CN188880

Overview
NameCN188880
Unique NameCN188880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length724
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188880 vs. ExPASy Swiss-Prot
Match: CP52F_CANTR (Cytochrome P450 52A6 OS=Candida tropicalis GN=CYP52A6 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.097e-20
Identity = 50/142 (35.21%), Postives = 76/142 (53.52%), Query Frame = -3
Query:  303 GKMKESSSNSLVFKPEEIKKMDYLQAALSEALRLYPSVPVDHKEVVEDDVFPDGTA--------VKKGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRYTSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRY 704
            G  +ES    + F  E +K+ +YL+A L+E LR+YPSVPV+ +    D   P G          + KG+ V Y +Y   R+E  +GKD  +F+PERW      T +  + +  FNGGPR+CLG+ FA  +  Y    ++  +
Sbjct:  356 GVGEESRVEEITF--ESLKRCEYLKAILNETLRMYPSVPVNSRTATRDTTLPRGGGPNGTDPIFIPKGSTVAYIVYKTHRLEEYYGKDADDFRPERWFEPS--TKKLGWAYVPFNGGPRICLGQQFALTEASYVITRLVQMF 493          
BLAST of CN188880 vs. ExPASy Swiss-Prot
Match: CP52B_CANTR (Cytochrome P450 52A2 OS=Candida tropicalis GN=CYP52A2 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.102e-20
Identity = 55/158 (34.81%), Postives = 83/158 (52.53%), Query Frame = -3
Query:  219 EEIKKMDYLQAALSEALRLYPSVPVDHKEVVEDDVFPDG--------TAVKKGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRYTSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRY-RVKVVKGHPVSPKLA--LTMYMKHGLKVNL 659
            E +K  +YL+A L+E LRLYPSVP + +    +   P G          V+KG  V+Y++YA  R + I+G+D  EF+PERW      T +  + F  FNGGPR+CLG+ FA  +  Y    ++  +  + +      SPK    LTM +  G  + +
Sbjct:  366 ESLKSCEYLKAVLNECLRLYPSVPQNFRVATRNTTLPRGGGKDGLSPVLVRKGQTVMYSVYAAHRNKQIYGEDALEFRPERWFEP--ETKKLGWAFLPFNGGPRICLGQQFALTEASYVTVRLLQEFSHLTMDPNTEYSPKKMSHLTMSLFDGANIQM 521          
BLAST of CN188880 vs. ExPASy Swiss-Prot
Match: CP52J_CANMA (Cytochrome P450 52A10 OS=Candida maltosa GN=CYP52A10 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.969e-20
Identity = 56/156 (35.90%), Postives = 82/156 (52.56%), Query Frame = -3
Query:  225 EEIKKMDYLQAALSEALRLYPSVPVDHKEVVEDDVFPDGTA--------VKKGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRYTSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRYRVKVVK---GHPVSPKLALTMYMKHGLKV 659
            E +K  +YL+A L+E LRLYPSVP + +   ++   P G          V+KG  V+Y++YA+ R E  +GKD  EF+PERW        +  + F  FNGGPR+CLG+ FA  +  Y  A +I  +    +     +P +    LTM +  G  V
Sbjct:  363 ELLKLCEYLKAVLNETLRLYPSVPRNARFAAKNTTLPHGGGPDGMSPILVRKGQTVMYSVYALQRDEKYYGKDANEFRPERWFEP--EVRKLGWAFLPFNGGPRICLGQQFALTEASYVLARLIQSFETLELSPEAAYPPAKLSHLTMCLFDGTPV 516          
BLAST of CN188880 vs. ExPASy Swiss-Prot
Match: CP52D_CANMA (Cytochrome P450 52A4 OS=Candida maltosa GN=CYP52A4 PE=1 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 3.955e-19
Identity = 58/184 (31.52%), Postives = 93/184 (50.54%), Query Frame = -3
Query:  186 REDGKMKESSSNSLVFKPEEIKKMDYLQAALSEALRLYPSVPVDHKEVVEDDVFPDG--------TAVKKGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRYTSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRYRVKVVKGHPVSPKLALTMYMKHGLKVNLCKRDESELQKY 713
            +ED +++E +  SL       K  +YL+A ++EALR+YPSVP + +    +   P G         A+KKG  V+Y I A  R  +I+G+D   F+PERW      T +  + +  FNGGPR+CLG+ FA  +  Y    ++  +       +   P       +++ L V+LC  D + +Q Y
Sbjct:  371 KEDARVEEITFESL-------KLCEYLKACVNEALRVYPSVPHNFRVATRNTTLPRGGGKDGMSPIAIKKGQNVMYTISATHRDPSIYGEDANVFRPERWFEP--ETRKLGWAYVPFNGGPRICLGQQFALTEASYVTVRLLQEFHTLTQDANTRYPP-----RLQNSLTVSLC--DGANIQMY 538          
