CN188879

Overview
NameCN188879
Unique NameCN188879
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PROM1 (Acetylglutamate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=argB PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.746e-30
Identity = 69/130 (53.08%), Postives = 84/130 (64.62%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            RV +LSE+LP+IQ+F  K IV+KYGG+AM      N                   V+VHGGGPEIN WL++ GI+PVF DGLR+TD  TM++V MVL GRVNK +VS IN  G  AVGL G+DG L  AR
Sbjct:   25 RVSVLSEALPYIQRFANKRIVIKYGGSAMADKTLQNAVFRDLALLSSVGVQI---VVVHGGGPEINQWLEKLGIKPVFLDGLRITDTETMDVVEMVLTGRVNKQIVSGINNHGRLAVGLCGIDGGLIEAR 151          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_THEP3 (Acetylglutamate kinase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=argB PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.586e-30
Identity = 68/140 (48.57%), Postives = 89/140 (63.57%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGF 694
            +  +L E+LP+I+KF GKT+V+KYGG+AM      N                  P++VHGGGPEIN  L+R GIE  F +GLRVTD  TMEIV MVL GR+NK +VSLIN+ G  A+G+SG DGRL  A    ++  +G+
Sbjct:   13 KAQVLIEALPYIKKFSGKTVVIKYGGSAMLDC---NLKRMVMQDIVLMKFVGLNPIVVHGGGPEINKMLERLGIESKFVNGLRVTDEATMEIVEMVLTGRINKEIVSLINELGGQAIGVSGKDGRLLKAEKDTSNGDIGY 149          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PROMP (Acetylglutamate kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=argB PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.117e-30
Identity = 68/130 (52.31%), Postives = 85/130 (65.38%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            RV ILSE+LP+IQ+F G+ IVVKYGG+ M+  +                     PV++HGGGPEIN WL +  I P F +GLRVTD  TMEIV MVL+GRVNK +V  INK G+ AVG+SG+DG L  +R
Sbjct:    7 RVSILSEALPYIQRFSGRKIVVKYGGSIMEDEKLKEAFFRDIALLSSVGVC---PVVIHGGGPEINRWLNKLEISPKFENGLRVTDEKTMEIVEMVLMGRVNKQIVRGINKTGSLAVGISGLDGNLIQSR 133          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_THETN (Acetylglutamate kinase OS=Thermoanaerobacter tengcongensis GN=argB PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.363e-29
Identity = 68/140 (48.57%), Postives = 90/140 (64.29%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGF 694
            +  IL E+LP+I+KF GKT+V+KYGG+AM      N                  PV+VHGGGPEI+ +LK+ GIE  F +GLRVTD  T EIV MVLVG++NK +VS+IN+ G  AVG+SG DG+L  A    ++  LG+
Sbjct:   13 KAHILVEALPYIKKFSGKTVVIKYGGSAMLDC---NLKKMVMQDVVLMKFVGLNPVIVHGGGPEISSFLKKLGIESKFVNGLRVTDEKTAEIVEMVLVGKINKEIVSMINELGGMAVGISGKDGKLLKAEKDLSNGDLGY 149          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_THEPX (Acetylglutamate kinase OS=Thermoanaerobacter sp. (strain X514) GN=argB PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29
Identity = 67/140 (47.86%), Postives = 88/140 (62.86%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGF 694
            +  +L E+LP+I+KF G T+V+KYGG+AM      N                  P++VHGGGPEIN  L+R GIE  F +GLRVTD  TMEIV MVL GR+NK +VSLIN+ G  A+G+SG DGRL  A    ++  +G+
Sbjct:   13 KAQVLIEALPYIKKFSGTTVVIKYGGSAMLDC---NLKRMVMQDIVLMKFVGLNPIVVHGGGPEINKMLERLGIESKFVNGLRVTDEATMEIVEMVLTGRINKEIVSLINELGGQAIGVSGKDGRLLKAEKDTSNGDIGY 149          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PROM5 (Acetylglutamate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=argB PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.324e-29
Identity = 68/130 (52.31%), Postives = 83/130 (63.85%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            RV ILSE+LP+IQ F G+ IVVKYGG+ M+  +                     PV++HGGGPEIN WL +  I P F  GLRVTD  TMEIV MVL+GRVNK +V  INK G+ AVG+SG+DG L  +R
Sbjct:    6 RVSILSEALPYIQSFSGRKIVVKYGGSIMEDEKLKKAFFRDIALLSSVGVC---PVVIHGGGPEINRWLSKLEISPKFEKGLRVTDDKTMEIVEMVLMGRVNKQIVRGINKTGSLAVGISGLDGNLIQSR 132          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_GRATL (Acetylglutamate kinase OS=Gracilaria tenuistipitata var. liui GN=argB PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.833e-29
Identity = 66/129 (51.16%), Postives = 87/129 (67.44%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTA 661
            RV ILS++LPF+Q+F G+T+VVKYGG+AMK     +                 + V+VHGGGP IN WLK+  I+P F +G+RVTD +TME+V MVLVG+VNK LV+L+N++   AVGLSG D  L  A
