CN182096

Overview
NameCN182096
Unique NameCN182096
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length729
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182096 vs. ExPASy Swiss-Prot
Match: PGIP1_PHAVU (Polygalacturonase inhibitor 1 OS=Phaseolus vulgaris GN=PGIP1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.262e-12
Identity = 40/107 (37.38%), Postives = 60/107 (56.07%), Query Frame = -1
Query:  400 GNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSL-KVVDVSSNDLCGTIP 717
            G +NL G + P + KL  L YL +   N+ G IP  L  +K+L++LD   N +SG +PPS++ L +L  +  + NR++G IP      S L   + +S N L G IP
Sbjct:  114 GINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLGGITFDGNRISGAIPDSYGSFSKLFTAMTISRNRLTGKIP 220          
BLAST of CN182096 vs. ExPASy Swiss-Prot
Match: Y5332_ARATH (Probable inactive receptor kinase At5g53320 OS=Arabidopsis thaliana GN=At5g53320 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.648e-12
Identity = 45/123 (36.59%), Postives = 70/123 (56.91%), Query Frame = -1
Query:  352 LGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENN 720
            L ++N+SG     L  L++L  L+L  N   G +P +L + + L  LDL NN  +G IP S+ KL  L  L L  N+ +G+IP   + I  LK+++++ N+L GT+P S   +  PL+ F  N
Sbjct:   97 LSSNNISGTFPTTLQALKNLTELKLDFNEFSGPLPSDLSSWERLQVLDLSNNRFNGSIPSSIGKLTLLHSLNLAYNKFSGEIPD--LHIPGLKLLNLAHNNLTGTVPQS--LQRFPLSAFVGN 215          
BLAST of CN182096 vs. ExPASy Swiss-Prot
Match: RPKL_ARATH (Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana GN=At4g34220 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.648e-12
Identity = 41/123 (33.33%), Postives = 68/123 (55.28%), Query Frame = -1
Query:  352 LGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENN 720
            L N +L G + P+L  + +L+ L+L  N   G++P  + N   L S+ L +NN+SG +P S+  + +L  L L+ N  TG+IP  +  + +L VV +S N   G IP+   FE   + +  +N
Sbjct:   86 LPNKHLLGSITPDLFSIPYLRILDLSSNFFNGSLPDSVFNATELQSISLGSNNLSGDLPKSVNSVTNLQLLNLSANAFTGEIPLNISLLKNLTVVSLSKNTFSGDIPSG--FEAAQILDLSSN 206          
BLAST of CN182096 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.648e-12
Identity = 41/105 (39.05%), Postives = 63/105 (60.00%), Query Frame = -1
Query:  397 SNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPT 711
            + LSG +  E G    L YL+L  N   GTIP ELGNL  L  L L +N ++G +P SLA+L+++   R+ND +L+G IP  +     L+ +++ ++ L G IP+
Sbjct:  156 NRLSGEIPKEFGN-SSLTYLDLESNAFSGTIPQELGNLVHLKKLLLSSNKLTGTLPASLARLQNMTDFRINDLQLSGTIPSYIQNWKQLERLEMIASGLTGPIPS 259          
BLAST of CN182096 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.152e-12
Identity = 41/99 (41.41%), Postives = 54/99 (54.55%), Query Frame = -1
Query:  352 LYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENN 648
            L  N + GTI  E+G LK L  LDL  NN +G IP S++ L +L  L L+ N L G IP     ++ L    V+ N L G IP+ G F   P ++FE N
Sbjct:  543 LNNNRLNGTILPEIGRLKELHMLDLSRNNFTGTIPDSISGLDNLEVLDLSYNHLYGSIPLSFQSLTFLSRFSVAYNRLTGAIPSGGQFYSFPHSSFEGN 641          

