CN188882

Overview
NameCN188882
Unique NameCN188882
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188882 vs. ExPASy Swiss-Prot
Match: ACBP1_ARATH (Acyl-CoA-binding domain-containing protein 1 OS=Arabidopsis thaliana GN=ACBP1 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.996e-11
Identity = 38/115 (33.04%), Postives = 61/115 (53.04%), Query Frame = -1
Query:  378 EEVGNEDE-SIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGVAVTLQNMDGKTPIDVAK 719
            EE  NE +   +H  A  G+ E L   +  G   +  DSEGRT LH+A   G +  A+ L++  A+V+A D    T+LHYA    R+     L++     T+++ DG +P+D+ +
Sbjct:  211 EESDNELKIDAIHAFAREGEVENLLKCIENGIPVNARDSEGRTPLHWAIDRGHLNVAEALVDKNADVNAKDNEGQTSLHYAVVCEREALAEFLVKQKADTTIKDEDGNSPLDLCE 325          
BLAST of CN188882 vs. ExPASy Swiss-Prot
Match: ACBP2_ARATH (Acyl-CoA-binding domain-containing protein 2 OS=Arabidopsis thaliana GN=ACBP2 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11
Identity = 37/115 (32.17%), Postives = 61/115 (53.04%), Query Frame = -1
Query:  378 EEVGNEDE-SIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGVAVTLQNMDGKTPIDVAK 719
            EE  NE +   +H  A  G+ E L  ++ +G   +  DSEGRT LH+A   G +  A++L++  A+V+A D    T LHYA    R+     L++       ++ DG +P+D+ +
Sbjct:  226 EESENELKIDAIHGFAREGEVENLLKSIESGIPVNARDSEGRTPLHWAIDRGHLNIAKVLVDKNADVNAKDNEGQTPLHYAVVCDREAIAEFLVKQNANTAAKDEDGNSPLDLCE 340          
BLAST of CN188882 vs. ExPASy Swiss-Prot
Match: Y045_METMA (Putative ankyrin repeat protein MM_0045 OS=Methanosarcina mazei GN=MM_0045 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11
Identity = 37/101 (36.63%), Postives = 61/101 (60.40%), Query Frame = -1
Query:  339 LAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGVAVTLQNMDGKTPIDVAKLNSQHDVLKLLEK 641
            + AGAD + +D+ G+TAL  A   G     ++L+ AGA+++  DKN NTAL YAA  G ++ V LL+E G ++ + +  G T +  +    + D+++LL K
Sbjct:  220 IKAGADLNIQDNSGKTALVAATKIGHKGIVELLVNAGADLNLQDKNGNTALIYAADRGYRDIVNLLIEGGASLNIPDEAGLTALMFSAQTGRKDIVELLIK 320          
BLAST of CN188882 vs. ExPASy Swiss-Prot
Match: RAI14_RAT (Ankycorbin OS=Rattus norvegicus GN=Rai14 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11
Identity = 39/121 (32.23%), Postives = 62/121 (51.24%), Query Frame = -1
Query:  345 NEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGVAVTLQNMDGKTPIDVAKLNSQHDVLKLL 707
            +E ++  H  A+ G  E LK  +  G D   +DS G +ALH A   G  +  + LL+  +  +++D    TALHYAA  G  + V +L E+   + L+++DG  P+ VA  N   +    L
Sbjct:   51 SEGKTAFHLAAAKGHVECLKVMVTHGVDVTAQDSSGHSALHIAAKNGHPEYIKKLLQYKSPAESVDNLGKTALHYAAAQGSLQAVQVLCEHKSPINLKDLDGNIPLLVAIQNGHSEACHFL 171          
BLAST of CN188882 vs. ExPASy Swiss-Prot
Match: CTTB2_NEONE (Cortactin-binding protein 2 OS=Neofelis nebulosa GN=CTTNBP2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11
Identity = 40/120 (33.33%), Postives = 59/120 (49.17%), Query Frame = -1
Query:  345 EDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGVAVTLQNMDGKTPIDVAKLNSQHDVLKLL 704
