CN182097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN182097 vs. ExPASy Swiss-Prot
Match: YPI1_VIBAL (UPF0001 protein in pilT-proC intergenic region OS=Vibrio alginolyticus PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.342e-35 Identity = 100/206 (48.54%), Postives = 123/206 (59.71%), Query Frame = -1 Query: 122 SKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----AAQLPDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTI--GMPDYTSTPENFKTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGSTNVRIGSTIFGAREY 718 SKTKPV I + Y+AG FGENYVQE V K A PD+ +EWHFIG +QSNK + + + V ++D KIA RLN KPL+VL+QVNTSGE SKSGV + EL + +S+ PNL GLM+I + DY S F+ LA + + PE LSMGMSGD AIE GST VRIG+ IFGAR+Y Sbjct: 35 SKTKPVEAILEAYQAGQTAFGENYVQEGVSKVQHFAEHYPDNRIEWHFIGPIQSNKSRLV---AEHFDWVHTIDRTKIAQRLNDQ-RPSELKPLQVLIQVNTSGEASKSGVTEAEVFELAELISR-LPNLTLRGLMSIPANVSDYESQLHEFQKLATLKQTL--EAQFPEIDT-LSMGMSGDMTAAIEAGSTMVRIGTAIFGARDY 232
BLAST of CN182097 vs. ExPASy Swiss-Prot
Match: YBD6_YEAST (UPF0001 protein YBL036C OS=Saccharomyces cerevisiae GN=YBL036C PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.318e-34 Identity = 96/211 (45.50%), Postives = 127/211 (60.19%), Query Frame = -1 Query: 110 SKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLVQVNTSGEESKSGV-EPSGCLELVK-HVSQNCPNLEFCGLMTIGM--PDYTSTPEN--FKTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGSTNVRIGSTIFGAREYPKKN 718 SK KP S I+ +Y+ G R FGENYVQE++EKA LPDD++WHFIG LQ+NK K LA VPNL VE++D+ K A +LN R P+ VQ+NTS E+ KSG+ + E++ +S+ C ++ GLMTIG + + EN F TL + + ++ G LSMGMS DF AI G+ VRIG+ IFGAR P KN Sbjct: 48 SKLKPASDIQILYDHGVREFGENYVQELIEKAKLLPDDIKWHFIGGLQTNKCKD-LAKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSHEDQKSGLNNEAEIFEVIDFFLSEECKYIKLNGLMTIGSWNVSHEDSKENRDFATLVEWKKKIDAKFG---TSLKLSMGMSADFREAIRQGTAEVRIGTDIFGAR--PPKN 252
BLAST of CN182097 vs. ExPASy Swiss-Prot
Match: Y274_AQUAE (UPF0001 protein aq_274 OS=Aquifex aeolicus GN=aq_274 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.774e-33 Identity = 88/204 (43.14%), Postives = 121/204 (59.31%), Query Frame = -1 Query: 122 SKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTSTPEN----FKTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGSTNVRIGSTIFGAREY 718 SKT P VIR+ Y G + +GEN VQE ++K L D DLEWHFIG LQ+NKVK L+ V ++ S+D + +A + + VL++VN GEE+K GVEP EL ++ + PN++ GLMTI P Y PE+ F+ L + R E+ + + LSMGMS DFE+AIE G+T VRIG+ +FG R+Y Sbjct: 34 SKTVPPEVIREFYNCGLKVYGENRVQEFLKKYEALKDLDLEWHFIGRLQTNKVKYLMGKV---VLIHSLDRKNLADEIQKRA-FKNNIVQDVLIEVNVGGEETKGGVEPENLKELFEYTLE-LPNVKVLGLMTI--PPYLENPEDVRPYFRKLRELRDELQREYNVALPH--LSMGMSHDFEVAIEEGATIVRIGTLLFGERKY 228
BLAST of CN182097 vs. ExPASy Swiss-Prot
