CN188879

Overview
NameCN188879
Unique NameCN188879
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_STAA8 (Acetylglutamate kinase OS=Staphylococcus aureus (strain NCTC 8325) GN=argB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12
Identity = 45/113 (39.82%), Postives = 60/113 (53.10%), Query Frame = 2
Query:  326 KTIVVKYGGAA---MKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLF 655
            K IV+K GG+    M P+  +N                  P++VHGGGP IN  L    IEP F +GLRVTD  TM I    L+  VN +LV+  N+   +A+GL G+D +LF
Sbjct:    2 KFIVIKIGGSTLSDMHPSIINNIKHLRSNNIY--------PIIVHGGGPFINEALSNQQIEPHFVNGLRVTDKATMTITKHTLIADVNTALVAQFNQHQCSAIGLCGLDAQLF 106          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_STAA3 (Acetylglutamate kinase OS=Staphylococcus aureus (strain USA300) GN=argB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12
Identity = 45/113 (39.82%), Postives = 60/113 (53.10%), Query Frame = 2
Query:  326 KTIVVKYGGAA---MKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLF 655
            K IV+K GG+    M P+  +N                  P++VHGGGP IN  L    IEP F +GLRVTD  TM I    L+  VN +LV+  N+   +A+GL G+D +LF
Sbjct:    2 KFIVIKIGGSTLSDMHPSIINNIKHLRSNNIY--------PIIVHGGGPFINEALSNQQIEPHFVNGLRVTDKATMTITKHTLIADVNTALVAQFNQHQCSAIGLCGLDAQLF 106          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_STAA2 (Acetylglutamate kinase OS=Staphylococcus aureus (strain JH1) GN=argB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12
Identity = 45/113 (39.82%), Postives = 60/113 (53.10%), Query Frame = 2
Query:  326 KTIVVKYGGAA---MKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLF 655
            K IV+K GG+    M P+  +N                  P++VHGGGP IN  L    IEP F +GLRVTD  TM I    L+  VN +LV+  N+   +A+GL G+D +LF
Sbjct:    2 KFIVIKIGGSTLSDMHPSIINNIKHLRSNNIY--------PIIVHGGGPFINEALSNQQIEPHFVNGLRVTDKATMTITKHTLIADVNTALVAQFNQHQCSAIGLCGLDAQLF 106          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_STAA1 (Acetylglutamate kinase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=argB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12
Identity = 45/113 (39.82%), Postives = 60/113 (53.10%), Query Frame = 2
Query:  326 KTIVVKYGGAA---MKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLF 655
            K IV+K GG+    M P+  +N                  P++VHGGGP IN  L    IEP F +GLRVTD  TM I    L+  VN +LV+  N+   +A+GL G+D +LF
Sbjct:    2 KFIVIKIGGSTLSDMHPSIINNIKHLRSNNIY--------PIIVHGGGPFINEALSNQQIEPHFVNGLRVTDKATMTITKHTLIADVNTALVAQFNQHQCSAIGLCGLDAQLF 106          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_CHLAD (Acetylglutamate kinase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=argB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12
Identity = 39/85 (45.88%), Postives = 52/85 (61.18%), Query Frame = 2
Query:  440 VLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP-SPNSAKLG 691
            VLVHGGG EI+  +++ G+   F DGLRVT    M I+ MV+ G +NK +V+ +  AG  A+GLSG+D  L    P  PN   LG
Sbjct:   35 VLVHGGGKEISAAVEQAGLPVEFVDGLRVTTPEVMAIMQMVVCGSINKRIVTALVNAGVRALGLSGLDIGLLRCEPYRPNGRDLG 119          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_BACSK (Acetylglutamate kinase OS=Bacillus clausii (strain KSM-K16) GN=argB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.281e-11
Identity = 42/122 (34.43%), Postives = 63/122 (51.64%), Query Frame = 2
Query:  329 TIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGF 694
            T+V+K GG+ ++  ++                   + ++VHGGGP IN  L+   +E  F +GLR T A  +      L G++NK LV  + +AG  A+GLSG DG L    P  ++ KLGF
Sbjct:    3 TVVIKIGGSTLEALEEG-----FYEGVVKRASLGDKIMIVHGGGPAINNLLQAMAVESQFVNGLRKTTAEVLTAAETALSGQINKQLVRSLYQAGGKAIGLSGSDGHLLKTIPI-DTDKLGF 118          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_AKKM8 (Acetylglutamate kinase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=argB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.855e-11
Identity = 38/123 (30.89%), Postives = 60/123 (48.78%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMD 643