            +  S ++  A  G  + ++  L AGA  +  D+ G T L  A   G  KC ++L+   AN++       T L+ A   G KEC+ LLLE G   +++  DG TP+  A      D LKLL
Sbjct:  740 DGHSALYSAAKNGHTDCVRLLLNAGAQVNAADTNGFTPLCAAAAQGHFKCVELLISYDANINHAADEGQTPLYLACKNGNKECIQLLLEAGTDRSVKTRDGWTPVHAAVDTGNVDSLKLL 859          
BLAST of CN188882 vs. ExPASy Swiss-Prot
Match: ANR52_HUMAN (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C OS=Homo sapiens GN=ANKRD52 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11
Identity = 41/110 (37.27%), Postives = 61/110 (55.45%), Query Frame = -1
Query:  366 IVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAA-GYGRKECVALLLENGVAVTLQNMDGKTPIDVAKLNSQ 692
            ++H  A+ G  E +K  L  GA+ DE ++ G TALH AC  G+   A  L+ AGANV+  +    T LH AA       C+ LL+ NG  V  Q  +GK+P+ +A ++ +
Sbjct:  209 LLHTAAASGQIEVVKYLLRMGAEIDEPNAFGNTALHIACYLGQDAVAIELVNAGANVNQPNDKGFTPLHVAAVSTNGALCLELLVNNGADVNYQVPEGKSPLHMAAIHGR 318          
BLAST of CN188882 vs. ExPASy Swiss-Prot
Match: ANR24_MOUSE (Ankyrin repeat domain-containing protein 24 OS=Mus musculus GN=Ankrd24 PE=2 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11
Identity = 45/120 (37.50%), Postives = 58/120 (48.33%), Query Frame = -1
Query:  345 EDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGVAVTLQNMDGKTPIDVAKLNSQHDVLKLL 704
            E +S  H  A  G A  L+  LA GAD    D  G  ALH A  YG  +C + LLEA   VD  D +  TALH+AA  G   C  LL      +  ++  G TP+ +A      D+ +LL
Sbjct:   52 EGKSAFHLAAMRGAAGCLEVMLAQGADVMSTDGAGYNALHLAAKYGHPECLKQLLEASCVVDIEDSSGWTALHHAAAGGCLSCSKLLCSFKAHMNPRDRSGATPLIIAAQMCHTDLCRLL 171          
BLAST of CN188882 vs. ExPASy Swiss-Prot
Match: AKD1A_HUMAN (Ankyrin repeat and death domain-containing protein 1A OS=Homo sapiens GN=ANKDD1A PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11
Identity = 38/120 (31.67%), Postives = 65/120 (54.17%), Query Frame = -1
Query:  345 EDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGVAVTLQNMDGKTPIDVAKLNSQHDVLKLL 704
            E  + +H  A  G    L+  +  G D +E+++EG TALH A G     C Q+LL AG+ V+AL +   + LHYAA  G ++   +L+  G    + +  G +P+ +A  ++   +++LL
Sbjct:  191 EGNTALHLAAGRGHMAVLQRLVDIGLDLEEQNAEGLTALHSAAGGSHPDCVQLLLRAGSTVNALTQKNLSCLHYAALSGSEDVSRVLIHAGGCANVVDHQGASPLHLAVRHNFPALVRLL 310          

HSP 2 Score: 67.3958 bits (163), Expect = 8.902e-11
Identity = 38/114 (33.33%), Postives = 56/114 (49.12%), Query Frame = -1
Query:  345 HHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGVAVTLQNMDGKTPIDVAKLNSQHDVLKLL 686
            H  A  G  + L   + +G D + +D EG TALH A G G +   Q L++ G +++  +    TALH AAG    +CV LLL  G  V        + +  A L+   DV ++L
Sbjct:  164 HRAAEHGQLDALDFLVGSGCDHNVKDKEGNTALHLAAGRGHMAVLQRLVDIGLDLEEQNAEGLTALHSAAGGSHPDCVQLLLRAGSTVNALTQKNLSCLHYAALSGSEDVSRVL 277          
BLAST of CN188882 vs. ExPASy Swiss-Prot
Match: CTTB2_FELCA (Cortactin-binding protein 2 OS=Felis catus GN=CTTNBP2 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11
Identity = 40/120 (33.33%), Postives = 59/120 (49.17%), Query Frame = -1