Match: Y394_PSEAE (UPF0001 protein PA0394 OS=Pseudomonas aeruginosa GN=PA0394 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.006e-31 Identity = 91/201 (45.27%), Postives = 114/201 (56.72%), Query Frame = -1 Query: 122 SKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTSTPENFKTLAKCRSEVCKA-LGIPEEQCDLSMGMSGDFELAIEMGSTNVRIGSTIFGAREY 718 SKTKP + +R+ + AG R FGENY+QE + K A+L D L WHFIG +QSNK +P+ + V SVD KIA RL+ G PL V +QVN SGE SKSG P L + V Q PNL GLM I P ++ A+ R + LG+ LSMGMS D E AI G+T VRIG+ +FGAR+Y Sbjct: 35 SKTKPAAAVREAHAAGLRDFGENYLQEALGKQAELADLPLNWHFIGPIQSNKTRPI---AEHFQWVHSVDRLKIAQRLSEQ-RPAGLPPLNVCLQVNVSGEASKSGCAPEDLPALAEAVKQ-LPNLRLRGLMAIPEPTAERAAQH-AAFARLRELLLDLNLGLD----TLSMGMSDDLEAAIGEGATWVRIGTALFGARDY 225
BLAST of CN182097 vs. ExPASy Swiss-Prot
Match: YGGS_ECOLI (UPF0001 protein yggS OS=Escherichia coli (strain K12) GN=yggS PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.541e-28 Identity = 87/209 (41.63%), Postives = 110/209 (52.63%), Query Frame = -1 Query: 113 SKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTSTPENFKTLAKCRSEVCKALGIPEEQCD---LSMGMSGDFELAIEMGSTNVRIGSTIFGAREYPKK 718 SKTKP S I + +AG R FGENYVQE V+K + LEWHFIG LQSNK + + + ++D +IA RLN PL VL+Q+N S E SKSG++ + EL V++ P L GLM I P+ E + R G+ LS+GMS D E AI GST VRIG+ IFGAR+Y KK Sbjct: 35 SKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLV---AEHFDWCHTIDRLRIATRLNDQ-RPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAE-LPRLRLRGLMAIPAPE----SEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYSKK 234
BLAST of CN182097 vs. ExPASy Swiss-Prot
Match: YGGS_ECOL6 (UPF0001 protein yggS OS=Escherichia coli O6 GN=yggS PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.541e-28 Identity = 87/209 (41.63%), Postives = 110/209 (52.63%), Query Frame = -1 Query: 113 SKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTSTPENFKTLAKCRSEVCKALGIPEEQCD---LSMGMSGDFELAIEMGSTNVRIGSTIFGAREYPKK 718 SKTKP S I + +AG R FGENYVQE V+K + LEWHFIG LQSNK + + + ++D +IA RLN PL VL+Q+N S E SKSG++ + EL V++ P L GLM I P+ E + R G+ LS+GMS D E AI GST VRIG+ IFGAR+Y KK Sbjct: 35 SKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLV---AEHFDWCHTIDRLRIATRLNDQ-RPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAE-LPRLRLRGLMAIPAPE----SEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYSKK 234
BLAST of CN182097 vs. ExPASy Swiss-Prot
Match: YGGS_ECO57 (UPF0001 protein yggS OS=Escherichia coli O157:H7 GN=yggS PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.541e-28 Identity = 87/209 (41.63%), Postives = 110/209 (52.63%), Query Frame = -1 Query: 113 SKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTSTPENFKTLAKCRSEVCKALGIPEEQCD---LSMGMSGDFELAIEMGSTNVRIGSTIFGAREYPKK 718 SKTKP S I + +AG R FGENYVQE V+K + LEWHFIG LQSNK + + + ++D +IA RLN PL VL+Q+N S E SKSG++ + EL V++ P L GLM I P+ E + R G+ LS+GMS D E AI GST VRIG+ IFGAR+Y KK Sbjct: 35 SKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLV---AEHFDWCHTIDRLRIATRLNDQ-RPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAE-LPRLRLRGLMAIPAPE----SEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYSKK 234