Sbjct:    7 RVQILSDALPFVQRFHGRTLVVKYGGSAMKNVYLKSKIIEDILFLSYIGI---KVVIVHGGGPMINHWLKQVNIQPKFFNGIRVTDKDTMELVEMVLVGKVNKDLVTLLNRSSNLAVGLSGKDANLVVA 132          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_CYACA (Acetylglutamate kinase OS=Cyanidium caldarium GN=argB PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.356e-28
Identity = 64/130 (49.23%), Postives = 79/130 (60.77%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            R  IL E+LP+IQ+FRG   V+KYGGAAMK                       + V VHGGGPEINFWL +  +E  F DG+R+TD  TM++V MVL G++NK LVSL+N  G   VGL G DG + TAR
Sbjct:    7 RTQILIEALPYIQQFRGAIFVIKYGGAAMKDLISKERLIADIVFLSCIGL---KLVCVHGGGPEINFWLNKMNVESKFHDGIRITDELTMQVVEMVLAGKINKELVSLLNNKGVKGVGLCGKDGTILTAR 133          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_CHRSD (Acetylglutamate kinase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=argB PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.356e-28
Identity = 67/129 (51.94%), Postives = 85/129 (65.89%), Query Frame = 2
Query:  278 VDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            V+ILSE+LP+IQ+F GKT+VVKYGG AM    +D                   PV+VHGGGP+I   L+R  IE  F  G+RVTDA TM++V MVL G VNKS+V+LIN++G  A+GL+G DG   TAR
Sbjct:   12 VEILSEALPYIQRFSGKTVVVKYGGNAMT---EDTLIDSFARDMVLMKEVGINPVVVHGGGPQIGELLERLNIESRFVGGMRVTDAETMDVVEMVLGGLVNKSIVNLINRSGGKAIGLTGKDGAQITAR 137          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_SYNWW (Acetylglutamate kinase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=argB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.766e-28
Identity = 66/140 (47.14%), Postives = 87/140 (62.14%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGF 694
            + +IL E+LP+I+ F G+ +V+KYGGAAM   +                     P++VHGGGPEIN  L R GI+  F +G RVTDA TMEIV MVL G+VNK +V+ I+ +G  AVG+SG DG L  A P+  S K+GF
Sbjct:    8 KAEILVEALPYIKDFYGRRVVIKYGGAAMTDCELKQKVMQDIVLMKFVGM---HPIVVHGGGPEINQMLSRLGIQSEFVNGFRVTDAATMEIVEMVLGGKVNKEIVAGIHASGGKAVGISGKDGMLIQAHPADGSGKMGF 144          
The following BLAST results are available for this feature:
BLAST of CN188879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 422
Match NameE-valueIdentityDescription
ARGB_PROM12.746e-3053.08Acetylglutamate kinase OS=Prochlorococcus marinus ... [more]
ARGB_THEP33.586e-3048.57Acetylglutamate kinase OS=Thermoanaerobacter pseud... [more]
ARGB_PROMP6.117e-3052.31Acetylglutamate kinase OS=Prochlorococcus marinus ... [more]
ARGB_THETN1.363e-2948.57Acetylglutamate kinase OS=Thermoanaerobacter tengc... [more]
ARGB_THEPX1.780e-2947.86Acetylglutamate kinase OS=Thermoanaerobacter sp. (... [more]
ARGB_PROM52.324e-2952.31Acetylglutamate kinase OS=Prochlorococcus marinus ... [more]
ARGB_GRATL8.833e-2951.16Acetylglutamate kinase OS=Gracilaria tenuistipitat... [more]
ARGB_CYACA3.356e-2849.23Acetylglutamate kinase OS=Cyanidium caldarium GN=a... [more]
ARGB_CHRSD3.356e-2851.94Acetylglutamate kinase OS=Chromohalobacter salexig... [more]
ARGB_SYNWW9.766e-2847.14Acetylglutamate kinase OS=Syntrophomonas wolfei su... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006P04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006P04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188879 ID=CN188879; Name=CN188879; organism=Citrus sinensis; type=EST; length=696bp
CATTAATCTCTCTGATCTCTGAACCCAAGCAATATCTGCGGAGAATATGG
CCGCCGCCGCCGCTGCCTCCCTAGAAATTGCTCCTTTTTTACAGTCACAG
CTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCAGTCTCCCTCCGTCTT
CAAAATCAAAACCCCACATGTCGAGAATTTCGCTTCGAACCACCGCACCG
AAATAACAAAATCATCCCGCTCTCTCACATCAGCAGCAACAGCCGTAACT
GACACACAGACCCCAGCCGAGTTCCGTGTCGACATTCTTTCCGAATCTCT
TCCCTTCATTCAGAAATTCCGCGGAAAGACCATCGTCGTCAAATACGGCG
GCGCCGCCATGAAACCCAACCAAAAGGACAACCTCCTCGCCTCCGTCGTA
AAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCGTCCTGTCTTGGTCCA
CGGCGGCGGTCCTGAGATCAATTTCTGGCTCAAACGTTTCGGAATCGAGC
CCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCCAACACTATGGAGATC
GTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAGCTTGGTTTCTCTCAT
CAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGGGCATGGACGGGCGCC
TCTTCACGGCCCGGCCCAGCCCAAACTCCGCTAAACTGGGTTTCGT
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