            +  ++  +LP++Q +R KT ++K+GG+AM   +                     PV+VHGGG  I+  +   G+E  F +GLRVT    + IV   L G +N  LV +    G   VG+ G +
Sbjct:   11 QASVIVGALPYLQAYRDKTFLIKFGGSAMDDAR---LVKKLMRDIVLLEVLGFNPVIVHGGGKAISKAMAEAGLEARFVNGLRVTTPEAISIVERTLSGTINPGLVQMFRDYGGKGVGIPGTE 130          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_BACLD (Acetylglutamate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=argB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11
Identity = 42/113 (37.17%), Postives = 56/113 (49.56%), Query Frame = 2
Query:  323 GKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTA 661
            GKTIV K GG+ ++    +                  +  LVHGGGP+I   LK+  I   F +G R T    +E+  MVL G +NK  V+ + K G  AVG+SG DG L  A
Sbjct:    2 GKTIVFKCGGSVIRELSDE-----FFQNLKDLTESGWKIALVHGGGPDITKMLKKLNIRTEFVNGQRKTTKAVLEVAEMVLSGSINKFFVAELTKHGLPAVGVSGKDGGLLLA 109          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_DEHE1 (Acetylglutamate kinase OS=Dehalococcoides ethenogenes (strain 195) GN=argB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 31/77 (40.26%), Postives = 48/77 (62.34%), Query Frame = 2
Query:  434 RPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +PVL+HGG   ++ W  + G+E    +G RVTD  T+++V+ VL G VNK +V+ +   G  A G+SG+DG   T +
Sbjct:   39 KPVLIHGGASTVSDWSAKLGLETRLVNGERVTDDPTLDVVAAVLTGLVNKEIVAALLDMGVQAAGISGVDGATITGQ 115          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARBL_THET2 (Putative acetylglutamate kinase-like protein OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1541 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 39/80 (48.75%), Postives = 46/80 (57.50%), Query Frame = 2
Query:  440 VLVHGGGPEINFWLKRFGIEPVFRDG-----LRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +LVHGG  E N   +  G  P F         R+TD  T+EI  MV  G VNK LV L+ K GA A+GLSG+DGRLF  R
Sbjct:   32 LLVHGGSAETNKVAEALGHPPRFLTHPGGQVSRLTDRKTLEIFEMVYCGLVNKRLVELLQKEGANAIGLSGLDGRLFVGR 111          
The following BLAST results are available for this feature:
BLAST of CN188879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 422
Match NameE-valueIdentityDescription
ARGB_STAA87.512e-1239.82Acetylglutamate kinase OS=Staphylococcus aureus (s... [more]
ARGB_STAA37.512e-1239.82Acetylglutamate kinase OS=Staphylococcus aureus (s... [more]
ARGB_STAA27.512e-1239.82Acetylglutamate kinase OS=Staphylococcus aureus (s... [more]
ARGB_STAA17.512e-1239.82Acetylglutamate kinase OS=Staphylococcus aureus (s... [more]
ARGB_CHLAD7.512e-1245.88Acetylglutamate kinase OS=Chloroflexus aggregans (... [more]
ARGB_BACSK1.281e-1134.43Acetylglutamate kinase OS=Bacillus clausii (strain... [more]
ARGB_AKKM82.855e-1130.89Acetylglutamate kinase OS=Akkermansia muciniphila ... [more]
ARGB_BACLD3.728e-1137.17Acetylglutamate kinase OS=Bacillus licheniformis (... [more]
ARGB_DEHE14.869e-1140.26Acetylglutamate kinase OS=Dehalococcoides ethenoge... [more]
ARBL_THET24.869e-1148.75Putative acetylglutamate kinase-like protein OS=Th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006P04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006P04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188879 ID=CN188879; Name=CN188879; organism=Citrus sinensis; type=EST; length=696bp
CATTAATCTCTCTGATCTCTGAACCCAAGCAATATCTGCGGAGAATATGG
CCGCCGCCGCCGCTGCCTCCCTAGAAATTGCTCCTTTTTTACAGTCACAG
CTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCAGTCTCCCTCCGTCTT
CAAAATCAAAACCCCACATGTCGAGAATTTCGCTTCGAACCACCGCACCG
AAATAACAAAATCATCCCGCTCTCTCACATCAGCAGCAACAGCCGTAACT
GACACACAGACCCCAGCCGAGTTCCGTGTCGACATTCTTTCCGAATCTCT
TCCCTTCATTCAGAAATTCCGCGGAAAGACCATCGTCGTCAAATACGGCG
GCGCCGCCATGAAACCCAACCAAAAGGACAACCTCCTCGCCTCCGTCGTA
AAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCGTCCTGTCTTGGTCCA
CGGCGGCGGTCCTGAGATCAATTTCTGGCTCAAACGTTTCGGAATCGAGC
CCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCCAACACTATGGAGATC
GTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAGCTTGGTTTCTCTCAT
CAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGGGCATGGACGGGCGCC
TCTTCACGGCCCGGCCCAGCCCAAACTCCGCTAAACTGGGTTTCGT
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