CN182096

Overview
NameCN182096
Unique NameCN182096
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length729
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182096 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.379e-11
Identity = 47/132 (35.61%), Postives = 74/132 (56.06%), Query Frame = -1
Query:  337 LADLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS-GPFEHIPLNNFENNPRLEG 729
            +  L ++ LSG L P++  L  L Y+ L  NN  G +P  +   + L  LDL  N+ +GKIP +   LK L  L L +N+L+G +P   +   SL+ +++S+N L G+IP++ G F   P ++F  N  L G
Sbjct:  116 ILSLRSNLLSGNLPPDIHSLPSLDYIYLQHNNFSGEVPSFVS--RQLNILDLSFNSFTGKIPATFQNLKQLTGLSLQNNKLSGPVPN--LDTVSLRRLNLSNNHLNGSIPSALGGF---PSSSFSGNTLLCG 240          
BLAST of CN182096 vs. ExPASy Swiss-Prot
Match: Y5815_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150 OS=Arabidopsis thaliana GN=At5g58150 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.108e-11
Identity = 42/108 (38.89%), Postives = 63/108 (58.33%), Query Frame = -1
Query:  400 DLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 723
            DL  + ++  L  +L  L  L+ L L  N I   +P  +GN  SL +LDL  N+ISGKIP +++ L +L  L+L++N     +P ELV   SL  +D+SSN L  ++P
Sbjct:   96 DLSGNKITS-LPSDLWSLSLLESLNLSSNRISEPLPSNIGNFMSLHTLDLSFNSISGKIPAAISNLVNLTTLKLHNNDFQFGVPPELVHCRSLLSIDLSSNRLNESLP 202          
BLAST of CN182096 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.108e-11
Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = -1
Query:  400 DLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 723
            DL N+ +S  L  +   L  L+ L L  N I G+    +GN   L  LD+  NN SG IP ++  L SL  L+L+ N     IPR L+G  SL  +D+SSN L G++P
Sbjct:   98 DLSNNKISA-LPSDFWSLNTLKNLNLSFNKISGSFSSNVGNFGQLELLDISYNNFSGAIPEAVDSLVSLRVLKLDHNGFQMSIPRGLLGCQSLVSIDLSSNQLEGSLP 204          
BLAST of CN182096 vs. ExPASy Swiss-Prot
Match: Y3868_ARATH (Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11
Identity = 46/134 (34.33%), Postives = 74/134 (55.22%), Query Frame = -1
Query:  328 LADLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENNPRLEGPEL 729
            +  L +++L G +   +  L  ++ L  ++NN  GTIP  L +   L++LDL  N++SG IP SL  L  L  L L +N L+G IP        LK +++S N+L G++P+S   +  P ++F+ N  L G  L
Sbjct:   96 IISLRSNHLQGNIPSVILSLPFIRSLYFHENNFSGTIPPVLSH--RLVNLDLSANSLSGNIPTSLQNLTQLTDLSLQNNSLSGPIPNL---PPRLKYLNLSFNNLNGSVPSS--VKSFPASSFQGNSLLCGAPL 222          
BLAST of CN182096 vs. ExPASy Swiss-Prot
Match: PGIP1_ORYSJ (Polygalacturonase inhibitor 1 OS=Oryza sativa subsp. japonica GN=FOR1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.059e-11
Identity = 46/123 (37.40%), Postives = 67/123 (54.47%), Query Frame = -1
Query:  337 LSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENNPRLEG 705
            LSG +   L  L +LQ+L +   N+ G IP  L  ++SL S+DL +N+++G IP S + L +L  L L  N+LTG IP  LV     + + +S N L G IP     + I   +  +N RL G
Sbjct:  108 LSGPIPACLTALSNLQFLTISHTNVSGVIPDSLARIRSLDSVDLSHNSLTGPIPNSFSDLPNLRSLDLRSNKLTGCIPAGLVQ-GQFRSLILSYNQLTGPIPRDDAQDEINTVDLSHN-RLTG 228          
BLAST of CN182096 vs. ExPASy Swiss-Prot
Match: Y5020_ARATH (Probable inactive receptor kinase At5g10020 OS=Arabidopsis thaliana GN=At5g10020 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11
Identity = 36/94 (38.30%), Postives = 57/94 (60.64%), Query Frame = -1
Query:  400 LGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 681
            L     ++ L+L  N++ G +P ++G ++ +  L+L NN +SG++P  L KL  L+FL L++N   GQIP +L   S +   +VS NDL G IP
Sbjct:  464 LNSYPQMELLDLSTNSLTGMLPGDIGTMEKIKVLNLANNKLSGELPSDLNKLSGLLFLDLSNNTFKGQIPNKLP--SQMVGFNVSYNDLSGIIP 555          
BLAST of CN182096 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.923e-11
Identity = 45/118 (38.14%), Postives = 61/118 (51.69%), Query Frame = -1
Query:  352 LSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENN 705
            L+G L P+   L  L+YL L  N   G IP  L  L ++I ++L  NN  G+IP ++     L  L L DN+LTG IP   +    L+  +VSSN L G+IP   P   +P   F  N