HSP 2 Score: 72.0182 bits (175), Expect = 3.671e-12
Identity = 41/109 (37.61%), Postives = 57/109 (52.29%), Query Frame = -1
Query:  394 LGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 720
            L  + LSG L   L  L  L+ L + +N     IP   GNL  L  LD+ +N  SG+ PPSL++   L  L L +N L+G I     G + L V+D++SN   G +P S
Sbjct:  239 LSGNYLSGELSKNLSNLSGLKSLLISENRFSDVIPDVFGNLTQLEHLDVSSNKFSGRFPPSLSQCSKLRVLDLRNNSLSGSINLNFTGFTDLCVLDLASNHFSGPLPDS 347          

HSP 3 Score: 67.781 bits (164), Expect = 6.923e-11
Identity = 36/83 (43.37%), Postives = 50/83 (60.24%), Query Frame = -1
Query:  472 LGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIP 720
            L N+ L+G ++PE+G+L+ L  L+L +NN  GTIP  +  L +L  LDL  N++ G IP S   L  L    +  NRLTG IP
Sbjct:  543 LNNNRLNGTILPEIGRLKELHMLDLSRNNFTGTIPDSISGLDNLEVLDLSYNHLYGSIPLSFQSLTFLSRFSVAYNRLTGAIP 625          
BLAST of CN182096 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.152e-12
Identity = 42/112 (37.50%), Postives = 65/112 (58.04%), Query Frame = -1
Query:  400 DLGNSNLSGRLVPEL-GKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKS---LVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 723
            +LGN+ LSG  +  +  K+  + YL +  NNI G++P+ L N  +L  LDL +N  +G +P     L+S   L  + + +N L+G +P EL    SLK +D+S N+L G IP
Sbjct:  332 NLGNNYLSGDFLNTVVSKITGITYLYVAYNNISGSVPISLTNCSNLRVLDLSSNGFTGNVPSGFCSLQSSPVLEKILIANNYLSGTVPMELGKCKSLKTIDLSFNELTGPIP 443          

HSP 2 Score: 70.8626 bits (172), Expect = 8.178e-12
Identity = 35/92 (38.04%), Postives = 53/92 (57.61%), Query Frame = -1
Query:  445 LGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSL 720
            L N+ L+G +   + +  ++ ++ L  N + G IP  +GNL  L  L L NN++SG +P  L   KSL++L LN N LTG +P EL   + L
Sbjct:  482 LNNNLLTGSIPESISRCTNMIWISLSSNRLTGKIPSGIGNLSKLAILQLGNNSLSGNVPRQLGNCKSLIWLDLNSNNLTGDLPGELASQAGL 573          

HSP 3 Score: 70.0922 bits (170), Expect = 1.395e-11
Identity = 44/133 (33.08%), Postives = 70/133 (52.63%), Query Frame = -1
Query:  400 DLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIP----VELGNLKSLIS---------------------LDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 723
            DL  + L+G +  E+  L +L  L ++ NN+ GTIP    V+ GNL++LI                      + L +N ++GKIP  +  L  L  L+L +N L+G +PR+L    SL  +D++SN+L G +P
Sbjct:  432 DLSFNELTGPIPKEIWMLPNLSDLVMWANNLTGTIPEGVCVKGGNLETLILNNNLLTGSIPESISRCTNMIWISLSSNRLTGKIPSGIGNLSKLAILQLGNNSLSGNVPRQLGNCKSLIWLDLNSNNLTGDLP 564          

