CN188879

Overview
NameCN188879
Unique NameCN188879
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PORYE (Acetylglutamate kinase OS=Porphyra yezoensis GN=argB PE=3 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.077e-34
Identity = 82/140 (58.57%), Postives = 94/140 (67.14%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGF 694
            RV +LSE+LP+IQ+F  + IV+KYGGAAMK NQK                   RP+LVHGGGPEINFWL R  I P F DG+RVTD  TM+IV MVLVGRVNK LV+ INK G  +VGLSG DG L T RP+   A LGF
Sbjct:    7 RVKVLSEALPYIQQFSSRIIVIKYGGAAMK-NQK--LKDQVISDLVFLSFIGLRPILVHGGGPEINFWLDRLKILPKFDDGVRVTDQPTMDIVEMVLVGRVNKDLVATINKQGGKSVGLSGKDGLLITPRPN-GKANLGF 142          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_THEEB (Acetylglutamate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=argB PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.400e-34
Identity = 79/141 (56.03%), Postives = 96/141 (68.09%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQ-KDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGF 694
            RV +LSE+LP++Q F G+T VVKYGGAAMK  Q KD+                 RPV+VHGGGPEIN WL +  IEP F++GLRVTDA TM++V MVLVGRVNK +V+LIN+AG  AVGL G DG L  AR +     +GF
Sbjct:    7 RVRVLSEALPYLQAFAGRTFVVKYGGAAMKEEQLKDSVIRDIVFLSYVGI----RPVVVHGGGPEINTWLAKLNIEPQFKNGLRVTDAATMDVVEMVLVGRVNKEIVTLINQAGGQAVGLCGKDGNLIRAR-AKGEESIGF 142          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_SYNS3 (Acetylglutamate kinase OS=Synechococcus sp. (strain CC9311) GN=argB PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.346e-34
Identity = 76/131 (58.02%), Postives = 92/131 (70.23%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP 667
            RV +LSE+LP+IQ+F G+ IVVKYGGAAM   +  +                 +PV+VHGGGPEIN WLKR  I   FRDGLRVTDA TM++V MVLVGRVNK +V+ +N+ GA+AVGLSG DGRL  ARP
Sbjct:    6 RVSVLSEALPYIQRFAGRRIVVKYGGAAMVHAELRDAVFRDIALLASVGV---QPVVVHGGGPEINTWLKRLDIRSEFRDGLRVTDAETMDVVEMVLVGRVNKQIVNGLNRLGASAVGLSGSDGRLVEARP 133          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_SYNR3 (Acetylglutamate kinase OS=Synechococcus sp. (strain RCC307) GN=argB PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.653e-33
Identity = 72/135 (53.33%), Postives = 93/135 (68.89%), Query Frame = 2
Query:  260 TPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            TP   RV++LSE+LP+IQ+FRG+ +V+KYGGAAM    +++                  PV+VHGGGPEIN WL R  IEPVF++GLRVT  +TM++V MVLVGRVNK +V+ +N+ G  AVGLSG DG L  AR
Sbjct:    9 TPDVLRVEVLSEALPYIQRFRGRRVVIKYGGAAMV---REDLRDAVFRDVALLASVGVEPVVVHGGGPEINQWLNRLSIEPVFQEGLRVTCPDTMDVVEMVLVGRVNKQIVNGLNRVGGRAVGLSGADGGLVQAR 140          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PROMM (Acetylglutamate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=argB PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.653e-33
Identity = 81/157 (51.59%), Postives = 97/157 (61.78%), Query Frame = 2
Query:  221 SLTSAATAVTDTQTPA--------EFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP 667
            S  SAA  V   QT +          RV +LSE+LP+IQ+F G+ IV+KYGGAAM      N                  PV+VHGGGPEIN WL+R  I   FRDGLRVTDA+TM++V MVLVGRVNK +V+ +N+ GA AVGLSG DG L  ARP
Sbjct:    3 SAKSAAALVEPCQTNSARRLTEDDSLRVSVLSEALPYIQRFSGRRIVIKYGGAAMA---HANLQEAVFRDLALLVSVGVEPVVVHGGGPEINQWLERLEIPAQFRDGLRVTDADTMDVVEMVLVGRVNKQIVNGLNQLGAKAVGLSGSDGNLVEARP 156          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PROM3 (Acetylglutamate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=argB PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.465e-33
Identity = 81/157 (51.59%), Postives = 97/157 (61.78%), Query Frame = 2
Query:  221 SLTSAATAVTDTQTPA--------EFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP 667
            S  SAA  V   QT +          RV +LSE+LP+IQ+F G+ IV+KYGGAAM      N                  PV+VHGGGPEIN WL+R  I   FRDGLRVTDA+TM++V MVLVGRVNK +V+ +N+ GA AVGLSG DG L  ARP
Sbjct:    3 SAKSAAALVEPCQTNSARRLTEDDSLRVSVLSEALPYIQRFSGRRIVIKYGGAAMA---HANLQEAVFRDLALLVSVGVEPVVVHGGGPEINQWLERLEIPAKFRDGLRVTDADTMDVVEMVLVGRVNKQIVNGLNQLGAKAVGLSGSDGSLVEARP 156          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_GLOVI (Acetylglutamate kinase OS=Gloeobacter violaceus GN=argB PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.465e-33
Identity = 77/145 (53.10%), Postives = 96/145 (66.21%), Query Frame = 2