BLAST of CN182097 vs. ExPASy Swiss-Prot
Match: Y395_HELPJ (UPF0001 protein jhp_0986 OS=Helicobacter pylori J99 GN=jhp_0986 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.113e-27 Identity = 80/197 (40.61%), Postives = 108/197 (54.82%), Query Frame = -1 Query: 137 SKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIG--MPDYTSTPENFKTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGSTNVRIGSTIF 718 SK I+ Y R FGEN VQ++ K L LEWH IG+LQ NK+ LL+ P A++ S+D+ K+A ++ + E +G L L+QVN++ EESKSGV P LE +S+ C L+ GLM IG D T ++F T K ++ A LSMGMS DFELAI G+ +RIGS +F Sbjct: 34 SKNASPEAIQHYYNCSQRAFGENKVQDLKIKMHSLEHLPLEWHMIGSLQENKINALLSLKP--ALLHSLDSLKLALKIEKRCEILGVN-LNALLQVNSAYEESKSGVVPEEALETYSQISETCKRLKLKGLMCIGAHTDDETKIEKSFTTTKKLFDQIKNA-------SVLSMGMSDDFELAIACGANLLRIGSFLF 220
BLAST of CN182097 vs. ExPASy Swiss-Prot
Match: Y395_HELPY (UPF0001 protein HP_0395 OS=Helicobacter pylori GN=HP_0395 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.721e-27 Identity = 79/197 (40.10%), Postives = 109/197 (55.33%), Query Frame = -1 Query: 137 SKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIG--MPDYTSTPENFKTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGSTNVRIGSTIF 718 SK I+ Y R FGEN VQ++ K L LEWH IG+LQ NK+ LL+ P A++ S+D+ K+A ++ + E +G L L+QVN++ EESKSGV P LE+ +S+ C +L+ GLM IG D ++F T K ++ A LSMGMS DFELAI G+ +RIGS +F Sbjct: 34 SKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKINALLSLKP--ALLHSLDSLKLALKIEKRCEILGVN-LNALLQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNA-------SVLSMGMSDDFELAIACGANLLRIGSFLF 220
BLAST of CN182097 vs. ExPASy Swiss-Prot
Match: Y556_SYNY3 (UPF0001 protein slr0556 OS=Synechocystis sp. (strain PCC 6803) GN=slr0556 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.447e-22 Identity = 77/209 (36.84%), Postives = 114/209 (54.55%), Query Frame = -1 Query: 128 SKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGC------LELVKHVSQNCPNLEFCGLMTIGMPDYTSTPENFKTLAKCRSEVCKALGIPEEQC----DLSMGMSGDFELAIEMGSTNVRIGSTIFGAR 718 +KTK ++ I Y AG R F E+ +QE + K L + D+ WHFIG LQSNK + + V N + SVDN IA +L+R+ E + + P + L+Q+ +E+KSG LEL+K NL+ CGLMTI +P S + T + ++ A I ++ +LSMGMSGD+ AI G+T +R+G+ +FG R Sbjct: 24 TKTKAIADIEAAYGAGIRDFAESRIQEALPKIEALANYQDINWHFIGRLQSNKARKV---VENFTYIHSVDNLAIAVKLDRIAEELNKFP-QGLLQIKLLPDENKSGWTREELKLDLPQLELLK-------NLKICGLMTI-LPLGLSPGDRQLTFGELKN---LATAINQQSSLSLTELSMGMSGDYPEAIAAGATMIRLGTILFGDR 217 The following BLAST results are available for this feature:
BLAST of CN182097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN182097 ID=CN182097; Name=CN182097; organism=Citrus sinensis; type=EST; length=718bpback to top |