HSP 4 Score: 69.3218 bits (168), Expect = 2.379e-11
Identity = 44/125 (35.20%), Postives = 70/125 (56.00%), Query Frame = -1
Query:  352 LGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLA-KLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS-GPFEHIPLNNFENN 720
            + N+ LSG +  ELGK + L+ ++L  N + G IP E+  L +L  L ++ NN++G IP  +  K  +L  L LN+N LTG IP  +   +++  + +SSN L G IP+  G    + +    NN
Sbjct:  409 IANNYLSGTVPMELGKCKSLKTIDLSFNELTGPIPKEIWMLPNLSDLVMWANNLTGTIPEGVCVKGGNLETLILNNNLLTGSIPESISRCTNMIWISLSSNRLTGKIPSGIGNLSKLAILQLGNN 533          
BLAST of CN182096 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12
Identity = 40/109 (36.70%), Postives = 65/109 (59.63%), Query Frame = -1
Query:  397 LGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGN-LKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPT 720
            L +  L+G +   L     LQ L+L  N++ G+IP ++ + L  L++LDL  N + G IP  + + K L  L L+DN+L+G IP +L  +  L+ + ++ NDL GTIP+
Sbjct:   79 LQSMQLAGEIPESLKLCRSLQSLDLSGNDLSGSIPSQICSWLPYLVTLDLSGNKLGGSIPTQIVECKFLNALILSDNKLSGSIPSQLSRLDRLRRLSLAGNDLSGTIPS 187          
BLAST of CN182096 vs. ExPASy Swiss-Prot
Match: PGIP1_ARATH (Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana GN=PGIP1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12
Identity = 42/107 (39.25%), Postives = 63/107 (58.88%), Query Frame = -1
Query:  394 SNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGI-SSLKVVDVSSNDLCGTIPTS 711
            SNL+G + P + KL++L+ L L   N+ G IP  +  LK+L  L+L  N++SG IP SL+ L  ++ L L+ N+LTG IP        ++  + +S N L G IP S
Sbjct:  105 SNLTGTIQPTIAKLKNLRMLRLSWTNLTGPIPDFISQLKNLEFLELSFNDLSGSIPSSLSTLPKILALELSRNKLTGSIPESFGSFPGTVPDLRLSHNQLSGPIPKS 211          
BLAST of CN182096 vs. ExPASy Swiss-Prot
Match: Y2165_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana GN=At2g16250 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.794e-12
Identity = 38/109 (34.86%), Postives = 61/109 (55.96%), Query Frame = -1
Query:  400 DLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGI-SSLKVVDVSSNDLCGTIP 723
            D+ ++ L+G + P LG L  L +L    N+    IP ELG+L +L+  DL  N++SG +P  L KL  L  + + DN L+G +P +L    S L+ + +  N   G++P
Sbjct:  206 DVSSNYLTGPIPPGLGALSKLIHLNFSSNSFSSPIPSELGDLVNLVDFDLSINSLSGSVPQELRKLSKLQLMAIGDNLLSGTLPVDLFSAESQLQTLVLRENGFSGSLP 314          

HSP 2 Score: 70.4774 bits (171), Expect = 1.068e-11
Identity = 40/109 (36.70%), Postives = 63/109 (57.80%), Query Frame = -1
Query:  397 DLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPT 723
            DL + +++G +   LG L  L+ L L +N++   +P  LG L +L  LDL  N+ +G +P S + LK+L+ L ++ N LTG IP  L  +S L  ++ SSN     IP+
Sbjct:  134 DLSSCSVNGVVPFTLGNLTSLRTLNLSQNSLTSLVPSSLGQLLNLSQLDLSRNSFTGVLPQSFSSLKNLLTLDVSSNYLTGPIPPGLGALSKLIHLNFSSNSFSSPIPS 242          

HSP 3 Score: 69.707 bits (169), Expect = 1.822e-11
Identity = 39/108 (36.11%), Postives = 61/108 (56.48%), Query Frame = -1
Query:  400 DLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 723
            DL  ++ +G L      L++L  L++  N + G IP  LG L  LI L+  +N+ S  IP  L  L +LV   L+ N L+G +P+EL  +S L+++ +  N L GT+P
Sbjct:  182 DLSRNSFTGVLPQSFSSLKNLLTLDVSSNYLTGPIPPGLGALSKLIHLNFSSNSFSSPIPSELGDLVNLVDFDLSINSLSGSVPQELRKLSKLQLMAIGDNLLSGTLP 289          
BLAST of CN182096 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.794e-12
Identity = 49/154 (31.82%), Postives = 84/154 (54.55%), Query Frame = -1
Query:  283 LGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS----GPFEHIPLNNFENNPRLEGPELLGLASYDT----NCS*TID 720
            LGN  L+G +  E G +  L  L L  N + G +P+ELGNL ++  + L +NN +G+IP + AKL +L   R++DN+L+G IP  +   + L+ + + ++ L G IP +       + + +++  N P    P+L  +   +T    NC+ T D
Sbjct:  118 LGN-RLTGPIPKEFGNITTLTSLVLEANQLSGELPLELGNLPNIQQMILSSNNFNGEIPSTFAKLTTLRDFRVSDNQLSGTIPDFIQKWTKLERLFIQASGLVGPIPIAIASLVELKDLRISDL-NGPESPFPQLRNIKKMETLILRNCNLTGD 269          