Query:  233 AATAVTDTQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP 667
            A +  T   +PA+ RV +L+E+LP+IQ+F GKTIVVKYGGAAM    K+N                 +PV+VHGGGPEIN WL+R  I   F  GLRVTD  TME+V MVL G+VNKS+V +IN+AG +AVGL G DG +  ARP
Sbjct:    5 APSCFTAIISPAD-RVQVLAEALPYIQRFAGKTIVVKYGGAAMV---KENLRDLVIRDIVFLATVGIKPVVVHGGGPEINSWLERLNIPVQFVGGLRVTDKITMEVVEMVLAGKVNKSIVQMINQAGGSAVGLCGRDGSIIEARP 145          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_SYNPW (Acetylglutamate kinase OS=Synechococcus sp. (strain WH7803) GN=argB PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.720e-33
Identity = 74/130 (56.92%), Postives = 91/130 (70.00%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            RV +LSE+LP+IQ+F G+ IVVKYGGAAM   +  +                 +PV+VHGGGPEIN WLKR  I+P FR+GLRVTDA TM++V MVLVGRVNK +V+ +N+ GA AVGLSG DG L  AR
Sbjct:   14 RVSVLSEALPYIQRFAGRRIVVKYGGAAMVHAELQSAVFRDLALLRSVGV---QPVVVHGGGPEINHWLKRLDIDPEFREGLRVTDAATMDVVEMVLVGRVNKQIVNGLNRLGARAVGLSGSDGCLVEAR 140          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_SYNS9 (Acetylglutamate kinase OS=Synechococcus sp. (strain CC9902) GN=argB PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.317e-32
Identity = 74/131 (56.49%), Postives = 90/131 (68.70%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP 667
            RV +LSE+LP+IQ+F G+ IV+KYGGAAM   +                    +PV+VHGGGPEIN WLKR  I   FRDGLRVTDA+TM++V MVLVGRVNK +V+ +N+ GA AVGLSG DG L  ARP
Sbjct:   13 RVSVLSEALPYIQRFAGRRIVIKYGGAAMAHAE---LRAAVFRDIALLACVGVQPVVVHGGGPEINQWLKRLQIPAEFRDGLRVTDADTMDVVEMVLVGRVNKQIVNGLNQLGARAVGLSGSDGGLVEARP 140          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_SYNSC (Acetylglutamate kinase OS=Synechococcus sp. (strain CC9605) GN=argB PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.934e-32
Identity = 74/136 (54.41%), Postives = 91/136 (66.91%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSA 682
            RV +LSE+LP+IQ F G+ IV+KYGGAAM   +  +                 RPV+VHGGGPEIN WL+R  I   FRDGLRVTDA+TM++V MVLVGRVNK +V+ +N+ G  AVGLSG DG L  ARP  N +
Sbjct:   13 RVSVLSEALPYIQSFAGRRIVIKYGGAAMAHAELRSAVFRDLALLACVGV---RPVVVHGGGPEINQWLQRLEIPAEFRDGLRVTDADTMDVVEMVLVGRVNKQIVNGLNQLGTRAVGLSGSDGSLVEARPWGNGS 145          
The following BLAST results are available for this feature:
BLAST of CN188879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 422
Match NameE-valueIdentityDescription
ARGB_PORYE1.077e-3458.57Acetylglutamate kinase OS=Porphyra yezoensis GN=ar... [more]
ARGB_THEEB2.400e-3456.03Acetylglutamate kinase OS=Thermosynechococcus elon... [more]
ARGB_SYNS35.346e-3458.02Acetylglutamate kinase OS=Synechococcus sp. (strai... [more]
ARGB_SYNR32.653e-3353.33Acetylglutamate kinase OS=Synechococcus sp. (strai... [more]
ARGB_PROMM2.653e-3351.59Acetylglutamate kinase OS=Prochlorococcus marinus ... [more]
ARGB_PROM33.465e-3351.59Acetylglutamate kinase OS=Prochlorococcus marinus ... [more]
ARGB_GLOVI3.465e-3353.10Acetylglutamate kinase OS=Gloeobacter violaceus GN... [more]
ARGB_SYNPW7.720e-3356.92Acetylglutamate kinase OS=Synechococcus sp. (strai... [more]
ARGB_SYNS91.317e-3256.49Acetylglutamate kinase OS=Synechococcus sp. (strai... [more]
ARGB_SYNSC2.934e-3254.41Acetylglutamate kinase OS=Synechococcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006P04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006P04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188879 ID=CN188879; Name=CN188879; organism=Citrus sinensis; type=EST; length=696bp
CATTAATCTCTCTGATCTCTGAACCCAAGCAATATCTGCGGAGAATATGG
CCGCCGCCGCCGCTGCCTCCCTAGAAATTGCTCCTTTTTTACAGTCACAG
CTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCAGTCTCCCTCCGTCTT
CAAAATCAAAACCCCACATGTCGAGAATTTCGCTTCGAACCACCGCACCG
AAATAACAAAATCATCCCGCTCTCTCACATCAGCAGCAACAGCCGTAACT
GACACACAGACCCCAGCCGAGTTCCGTGTCGACATTCTTTCCGAATCTCT
TCCCTTCATTCAGAAATTCCGCGGAAAGACCATCGTCGTCAAATACGGCG
GCGCCGCCATGAAACCCAACCAAAAGGACAACCTCCTCGCCTCCGTCGTA
AAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCGTCCTGTCTTGGTCCA
CGGCGGCGGTCCTGAGATCAATTTCTGGCTCAAACGTTTCGGAATCGAGC
CCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCCAACACTATGGAGATC
GTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAGCTTGGTTTCTCTCAT
CAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGGGCATGGACGGGCGCC
TCTTCACGGCCCGGCCCAGCCCAAACTCCGCTAAACTGGGTTTCGT
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