BLAST of CN188880 vs. ExPASy Swiss-Prot
Match: CP52K_CANMA (Cytochrome P450 52A11 OS=Candida maltosa GN=CYP52A11 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.166e-19
Identity = 54/158 (34.18%), Postives = 81/158 (51.27%), Query Frame = -3
Query:  219 EEIKKMDYLQAALSEALRLYPSVPVDHKEVVEDDVFPDGTA--------VKKGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRYTSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRYRVKVVK---GHPVSPKLALTMYMKHGLKVNL 659
            E +K  +YL+A ++E LRLYPSVP + +    +   P G          V+KG  V+Y++YA+ R E  +GKD  EF+PERW        +  + F  FNGGPR+CLG+ FA  +  Y    +I  +    +     +P +    LTM +  G  V +
Sbjct:  363 ELLKLCEYLKAVINETLRLYPSVPRNGRFAAANTTLPHGGGPDGMSPILVRKGQTVMYSVYALQRDEKYYGKDANEFRPERWFEP--EVRKLGWAFLPFNGGPRICLGQQFALTEASYVLVRLIQSFETLELSPDAPYPPAKLTHLTMCLFDGAPVRI 518          
BLAST of CN188880 vs. ExPASy Swiss-Prot
Match: CP52V_CANAP (Cytochrome P450 52E1 OS=Candida apicola GN=CYP52E1 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.503e-18
Identity = 49/149 (32.89%), Postives = 79/149 (53.02%), Query Frame = -3
Query:  240 EEIKKMDYLQAALSEALRLYPSVPVDHKEVVEDDVFPDGTA--------VKKGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRYTSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRY-RVKVVKGHPVSPKLALTMYMK 659
            E++K+   LQ  + E LRL+P+VP++ ++ + D   P G          V KG  V Y+ Y+M R   IWG D   F+P+RW  + R    S + +  FNGGPR+CLG+ FA  +  Y    I   + R++V+    ++ K ++   M+
Sbjct:  357 EQLKQCKVLQNVIREVLRLHPNVPLNFRQAIVDTKLPTGGGPNGDQPVFVPKGQNVFYSTYSMQRRTDIWGPDATTFRPDRW-NEPREALASGWDYIPFNGGPRICLGQQFALTEASYTIVRICQEFSRIEVLHPDVITSKNSMKQRMR 504          
BLAST of CN188880 vs. ExPASy Swiss-Prot
Match: CP52A_CANTR (Cytochrome P450 52A1 OS=Candida tropicalis GN=CYP52A1 PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 53/158 (33.54%), Postives = 82/158 (51.90%), Query Frame = -3
Query:  219 EEIKKMDYLQAALSEALRLYPSVPVDHKEVVEDDVFPDG--------TAVKKGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRYTSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRY-RVKVVKGHPVSPKL--ALTMYMKHGLKVNL 659
            E +K  +YL+A ++E LR+YPSVP + +    +   P G         A+KKG  V+Y I A  R + I+G+D   F+PERW      T +  + +  FNGGPR+CLG+ FA  +  Y    ++  +  +K        PKL   LT+ +  G +V +
Sbjct:  384 ETLKSCEYLKAVINETLRIYPSVPHNFRVATRNTTLPRGGGEGGLSPIAIKKGQVVMYTILATHRDKDIYGEDAYVFRPERWFEP--ETRKLGWAYVPFNGGPRICLGQQFALTEASYVTVRLLQEFGNLKQDPNTEYPPKLQNTLTLSLFEGAEVQM 539          
BLAST of CN188880 vs. ExPASy Swiss-Prot
Match: CP52I_CANMA (Cytochrome P450 52A9 OS=Candida maltosa GN=CYP52A9 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.981e-16
Identity = 50/159 (31.45%), Postives = 79/159 (49.69%), Query Frame = -3
Query:  222 EEIKKMDYLQAALSEALRLYPSVPVDHKEVVEDDVFPDGTA--------VKKGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRYTSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRYRVKVVKGHPVSP-----KLALTMYMKHGLKVN 659
            E +K+ +YL+A ++E LR+YPSVP + +   +    P G          +KKG  V Y I +       +G D R F P+RW +    T +  + F  FNGGPR+CLG+ FA  +  Y    +I  ++   +  + V P      L +++Y    +KVN
Sbjct:  365 ESLKQCEYLKAVVNECLRMYPSVPRNFRIATKHTTLPRGGGPDGKDPIFIKKGAVVSYGINSTHLDPMYYGPDARLFNPDRWSKPE--TKKLGWAFLPFNGGPRICLGQQFALTEASYVLVRMIQNFKELELTPNTVYPPRRLTNLTMSLYDGAYIKVN 521          
BLAST of CN188880 vs. ExPASy Swiss-Prot
