CN188879

Overview
NameCN188879
Unique NameCN188879
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_THENN (Acetylglutamate kinase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=argB PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.275e-27
Identity = 64/139 (46.04%), Postives = 86/139 (61.87%), Query Frame = 2
Query:  278 VDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGF 694
            V++L E+LP+I++F GKT V+K+GG+AMK   ++                  +PV+VHGGGP I+  +K  GIEPVF++G RVTD  TMEIV MVLVG++NK +V  IN  G  AVG+ G D +L  A        LGF
Sbjct:    6 VNVLLEALPYIKEFYGKTFVIKFGGSAMK---EEKAKKAFIQDIILLKYTGIKPVIVHGGGPAISQMMKELGIEPVFKNGHRVTDERTMEIVEMVLVGKINKEIVMNINLHGGRAVGICGKDSKLIVAEKETKYGDLGF 141          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_HYPNA (Acetylglutamate kinase OS=Hyphomonas neptunium (strain ATCC 15444) GN=argB PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.275e-27
Identity = 68/144 (47.22%), Postives = 87/144 (60.42%), Query Frame = 2
Query:  254 TQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAK 685
            TQ+ A+F    LSE+LP+IQ++ G+TIVVKYGG AM      +                  PV+VHGGGP+I   L + GI   F+DGLRVTD  TME+V MVL G +NKS+V  IN+AG  AVGLSG DG L  A  +  + +
Sbjct:    3 TQSDAQFTARTLSEALPYIQRYAGQTIVVKYGGHAMGDA---SLALSFARDVVLLKALGLNPVIVHGGGPQIGKLLDKLGIVSEFKDGLRVTDEATMEVVEMVLSGPINKSIVRAINQAGGKAVGLSGADGNLLRAEKATRTTR 143          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_THESQ (Acetylglutamate kinase OS=Thermotoga sp. (strain RQ2) GN=argB PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.841e-27
Identity = 61/139 (43.88%), Postives = 87/139 (62.59%), Query Frame = 2
Query:  278 VDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGF 694
            V++L E+LP+I++F GKT V+K+GG+AMK   ++N                 +P++VHGGGP I+  +K  GIEPVF++G RVTD  TMEIV MVLVG++NK +V  +N  G  AVG+ G D +L  A        +G+
Sbjct:    6 VNVLLEALPYIKEFYGKTFVIKFGGSAMK---QENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNGHRVTDEKTMEIVEMVLVGKINKEIVMNLNLHGGRAVGICGKDSKLIVAEKETKHGDIGY 141          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_THEP1 (Acetylglutamate kinase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=argB PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.841e-27
Identity = 61/139 (43.88%), Postives = 87/139 (62.59%), Query Frame = 2
Query:  278 VDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGF 694
            V++L E+LP+I++F GKT V+K+GG+AMK   ++N                 +P++VHGGGP I+  +K  GIEPVF++G RVTD  TMEIV MVLVG++NK +V  +N  G  AVG+ G D +L  A        +G+
Sbjct:    6 VNVLLEALPYIKEFYGKTFVIKFGGSAMK---QENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNGHRVTDEKTMEIVEMVLVGKINKEIVMNLNLHGGRAVGICGKDSKLIVAEKETKHGDIGY 141          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_THEMA (Acetylglutamate kinase OS=Thermotoga maritima GN=argB PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.841e-27
Identity = 61/139 (43.88%), Postives = 87/139 (62.59%), Query Frame = 2
Query:  278 VDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGF 694
            V++L E+LP+I++F GKT V+K+GG+AMK   ++N                 +P++VHGGGP I+  +K  GIEPVF++G RVTD  TMEIV MVLVG++NK +V  +N  G  AVG+ G D +L  A        +G+
Sbjct:    6 VNVLLEALPYIKEFYGKTFVIKFGGSAMK---QENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNGHRVTDEKTMEIVEMVLVGKINKEIVMNLNLHGGRAVGICGKDSKLIVAEKETKHGDIGY 141          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_DESMR (Acetylglutamate kinase OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=argB PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.841e-27
Identity = 65/130 (50.00%), Postives = 83/130 (63.85%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +  +L E+LP+I+ F G+T+V+KYGG AM   Q                     PV+VHGGGP+I   LK   IE  F+ GLRVTD  TM++V MVLVG+VNK++V+LIN  G +AVGLSG DGRL TAR
Sbjct:    7 KAHLLLEALPYIRNFYGQTVVIKYGGHAMVDEQLQESFALNVILLKYIGI---NPVIVHGGGPQIGRMLKLLNIESQFKQGLRVTDDATMDVVEMVLVGKVNKNIVNLINLKGGSAVGLSGKDGRLITAR 133          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_KOSOT (Acetylglutamate kinase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=argB PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.711e-27
Identity = 62/139 (44.60%), Postives = 84/139 (60.43%), Query Frame = 2
Query:  278 VDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGF 694
