CN188884
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_FRAP2 (50S ribosomal protein L1 OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=rplA PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.041e-31 Identity = 63/138 (45.65%), Postives = 92/138 (66.67%), Query Frame = -1 Query: 352 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 765 AD+VG +DL +++K G M+FD +IASPD M V LG+ILGP+GLMPNPK GTVT ++ +A+ + K G+V YR DK GI+H GK +F+ D L N + ++ KP +KG+Y K + S+MGP I ++ ++ Sbjct: 92 ADVVGMEDLADEVKKGNMDFDVVIASPDSMRVVGQLGQILGPKGLMPNPKVGTVTMDVAKAVRDAKAGQVRYRVDKAGIIHTTIGKVNFTSDALKQNLEQLLTDLKKAKPSVSKGIYLKKVSVSSTMGPGISVDFSDL 229
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_BARBK (50S ribosomal protein L1 OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=rplA PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.041e-31 Identity = 66/135 (48.89%), Postives = 89/135 (65.93%), Query Frame = -1 Query: 361 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNI 765 AD+VG +DL E + GG + FD+ IA+PDMM V LGK+LGPR LMPNPK GTVTT+I A++ K G VE+R +K GIVH GKA F + L+ N V ++ KP+GAK Y K + S+MG I++++ Sbjct: 92 ADIVGAEDLFETVNGGTINFDRCIATPDMMPLVGRLGKVLGPRSLMPNPKVGTVTTDIAGAVKASKGGAVEFRVEKAGIVHAGVGKASFGAEQLIENIKTFVSAVIKAKPQGAKSEYIKRVAVSSTMGIGIKVDL 226
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_BACFR (50S ribosomal protein L1 OS=Bacteroides fragilis GN=rplA PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.041e-31 Identity = 61/138 (44.20%), Postives = 94/138 (68.12%), Query Frame = -1 Query: 352 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 765 AD VG D+ IE+IKGG+ + D +I P +M K+ +LG++LGPRGLMPNPK+GTVT ++ +A+ E K+GK++++ DK+GIVH GK F+ + + N + ++ KP AKG Y KS Y+ S+M I+++ K + Sbjct: 92 ADYVGLDEYIEKIKGGWTDIDVIITMPSIMGKIGALGRVLGPRGLMPNPKSGTVTMDVAKAVREVKQGKIDFKVDKSGIVHTSIGKVSFTAEQIRDNAKEFISTLNKLKPTAAKGTYIKSIYLSSTMSAGIKIDPKSV 229
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_BACFN (50S ribosomal protein L1 OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=rplA PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.041e-31 Identity = 61/138 (44.20%), Postives = 94/138 (68.12%), Query Frame = -1 Query: 352 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 765 AD VG D+ IE+IKGG+ + D +I P +M K+ +LG++LGPRGLMPNPK+GTVT ++ +A+ E K+GK++++ DK+GIVH GK F+ + + N + ++ KP AKG Y KS Y+ S+M I+++ K + Sbjct: 92 ADYVGLDEYIEKIKGGWTDIDVIITMPSIMGKIGALGRVLGPRGLMPNPKSGTVTMDVAKAVREVKQGKIDFKVDKSGIVHTSIGKVSFTAEQIRDNAKEFISTLNKLKPTAAKGTYIKSIYLSSTMSAGIKIDPKSV 229
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_YERE8 (50S ribosomal protein L1 OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=rplA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.583e-31 Identity = 67/134 (50.00%), Postives = 89/134 (66.42%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 A+LVG +DL +QIK G M FD +IASPD M V LG+ILGPRGLMPNPK GTVT N+ +A++ K G+V YR DK GI+H GK DF + L N + V +++ KP AKGVY K + ++MG + ++ Sbjct: 92 AELVGMEDLADQIKKGEMNFDVVIASPDAMRVVGQLGQILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDSEKLKENLESLVVALKRAKPATAKGVYIKKISLSTTMGAGVAID 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_VIBPA (50S ribosomal protein L1 OS=Vibrio parahaemolyticus GN=rplA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.583e-31 Identity = 65/134 (48.51%), Postives = 89/134 (66.42%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 AD+VG +DL EQ+K G M FD ++ASPD M V LG ILGPRGLMPNPK GTVT N+ +A++ K G+V YR DK GI+H GKA+FS + + N A + +++ KP AKG + K I ++MG + ++ Sbjct: 92 ADIVGMEDLAEQVKKGEMNFDVVVASPDAMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKANFSAEQIKENLEALLVALKKAKPSSAKGTFLKKVSISTTMGAGVAVD 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_VIBHB (50S ribosomal protein L1 OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=rplA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.583e-31 Identity = 65/134 (48.51%), Postives = 89/134 (66.42%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 AD+VG +DL EQ+K G M FD ++ASPD M V LG ILGPRGLMPNPK GTVT N+ +A++ K G+V YR DK GI+H GKA+FS + + N A + +++ KP AKG + K I ++MG + ++ Sbjct: 92 ADIVGMEDLAEQVKKGEMNFDVVVASPDAMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKANFSAEQIKENLEALLVALKKAKPSSAKGTFLKKVSISTTMGAGVAVD 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_STRAW (50S ribosomal protein L1 OS=Streptomyces avermitilis GN=rplA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.583e-31 Identity = 63/134 (47.01%), Postives = 92/134 (68.66%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 AD+VG D+LI+++ G ++FD ++A+PD+M KV LG++LGPRGLMPNPK GTVT ++ +A+ E K GK+E+R DK +H GK F + L+ N+ AA+ I KP AKG Y K A I +++GP I ++ Sbjct: 92 ADIVGSDELIDEVSKGRLDFDAVVATPDLMGKVGRLGRVLGPRGLMPNPKTGTVTPDVVKAVNEIKGGKIEFRVDKHSNLHFIIGKTSFDDTQLVENYGAALDEILRLKPSAAKGRYIKKAAISTTIGPGIPID 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_SHEB9 (50S ribosomal protein L1 OS=Shewanella baltica (strain OS195) GN=rplA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.583e-31 Identity = 68/134 (50.75%), Postives = 89/134 (66.42%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 A+LVG DDL E+IK G M FD +IASPD M V LG+ILGPRGLMPNPK GTVT N+ +A++ K G+V YR DK GI+H GK DF+ L N A V +++ KP AKG++ K I ++MG + ++ Sbjct: 92 AELVGMDDLAEKIKAGEMNFDVVIASPDAMRVVGMLGQILGPRGLMPNPKTGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFTPVQLKENLEALVSALKKAKPAVAKGIFVKKISISTTMGAGVAVD 225
BLAST of CN188884 vs. ExPASy Swiss-Prot
Match: RL1_SHEB8 (50S ribosomal protein L1 OS=Shewanella baltica (strain OS185) GN=rplA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.583e-31 Identity = 68/134 (50.75%), Postives = 89/134 (66.42%), Query Frame = -1 Query: 364 ADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 765 A+LVG DDL E+IK G M FD +IASPD M V LG+ILGPRGLMPNPK GTVT N+ +A++ K G+V YR DK GI+H GK DF+ L N A V +++ KP AKG++ K I ++MG + ++ Sbjct: 92 AELVGMDDLAEKIKAGEMNFDVVIASPDAMRVVGMLGQILGPRGLMPNPKTGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFTPVQLKENLEALVSALKKAKPAVAKGIFVKKISISTTMGAGVAVD 225 The following BLAST results are available for this feature:
BLAST of CN188884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188884 ID=CN188884; Name=CN188884; organism=Citrus sinensis; type=EST; length=765bpback to top |