CN188884
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_LACRJ (50S ribosomal protein L1 OS=Lactobacillus reuteri (strain JCM 1112) GN=rplA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.776e-32 Identity = 64/135 (47.41%), Postives = 90/135 (66.67%), Query Frame = -1 Query: 361 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNI 765 AD VG DDL+E+I+ G+++FD IA+PDMM KV LG++LGP+GLMPNPK GTVT ++ +A+ + K G+V YR D+ G V +PFGK F D L+ N + +P +G Y K A I S+ GPS+ L++ Sbjct: 93 ADFVGDDDLVEKIQDGWLDFDVAIATPDMMPKVGRLGRVLGPKGLMPNPKTGTVTMDVAKAVSDAKAGQVTYRTDRDGNVAVPFGKVSFDTDKLVENLATLEDIVAKARPASVRGTYIKHASISSTFGPSVTLDL 227
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_HAEIN (50S ribosomal protein L1 OS=Haemophilus influenzae GN=rplA PE=3 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 7.776e-32 Identity = 68/134 (50.75%), Postives = 90/134 (67.16%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 ADLVG +DL EQIK G M FD +IASPD M V LG++LGPRGLMPNPK GTVT N+ +A++ K G++ YR DK GI+H GKA+FSE L N A + ++ KP AKG++ K I ++MG + ++ Sbjct: 92 ADLVGMEDLAEQIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKNGIIHTTIGKANFSEVQLKENLQALLAALNKAKPTTAKGIFIKKVSISTTMGAGVAVD 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_HAEIG (50S ribosomal protein L1 OS=Haemophilus influenzae (strain PittGG) GN=rplA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.776e-32 Identity = 68/134 (50.75%), Postives = 90/134 (67.16%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 ADLVG +DL EQIK G M FD +IASPD M V LG++LGPRGLMPNPK GTVT N+ +A++ K G++ YR DK GI+H GKA+FSE L N A + ++ KP AKG++ K I ++MG + ++ Sbjct: 92 ADLVGMEDLAEQIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKNGIIHTTIGKANFSEVQLKENLQALLAALNKAKPTTAKGIFIKKVSISTTMGAGVAVD 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_HAEI8 (50S ribosomal protein L1 OS=Haemophilus influenzae (strain 86-028NP) GN=rplA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.776e-32 Identity = 68/134 (50.75%), Postives = 90/134 (67.16%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 ADLVG +DL EQIK G M FD +IASPD M V LG++LGPRGLMPNPK GTVT N+ +A++ K G++ YR DK GI+H GKA+FSE L N A + ++ KP AKG++ K I ++MG + ++ Sbjct: 92 ADLVGMEDLAEQIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKNGIIHTTIGKANFSEVQLKENLQALLAALNKAKPTTAKGIFIKKVSISTTMGAGVAVD 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_ENTS8 (50S ribosomal protein L1 OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=rplA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.776e-32 Identity = 68/134 (50.75%), Postives = 89/134 (66.42%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 A+LVG +DL EQIK G M FD +IASPD M V LG++LGPRGLMPNPK GTVT N+ +A++ K G+V YR DK GI+H GK DF D L N A + +++ KP AKGVY K + ++MG + ++ Sbjct: 92 AELVGMEDLAEQIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPSSAKGVYIKKVSLSTTMGAGVAVD 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_ANATD (50S ribosomal protein L1 OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=rplA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.776e-32 Identity = 65/135 (48.15%), Postives = 96/135 (71.11%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKG-GFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 AD VG ++L+ +I+ G+ +FD IA+PDMM V LGKILGP+GLMPNPK+GTVT ++ +A++E K G+VE+R DKT I+H P GK F ++ LL N+ +++I +P AKG + KS + ++MGP I++N Sbjct: 91 ADYVGAEELVAKIQNEGWTDFDVCIATPDMMGLVGRLGKILGPKGLMPNPKSGTVTMDVAKAVKEAKAGRVEFRLDKTAIIHCPIGKVSFGKEKLLENYRTLIEAIIKARPAAAKGQFIKSITVATTMGPGIKIN 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_YERPY (50S ribosomal protein L1 OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=rplA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.016e-31 Identity = 68/134 (50.75%), Postives = 89/134 (66.42%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 A+LVG DDL +QIK G M FD +IASPD M V LG+ILGPRGLMPNPK GTVT N+ +A++ K G+V YR DK GI+H GK DF D L N + V +++ KP AKG+Y K + ++MG + ++ Sbjct: 92 AELVGMDDLADQIKKGEMNFDVVIASPDAMRVVGQLGQILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDSDKLKENLESLVVALKKAKPATAKGIYIKKISLSTTMGAGVAID 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_YERPS (50S ribosomal protein L1 OS=Yersinia pseudotuberculosis GN=rplA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.016e-31 Identity = 68/134 (50.75%), Postives = 89/134 (66.42%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 A+LVG DDL +QIK G M FD +IASPD M V LG+ILGPRGLMPNPK GTVT N+ +A++ K G+V YR DK GI+H GK DF D L N + V +++ KP AKG+Y K + ++MG + ++ Sbjct: 92 AELVGMDDLADQIKKGEMNFDVVIASPDAMRVVGQLGQILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDSDKLKENLESLVVALKKAKPATAKGIYIKKISLSTTMGAGVAID 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_YERPP (50S ribosomal protein L1 OS=Yersinia pestis (strain Pestoides F) GN=rplA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.016e-31 Identity = 68/134 (50.75%), Postives = 89/134 (66.42%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 A+LVG DDL +QIK G M FD +IASPD M V LG+ILGPRGLMPNPK GTVT N+ +A++ K G+V YR DK GI+H GK DF D L N + V +++ KP AKG+Y K + ++MG + ++ Sbjct: 92 AELVGMDDLADQIKKGEMNFDVVIASPDAMRVVGQLGQILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDSDKLKENLESLVVALKKAKPATAKGIYIKKISLSTTMGAGVAID 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_YERPN (50S ribosomal protein L1 OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=rplA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.016e-31 Identity = 68/134 (50.75%), Postives = 89/134 (66.42%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 A+LVG DDL +QIK G M FD +IASPD M V LG+ILGPRGLMPNPK GTVT N+ +A++ K G+V YR DK GI+H GK DF D L N + V +++ KP AKG+Y K + ++MG + ++ Sbjct: 92 AELVGMDDLADQIKKGEMNFDVVIASPDAMRVVGQLGQILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDSDKLKENLESLVVALKKAKPATAKGIYIKKISLSTTMGAGVAID 225 The following BLAST results are available for this feature:
BLAST of CN188884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188884 ID=CN188884; Name=CN188884; organism=Citrus sinensis; type=EST; length=765bpback to top |