Query:  345 EDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGVAVTLQNMDGKTPIDVAKLNSQHDVLKLL 704
            +  S ++  A  G  + ++  L AGA  +  D+ G T L  A   G  KC ++L+   AN++       T L+ A   G KEC+ LLLE G   +++  DG TP+  A      D LKLL
Sbjct:  740 DGHSALYSAAKNGHTDCVRLLLNAGAQVNAADTNGFTPLCAAAAQGHFKCVELLISYDANINHAADEGQTPLYLACKNGSKECIQLLLEAGTDRSVKTRDGWTPVHAAVDTGNVDSLKLL 859          
BLAST of CN188882 vs. ExPASy Swiss-Prot
Match: ANR46_RAT (Ankyrin repeat domain-containing protein 46 OS=Rattus norvegicus GN=Ankrd46 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11
Identity = 42/110 (38.18%), Postives = 57/110 (51.82%), Query Frame = -1
Query:  342 GDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGVAVTLQNMDGKTPIDVAKLNS-QHDVLKLLE 668
            GD    K  L +G D +  DS GRT LH A   G V   Q+L + GA+  A D   NTALH     G  + +  L+ NG+ + + N  G TP+ +AK      DV++LLE
Sbjct:   23 GDFTYSKRLLESGFDPNIRDSRGRTGLHLAAARGNVDICQLLHKFGADPLATDYQGNTALHLC---GHVDTIQFLVSNGLKIDICNHQGATPLVLAKRRGVNKDVIRLLE 129          
The following BLAST results are available for this feature:
BLAST of CN188882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
ACBP1_ARATH3.996e-1133.04Acyl-CoA-binding domain-containing protein 1 OS=Ar... [more]
ACBP2_ARATH5.219e-1132.17Acyl-CoA-binding domain-containing protein 2 OS=Ar... [more]
Y045_METMA6.816e-1136.63Putative ankyrin repeat protein MM_0045 OS=Methano... [more]
RAI14_RAT6.816e-1132.23Ankycorbin OS=Rattus norvegicus GN=Rai14 PE=2 SV=2[more]
CTTB2_NEONE6.816e-1133.33Cortactin-binding protein 2 OS=Neofelis nebulosa G... [more]
ANR52_HUMAN6.816e-1137.27Serine/threonine-protein phosphatase 6 regulatory ... [more]
ANR24_MOUSE6.816e-1137.50Ankyrin repeat domain-containing protein 24 OS=Mus... [more]
AKD1A_HUMAN6.816e-1131.67Ankyrin repeat and death domain-containing protein... [more]
CTTB2_FELCA8.902e-1133.33Cortactin-binding protein 2 OS=Felis catus GN=CTTN... [more]
ANR46_RAT8.902e-1138.18Ankyrin repeat domain-containing protein 46 OS=Rat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006P08_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006P08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188882 ID=CN188882; Name=CN188882; organism=Citrus sinensis; type=EST; length=725bp
TTTTTTTTTTTTTTTTTAAAAATTGCATATTTGACATAATGAAGCCCTTT
TTTGTAAAAGGACACAAATGTATCATAACGTGTAATTCACTAAACTAAGA
CATTAACATTCCCCACAGATAACTCATTCTGGGGAAGAGATTGTTTATGA
TATAAAATTTTAATGGTAGCAATCAGACAGTAACAAACAGAGCATTGACA
AAAGCATCAAGTCGTGATGACAACCTAATGCCTAACCGGAGTAGATTCAT
CCAACACACTGAAATGCCTATAAAATTGCCGAAATCCACCATTCAGATGC
TGACTTCCCAACAATCCTATATTTTACAGGAAAGCATCCTTCTCCAAAAG
CTTTAGCACATCATGTTGGCTATTGAGCTTGGCAACATCTATGGGAGTCT
TGCCATCCATGTTCTGCAGAGTTACAGCAACACCGTTCTCCAACAGAAGG
GCTACACATTCCTTCCTGCCATATCCGGCTGCATAATGTAGGGCAGTGTT
CTTGTTCTTATCCAAGGCATCCACATTTGCTCCGGCCTCAAGTAGGATTT
GAGCACACTTCACCTCACCATATCCGCAGGCAAAATGCAATGCTGTCCTT
CCTTCTGAATCTTCCTCATCTTTATCAGCACCAGCTGCCAATGCATTTTT
CAAACCCTCAGCATCACCAACACTGGCAGTGTGATGAACAATTGACTCAT
CCTCATTTCCCACTTCTTCTGCTTC
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