Sbjct:   99 LNGPLPPDFANLTLLRYLYLQGNAFSGEIPSFLFTLPNIIRINLAQNNFLGRIPDNVNSATRLATLYLQDNQLTGPIPEIKI---KLQQFNVSSNQLNGSIP--DPLSGMPKTAFLGN 211          
BLAST of CN182096 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.923e-11
Identity = 45/137 (32.85%), Postives = 68/137 (49.64%), Query Frame = -1
Query:  310 LGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENNPRLEGPELLGLASY 720
            L ++ LSG++  +   L HL+ L L  N   G  P     L +LI LD+ +NN +G IP S+  L  L  L L +N  +G +P   +G+      +VS+N+L G+IP+S         +F  N  L G  L    S+
Sbjct:   98 LRSNRLSGQIPSDFSNLTHLRSLYLQHNEFSGEFPTSFTQLNNLIRLDISSNNFTGSIPFSVNNLTHLTGLFLGNNGFSGNLPSISLGLVDF---NVSNNNLNGSIPSS--LSRFSAESFTGNVDLCGGPLKPCKSF 229          
BLAST of CN182096 vs. ExPASy Swiss-Prot
Match: TMKL1_ARATH (Putative kinase-like protein TMKL1 OS=Arabidopsis thaliana GN=TMKL1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.923e-11
Identity = 40/111 (36.04%), Postives = 65/111 (58.56%), Query Frame = -1
Query:  400 LGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKL-KSLVFLRLNDNRLTGQIPRELVGIS---SLKVVDVSSNDLCGTIP 720
            L ++NL+G L  E+G+   LQ + L  N++ G+IP+ELG   SL  +DL  N ++G +PPS+  L   LV  +++ N L+G +P   +  S   +L+V+D+  N   G  P
Sbjct:  106 LPSANLTGSLPREIGEFSMLQSVFLNINSLSGSIPLELGYTSSLSDVDLSGNALAGVLPPSIWNLCDKLVSFKIHGNNLSGVLPEPALPNSTCGNLQVLDLGGNKFSGEFP 216          
BLAST of CN182096 vs. ExPASy Swiss-Prot
Match: PII2_ARATH (Piriformospora indica-insensitive protein 2 OS=Arabidopsis thaliana GN=PII-2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.923e-11
Identity = 44/117 (37.61%), Postives = 67/117 (57.26%), Query Frame = -1
Query:  394 LADLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVG-----ISSLKVVDVSSNDLCGTIPTS 729
            + DL  ++ SG L    G L  L  L+L  N ++G +P ELG LK+L  LDL NN  SG +  ++  ++SL  L L++N +  +   ++VG     +S+L V+D+S   L G IPTS
Sbjct:  219 ILDLSRNSFSGTLPTSFGDLVSLLKLDLSNNLLEGNLPQELGFLKNLTLLDLRNNRFSGGLSKNIENIQSLTELVLSNNPMGEE---DMVGTNWGKMSNLVVLDLSKMGLRGEIPTS 332          
The following BLAST results are available for this feature:
BLAST of CN182096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
Y5830_ARATH2.379e-1135.61Probable inactive receptor kinase At5g58300 OS=Ara... [more]
Y5815_ARATH3.108e-1138.89Probably inactive leucine-rich repeat receptor-lik... [more]
Y2242_ARATH3.108e-1139.81Probable LRR receptor-like serine/threonine-protei... [more]
Y3868_ARATH4.059e-1134.33Probable inactive receptor kinase At3g08680 OS=Ara... [more]
PGIP1_ORYSJ4.059e-1137.40Polygalacturonase inhibitor 1 OS=Oryza sativa subs... [more]
Y5020_ARATH5.301e-1138.30Probable inactive receptor kinase At5g10020 OS=Ara... [more]
Y5659_ARATH6.923e-1138.14Probable inactive receptor kinase At5g16590 OS=Ara... [more]
Y2267_ARATH6.923e-1132.85Probable inactive receptor kinase At2g26730 OS=Ara... [more]
TMKL1_ARATH6.923e-1136.04Putative kinase-like protein TMKL1 OS=Arabidopsis ... [more]
PII2_ARATH6.923e-1137.61Piriformospora indica-insensitive protein 2 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001P05_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001P05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182096 ID=CN182096; Name=CN182096; organism=Citrus sinensis; type=EST; length=729bp
TAAGCGTTTGACACATTTAATACTTTTTTATATGGAACTCTCATAGATGG
AATAGAAAACACTTGGCTAGTATTGTATTACATCAATAAAATTCTCATCT
TGAAAGTTGAAACATTTTTATGAAGATCACAACGATGCTATTACAGATGC
ATTTAAGCAGTATAATACAATTTACATATATGATGGCTTCATTTCACCAA
TAACACTATGCTTTTTAGGTAAAGACGCTTTCAATCTTCGCGGACACATC
TATTCGAAACCTGAGTAGAGCTTGAAGCAACAATCAATCGTTTATGAGCA
GTTTGTGTCATAACTTGCAAGTCCCAGCAACTCTGGACCTTCTAATCGAG
GGTTATTCTCAAAGTTGTTGAGTGGGATGTGTTCAAATGGTCCGCTTGTA
GGAATTGTTCCACACAGATCATTGCTTGAAACATCCACAACTTTGAGACT
TGAAATTCCAACAAGTTCCCTGGGAATTTGTCCAGTTAGCCGATTATCGT
TAAGCCGCAAAAAAACAAGAGATTTCAATTTAGCCAAGGAAGGAGGGATT
TTCCCCGAGATGTTGTTATTATACAAGTCCAAGCTGATGAGGCTCTTCAA
GTTACCGAGCTCGACAGGGATAGTTCCTTGGATGTTGTTTTTGTAAAGTT
CCAGGTATTGCAAATGCTCGAGCTTGCCCAGTTCAGGGACGAGACGGCCG
GATAGATTTGAATTACCCAAATCCGCAAG
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