HSP 2 Score: 70.0922 bits (170), Expect = 1.395e-11
Identity = 41/108 (37.96%), Postives = 60/108 (55.56%), Query Frame = -1
Query:  400 DLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 723
            DL  + L+G + PE G L  L  + L  N + G IP E GN+ +L SL L  N +SG++P  L  L ++  + L+ N   G+IP     +++L+   VS N L GTIP
Sbjct:   93 DLSRNYLNGSIPPEWGVLP-LVNIWLLGNRLTGPIPKEFGNITTLTSLVLEANQLSGELPLELGNLPNIQQMILSSNNFNGEIPSTFAKLTTLRDFRVSDNQLSGTIP 199          
The following BLAST results are available for this feature:
BLAST of CN182096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
PGIP1_PHAVU1.262e-1237.38Polygalacturonase inhibitor 1 OS=Phaseolus vulgari... [more]
Y5332_ARATH1.648e-1236.59Probable inactive receptor kinase At5g53320 OS=Ara... [more]
RPKL_ARATH1.648e-1233.33Receptor protein kinase-like protein At4g34220 OS=... [more]
RKF1_ARATH1.648e-1239.05Probable LRR receptor-like serine/threonine-protei... [more]
PSKR2_ARATH2.152e-1241.41Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
BRL1_ARATH2.152e-1237.50Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
Y1719_ARATH3.671e-1236.70Probable inactive receptor kinase At1g27190 OS=Ara... [more]
PGIP1_ARATH3.671e-1239.25Polygalacturonase inhibitor 1 OS=Arabidopsis thali... [more]
Y2165_ARATH4.794e-1234.86Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH4.794e-1231.82Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001P05_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001P05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182096 ID=CN182096; Name=CN182096; organism=Citrus sinensis; type=EST; length=729bp
TAAGCGTTTGACACATTTAATACTTTTTTATATGGAACTCTCATAGATGG
AATAGAAAACACTTGGCTAGTATTGTATTACATCAATAAAATTCTCATCT
TGAAAGTTGAAACATTTTTATGAAGATCACAACGATGCTATTACAGATGC
ATTTAAGCAGTATAATACAATTTACATATATGATGGCTTCATTTCACCAA
TAACACTATGCTTTTTAGGTAAAGACGCTTTCAATCTTCGCGGACACATC
TATTCGAAACCTGAGTAGAGCTTGAAGCAACAATCAATCGTTTATGAGCA
GTTTGTGTCATAACTTGCAAGTCCCAGCAACTCTGGACCTTCTAATCGAG
GGTTATTCTCAAAGTTGTTGAGTGGGATGTGTTCAAATGGTCCGCTTGTA
GGAATTGTTCCACACAGATCATTGCTTGAAACATCCACAACTTTGAGACT
TGAAATTCCAACAAGTTCCCTGGGAATTTGTCCAGTTAGCCGATTATCGT
TAAGCCGCAAAAAAACAAGAGATTTCAATTTAGCCAAGGAAGGAGGGATT
TTCCCCGAGATGTTGTTATTATACAAGTCCAAGCTGATGAGGCTCTTCAA
GTTACCGAGCTCGACAGGGATAGTTCCTTGGATGTTGTTTTTGTAAAGTT
CCAGGTATTGCAAATGCTCGAGCTTGCCCAGTTCAGGGACGAGACGGCCG
GATAGATTTGAATTACCCAAATCCGCAAG
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