            V +L E+LP+I++F GKT V+K+GG+AMK    +N                  PV+VHGGG EI+  + + GIEPVF++G R+TD  TMEIV MVLVG+VNK +V  IN  G  A+G+ G DG L  A        +G+
Sbjct:    6 VQVLLEALPYIKEFHGKTFVIKFGGSAMK---NENAKEAFIKDLVLLKYTGINPVIVHGGGSEISSLMNQLGIEPVFKNGYRITDEKTMEIVEMVLVGKVNKDIVMNINLHGGKAIGVCGKDGELLLAEKETKYGDIGY 141          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PELTS (Acetylglutamate kinase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=argB PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.847e-27
Identity = 70/134 (52.24%), Postives = 83/134 (61.94%), Query Frame = 2
Query:  260 TPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTA 661
            TP E +  +L E+LP+I+KF GKTIV+KYGG AM     D+                  PV+VHGGGPEI   LKR G +  F  GLRVTD  TMEIV MVLVG++NK +VS IN+ G  AVGLSG D  LF A
Sbjct:    3 TPWE-KAAVLVEALPYIKKFYGKTIVIKYGGHAMLD---DSLKEAVLTDAVLMKYVGMHPVIVHGGGPEITEMLKRVGKDSRFVGGLRVTDGETMEIVEMVLVGKINKGIVSRINRIGGLAVGLSGKDAGLFQA 132          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_HELMI (Acetylglutamate kinase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=argB PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.847e-27
Identity = 65/130 (50.00%), Postives = 81/130 (62.31%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +  IL E+LP+I+KF GKT+V+KYGGAAM     D                   PV+VHGGGPEIN  L R G++  F  GLRVTD +TME+V MVL G+VNK +V+LI + G  AVGL G DG L  A+
Sbjct:    7 KAGILVEALPYIKKFSGKTVVIKYGGAAMV---NDQLKEAVIMDVILMKLVGIHPVVVHGGGPEINGMLDRLGLKSHFIQGLRVTDESTMEVVEMVLAGKVNKEIVALIQRFGGKAVGLCGKDGGLIQAK 133          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_DESHD (Acetylglutamate kinase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=argB PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.330e-27
Identity = 69/141 (48.94%), Postives = 86/141 (60.99%), Query Frame = 2
Query:  260 TPAEFRVD---ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSP 673
            TP +  +D   +L E+LP+IQKF GKT+V+KYGG AM    + +                 RPV+VHGGGPEIN  L R G E  F  GLRVTD  TMEI SMVLVG++N  ++SL+N+ G  AVGLSG D +L  A   P
Sbjct:    2 TPLDKGLDKARVLIEALPYIQKFAGKTVVIKYGGHAML---EQDLKEKVMLDILLLHSVGIRPVVVHGGGPEINSMLTRVGKESHFVRGLRVTDKETMEIASMVLVGKLNTEIISLLNRFGGRAVGLSGKDAQLLQAVKKP 139          
The following BLAST results are available for this feature:
BLAST of CN188879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 422
Match NameE-valueIdentityDescription
ARGB_THENN1.275e-2746.04Acetylglutamate kinase OS=Thermotoga neapolitana (... [more]
ARGB_HYPNA1.275e-2747.22Acetylglutamate kinase OS=Hyphomonas neptunium (st... [more]
ARGB_THESQ2.841e-2743.88Acetylglutamate kinase OS=Thermotoga sp. (strain R... [more]
ARGB_THEP12.841e-2743.88Acetylglutamate kinase OS=Thermotoga petrophila (s... [more]
ARGB_THEMA2.841e-2743.88Acetylglutamate kinase OS=Thermotoga maritima GN=a... [more]
ARGB_DESMR2.841e-2750.00Acetylglutamate kinase OS=Desulfovibrio magneticus... [more]
ARGB_KOSOT3.711e-2744.60Acetylglutamate kinase OS=Kosmotoga olearia (strai... [more]
ARGB_PELTS4.847e-2752.24Acetylglutamate kinase OS=Pelotomaculum thermoprop... [more]
ARGB_HELMI4.847e-2750.00Acetylglutamate kinase OS=Heliobacterium modestica... [more]
ARGB_DESHD6.330e-2748.94Acetylglutamate kinase OS=Desulfitobacterium hafni... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006P04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006P04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188879 ID=CN188879; Name=CN188879; organism=Citrus sinensis; type=EST; length=696bp
CATTAATCTCTCTGATCTCTGAACCCAAGCAATATCTGCGGAGAATATGG
CCGCCGCCGCCGCTGCCTCCCTAGAAATTGCTCCTTTTTTACAGTCACAG
CTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCAGTCTCCCTCCGTCTT
CAAAATCAAAACCCCACATGTCGAGAATTTCGCTTCGAACCACCGCACCG
AAATAACAAAATCATCCCGCTCTCTCACATCAGCAGCAACAGCCGTAACT
GACACACAGACCCCAGCCGAGTTCCGTGTCGACATTCTTTCCGAATCTCT
TCCCTTCATTCAGAAATTCCGCGGAAAGACCATCGTCGTCAAATACGGCG
GCGCCGCCATGAAACCCAACCAAAAGGACAACCTCCTCGCCTCCGTCGTA
AAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCGTCCTGTCTTGGTCCA
CGGCGGCGGTCCTGAGATCAATTTCTGGCTCAAACGTTTCGGAATCGAGC
CCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCCAACACTATGGAGATC
GTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAGCTTGGTTTCTCTCAT
CAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGGGCATGGACGGGCGCC
TCTTCACGGCCCGGCCCAGCCCAAACTCCGCTAAACTGGGTTTCGT
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