Y K+ + S+MGP +R+++ + Sbjct: 94 ADFVGDTDYIGKIQQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTFDVTKAVNEIKAGKVEYRVDKAGNIHVPIGKVSFEDAKLVENFKTIADTLQKVKPAAAKGTYMKNVTVASTMGPGVRVDVSTL 231
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_BACC4 (50S ribosomal protein L1 OS=Bacillus cereus (strain B4264) GN=rplA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.871e-34 Identity = 64/138 (46.38%), Postives = 94/138 (68.12%), Query Frame = -1 Query: 352 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 765 AD VG D I +I+ G+ +FD ++A+PDMM +V LG++LGP+GLMPNPK GTVT ++ +A+ E K GKVEYR DK G +H+P GK F + L+ NF +++ KP AKG Y K+ + S+MGP +R+++ + Sbjct: 92 ADFVGDTDYIGKIQQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTFDVTKAVNEIKAGKVEYRVDKAGNIHVPIGKVSFEDAKLVENFKTIADTLQKVKPAAAKGTYMKNVTVASTMGPGVRVDVSTL 229
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_ACIC5 (50S ribosomal protein L1 OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=rplA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.871e-34 Identity = 69/135 (51.11%), Postives = 94/135 (69.63%), Query Frame = -1 Query: 364 ADLVGGDDLIEQI-KGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 A++VGG++L+E+I K + +FD LIA+PDMM V LGK+LGPRGLMPNPK GTVT ++ A++E K GK+EYR DKT +VH+P GK F + L+ N + + S+ KP AKG Y K + S+MGP I L+ Sbjct: 92 AEIVGGEELVEKIQKESWTDFDALIATPDMMRSVGRLGKVLGPRGLMPNPKTGTVTNDVAAAVKEIKAGKIEYRTDKTALVHVPVGKLSFPAEKLIDNAMTVITSVVRAKPSAAKGKYIKGITLSSTMGPGIPLD 226
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_CAMLR (50S ribosomal protein L1 OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=rplA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.362e-34 Identity = 70/142 (49.30%), Postives = 98/142 (69.01%), Query Frame = -1 Query: 340 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYK 765 AD+VG DDL+E+I+ G M FD LIA+P++M V +G+ILGP+GLMPNPK GTVT ++ QA+ K G+V +R DK G +H GK F+++ L N A VK+I +KP AKG Y K+A + +M PS+ L+ +E+LD K Sbjct: 92 ADIVGSDDLVEEIQKGNMNFDVLIATPNLMGLVGKVGRILGPKGLMPNPKTGTVTMDVAQAVNNAKNGQVNFRVDKQGNIHAGLGKVSFTQEQLKENMSAFVKAINKHKPAAAKGRYIKNASLSLTMSPSLSLDTQELLDTK 233
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_BDEBA (50S ribosomal protein L1 OS=Bdellovibrio bacteriovorus GN=rplA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.362e-34 Identity = 66/133 (49.62%), Postives = 93/133 (69.92%), Query Frame = -1 Query: 367 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRL 765 AD VG DDL+ +I+GG+++FDK IA+PDMM V+ + KILGPRGLMPNPK GTVT N+ +A+ KKGK+++R DK GIVH GK + L NF+ + +I KP +KG+Y +S + S+MGP +++ Sbjct: 90 ADFVGADDLVAKIQGGWLDFDKCIATPDMMATVSKVAKILGPRGLMPNPKIGTVTMNVGEAVTAEKKGKLDFRVDKAGIVHAGIGKKSMGDAKLKDNFMTLLGAIVKAKPASSKGIYLRSIAVASTMGPGVKI 222
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_BACHK (50S ribosomal protein L1 OS=Bacillus thuringiensis subsp. konkukian GN=rplA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.362e-34 Identity = 64/138 (46.38%), Postives = 94/138 (68.12%), Query Frame = -1 Query: 352 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 765 AD VG D I +I+ G+ +FD ++A+PDMM +V LG++LGP+GLMPNPK GTVT ++ +A+ E K GKVEYR DK G +H+P GK F + L+ NF +++ KP AKG Y K+ + S+MGP +R+++ + Sbjct: 92 ADFVGDADYIGKIQQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTFDVTKAVNEIKAGKVEYRVDKAGNIHVPIGKVSFEDAKLVENFRTIADTLQKVKPAAAKGTYMKNVTVASTMGPGVRVDVSTL 229
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_BACCZ (50S ribosomal protein L1 OS=Bacillus cereus (strain ZK / E33L) GN=rplA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.362e-34 Identity = 64/138 (46.38%), Postives = 94/138 (68.12%), Query Frame = -1 Query: 352 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 765 AD VG D I +I+ G+ +FD ++A+PDMM +V LG++LGP+GLMPNPK GTVT ++ +A+ E K GKVEYR DK G +H+P GK F + L+ NF +++ KP AKG Y K+ + S+MGP +R+++ + Sbjct: 92 ADFVGDADYIGKIQQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTFDVTKAVNEIKAGKVEYRVDKAGNIHVPIGKVSFEDAKLVENFRTIADTLQKVKPAAAKGTYMKNVTVASTMGPGVRVDVSTL 229
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_BACCQ (50S ribosomal protein L1 OS=Bacillus cereus (strain Q1) GN=rplA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.362e-34 Identity = 64/138 (46.38%), Postives = 94/138 (68.12%), Query Frame = -1 Query: 352 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 765 AD VG D I +I+ G+ +FD ++A+PDMM +V LG++LGP+GLMPNPK GTVT ++ +A+ E K GKVEYR DK G +H+P GK F + L+ NF +++ KP AKG Y K+ + S+MGP +R+++ + Sbjct: 92 ADFVGDADYIGKIQQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTFDVTKAVNEIKAGKVEYRVDKAGNIHVPIGKVSFEDAKLVENFRTIADTLQKVKPAAAKGTYMKNVTVASTMGPGVRVDVSTL 229
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_BACC7 (50S ribosomal protein L1 OS=Bacillus cereus (strain AH187) GN=rplA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.362e-34 Identity = 64/138 (46.38%), Postives = 94/138 (68.12%), Query Frame = -1 Query: 352 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 765 AD VG D I +I+ G+ +FD ++A+PDMM +V LG++LGP+GLMPNPK GTVT ++ +A+ E K GKVEYR DK G +H+P GK F + L+ NF +++ KP AKG Y K+ + S+MGP +R+++ + Sbjct: 92 ADFVGDADYIGKIQQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTFDVTKAVNEIKAGKVEYRVDKAGNIHVPIGKVSFEDAKLVENFRTIADTLQKVKPAAAKGTYMKNVTVASTMGPGVRVDVSTL 229 The following BLAST results are available for this feature:
BLAST of CN188884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188884 ID=CN188884; Name=CN188884; organism=Citrus sinensis; type=EST; length=765bpback to top |