Match: CP52H_CANTR (Cytochrome P450 52A8 OS=Candida tropicalis GN=CYP52A8 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.118e-16
Identity = 53/163 (32.52%), Postives = 78/163 (47.85%), Query Frame = -3
Query:  252 EREDGKMKESSSNSLVFKPEEIKKMDYLQAALSEALRLYPSVPVDHKEVVEDDVFPDG--------TAVKKGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRYTSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRYRVKVVKGHPVSPKLALT 716
            E + G  ++S    + F  E +K+  YL+A L+E LR+YPSVP + +   ++   P G          VKKG  V Y I +       +G D  EF+PERW      T +  + +  FNGGPR+CLG+ FA  +  Y    +   +    +K   V P   LT
Sbjct:  344 ESQFGLGEQSRIEEITF--ESLKRCGYLKAFLNETLRVYPSVPRNFRIATKNTTLPRGGGSDGNSPVLVKKGEAVSYGINSTHLDPVYYGDDAAEFRPERWNEPS--TRKLGWAYLPFNGGPRICLGQQFALTEAGYVLVRLAQSFDTLELKPPVVYPPKRLT 502          
BLAST of CN188880 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.118e-16
Identity = 48/133 (36.09%), Postives = 68/133 (51.13%), Query Frame = -3
Query:  303 KMKESSSNSLVFKPEEIKKMDYLQAALSEALRLYPSVPVDHKEVVEDDVFPDGTAVKKGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRYTSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIYRY 701
            +++ SS   L    +E +KM+YLQA + EALRL P  P+    V+ +DV   G  +  GT+VI   +A+ R    WG D  EFKPER L          +KF  F  G R+C G  F    +    A+I+ R+
Sbjct:  329 EIRSSSPQDLFVTEKEAEKMNYLQAVIKEALRLRPPAPLLVPRVLSEDVKLKGYNIPAGTQVIVNAWAIQRDTTTWGTDAEEFKPERHLDTNLDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRF 461          
The following BLAST results are available for this feature:
BLAST of CN188880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
CP52F_CANTR2.097e-2035.21Cytochrome P450 52A6 OS=Candida tropicalis GN=CYP5... [more]
CP52B_CANTR6.102e-2034.81Cytochrome P450 52A2 OS=Candida tropicalis GN=CYP5... [more]
CP52J_CANMA7.969e-2035.90Cytochrome P450 52A10 OS=Candida maltosa GN=CYP52A... [more]
CP52D_CANMA3.955e-1931.52Cytochrome P450 52A4 OS=Candida maltosa GN=CYP52A4... [more]
CP52K_CANMA5.166e-1934.18Cytochrome P450 52A11 OS=Candida maltosa GN=CYP52A... [more]
CP52V_CANAP1.503e-1832.89Cytochrome P450 52E1 OS=Candida apicola GN=CYP52E1... [more]
CP52A_CANTR4.373e-1833.54Cytochrome P450 52A1 OS=Candida tropicalis GN=CYP5... [more]
CP52I_CANMA6.981e-1631.45Cytochrome P450 52A9 OS=Candida maltosa GN=CYP52A9... [more]
CP52H_CANTR9.118e-1632.52Cytochrome P450 52A8 OS=Candida tropicalis GN=CYP5... [more]
C71AK_ARATH9.118e-1636.09Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006P06_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006P06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188880 ID=CN188880; Name=CN188880; organism=Citrus sinensis; type=EST; length=724bp
TTTTTTTTTTTTTTTTTATTAAATACAACCCTTTATATTCCCATTTAAAT
TATGTTTCAATCAATTCCATGTATTTCTAACACATATATATTGCAATACC
AATAATAATAATATGGCTAAAAATTATGAAAAGCAAACATATTTTATTGA
CACAAAGTGAGCTCTCAATTTATCATTCACTTGAAGTATTTTTGCAGCTC
AGACTCATCTCGCTTGCATAGGTTCACCTTCAAGCCATGCTTCATGTACA
TTGTCAACGCAAGCTTTGGTGACACCGGATGACCCTTCACCACCTTAACA
CGGTAGCGGTAAATGATGGAGGCGGCAGCGTATTTCATCTGATAGTAGGC
GAAATCTTTGCCGAGGCAGAGCCTGGGGCCACCGTTGAAGGCAGTGAACT
TGTAGGCTGATTCACTCGTATAACGGCCGTCTCTTAGCCATCTTTCTGGC
TTGAATTCTCTACAATCCTTTCCCCATATTGCCTCCATTCTTCCCATTGC
ATAAATTGCATATATCACTTTTGTTCCCTTCTTTACAGCTGTCCCATCTG
GAAATACATCGTCTTCAACCACCTCTTTGTGATCAACAGGCACAGAGGGA
TACAACCTCAAAGCCTCTGATAATGCAGCTTGCAAATAATCCATTTTTTT
AATCTCCTCAGGCTTAAACACCAATGAATTACTGCTACTCTCCTTCATTT
TCCCGTCTTCTCTTTCAGCAATTA
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