CN188884
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_YERPG (50S ribosomal protein L1 OS=Yersinia pestis bv. Antiqua (strain Angola) GN=rplA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.016e-31 Identity = 68/134 (50.75%), Postives = 89/134 (66.42%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 A+LVG DDL +QIK G M FD +IASPD M V LG+ILGPRGLMPNPK GTVT N+ +A++ K G+V YR DK GI+H GK DF D L N + V +++ KP AKG+Y K + ++MG + ++ Sbjct: 92 AELVGMDDLADQIKKGEMNFDVVIASPDAMRVVGQLGQILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDSDKLKENLESLVVALKKAKPATAKGIYIKKISLSTTMGAGVAID 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_YERPE (50S ribosomal protein L1 OS=Yersinia pestis GN=rplA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.016e-31 Identity = 68/134 (50.75%), Postives = 89/134 (66.42%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 A+LVG DDL +QIK G M FD +IASPD M V LG+ILGPRGLMPNPK GTVT N+ +A++ K G+V YR DK GI+H GK DF D L N + V +++ KP AKG+Y K + ++MG + ++ Sbjct: 92 AELVGMDDLADQIKKGEMNFDVVIASPDAMRVVGQLGQILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDSDKLKENLESLVVALKKAKPATAKGIYIKKISLSTTMGAGVAID 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_YERPB (50S ribosomal protein L1 OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=rplA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.016e-31 Identity = 68/134 (50.75%), Postives = 89/134 (66.42%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 A+LVG DDL +QIK G M FD +IASPD M V LG+ILGPRGLMPNPK GTVT N+ +A++ K G+V YR DK GI+H GK DF D L N + V +++ KP AKG+Y K + ++MG + ++ Sbjct: 92 AELVGMDDLADQIKKGEMNFDVVIASPDAMRVVGQLGQILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDSDKLKENLESLVVALKKAKPATAKGIYIKKISLSTTMGAGVAID 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_YERPA (50S ribosomal protein L1 OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=rplA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.016e-31 Identity = 68/134 (50.75%), Postives = 89/134 (66.42%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 A+LVG DDL +QIK G M FD +IASPD M V LG+ILGPRGLMPNPK GTVT N+ +A++ K G+V YR DK GI+H GK DF D L N + V +++ KP AKG+Y K + ++MG + ++ Sbjct: 92 AELVGMDDLADQIKKGEMNFDVVIASPDAMRVVGQLGQILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDSDKLKENLESLVVALKKAKPATAKGIYIKKISLSTTMGAGVAID 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_YERP3 (50S ribosomal protein L1 OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=rplA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.016e-31 Identity = 68/134 (50.75%), Postives = 89/134 (66.42%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 A+LVG DDL +QIK G M FD +IASPD M V LG+ILGPRGLMPNPK GTVT N+ +A++ K G+V YR DK GI+H GK DF D L N + V +++ KP AKG+Y K + ++MG + ++ Sbjct: 92 AELVGMDDLADQIKKGEMNFDVVIASPDAMRVVGQLGQILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDSDKLKENLESLVVALKKAKPATAKGIYIKKISLSTTMGAGVAID 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_THELT (50S ribosomal protein L1 OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=rplA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.016e-31 Identity = 67/139 (48.20%), Postives = 94/139 (67.63%), Query Frame = -1 Query: 352 ADLVGGDDLIEQIKG-GFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 765 AD VGGD+L+E+I F +FD IA+PDMM + LGKILGPRGLMP+PK+GTVT ++ A++ FK G++E R DKTG +HIP GK F + L N L+A + I A +P G KG + K + S+MG I+++ ++ Sbjct: 92 ADYVGGDELVEKITNENFTDFDVAIATPDMMRSIGKLGKILGPRGLMPSPKSGTVTEDVETAVKAFKMGRIEVRNDKTGCIHIPVGKCSFDGEKLRENLLSAYRQIIALRPAGVKGQFIKRVVLSSTMGVGIKIDQSDL 230
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_SODGM (50S ribosomal protein L1 OS=Sodalis glossinidius (strain morsitans) GN=rplA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.016e-31 Identity = 69/134 (51.49%), Postives = 88/134 (65.67%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 ADLVG DDL +QIK G FD +IASPD M V LG+ILGPRGLMPNPK GTVT N+ +A++ K G+V YR DK GI+H GK DF D L N A + +++ KP AKGVY K + ++MG + ++ Sbjct: 92 ADLVGMDDLADQIKKGEFNFDVVIASPDAMRVVGQLGQILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFESDKLKENLEALLVALKKAKPTQAKGVYIKKVSLSTTMGAGVAVD 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_RHIEC (50S ribosomal protein L1 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=rplA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.016e-31 Identity = 67/135 (49.63%), Postives = 90/135 (66.67%), Query Frame = -1 Query: 361 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNI 765 AD+VG +DL+E ++GG +EFD+ IA+PDMM V LGK+LGPRG+MPNPK GTVT ++ A++ K G VE+R +K GIVH GKA F L N A ++ KP GAKG Y K I S+MGP +++ + Sbjct: 90 ADVVGAEDLVEIVQGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPKVGTVTMDVAGAVKASKGGAVEFRVEKAGIVHAGIGKASFDAKALEENIRAFADAVIKAKPAGAKGNYVKRVAISSTMGPGVKIEV 224
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_RHIE6 (50S ribosomal protein L1 OS=Rhizobium etli (strain CIAT 652) GN=rplA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.016e-31 Identity = 67/135 (49.63%), Postives = 90/135 (66.67%), Query Frame = -1 Query: 361 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNI 765 AD+VG +DL+E ++GG +EFD+ IA+PDMM V LGK+LGPRG+MPNPK GTVT ++ A++ K G VE+R +K GIVH GKA F L N A ++ KP GAKG Y K I S+MGP +++ + Sbjct: 90 ADVVGAEDLVEIVQGGKIEFDRCIATPDMMPLVGRLGKVLGPRGMMPNPKVGTVTMDVAGAVKASKGGAVEFRVEKAGIVHAGIGKASFDAKALEENIRAFADAVIKAKPAGAKGNYVKRVAISSTMGPGVKIEV 224
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_PROMH (50S ribosomal protein L1 OS=Proteus mirabilis (strain HI4320) GN=rplA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.016e-31 Identity = 67/134 (50.00%), Postives = 90/134 (67.16%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 A+LVG DDL ++K G M+FD +IASPD M V LG+ILGPRGLMPNPK GTVT N+ +A++ K G+V YR DK GI+H GK DF+E L N A + +++ KP AKGVY K + ++MG + ++ Sbjct: 92 AELVGMDDLAAKVKAGEMDFDVVIASPDAMRVVGQLGQILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFNEAQLKENLEALLVALKKAKPSSAKGVYIKKVSLSTTMGAGVAID 225 The following BLAST results are available for this feature:
BLAST of CN188884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188884 ID=CN188884; Name=CN188884; organism=Citrus sinensis; type=EST; length=765bpback to top |