CN188879

Overview
NameCN188879
Unique NameCN188879
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_CHRVO (Acetylglutamate kinase OS=Chromobacterium violaceum GN=argB PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.330e-27
Identity = 68/135 (50.37%), Postives = 83/135 (61.48%), Query Frame = 2
Query:  260 TPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            T A  + +IL+E+LP+I++F GKTIV+KYGG AM     D                   PV+VHGGGP+IN  L R G +  F  G+RVTDA TME+V MVL G VNK +VSLINK G  AVGL+G DG    AR
Sbjct:    3 TDAAEKANILAEALPYIREFAGKTIVIKYGGNAMTD---DALKEGFAKDVVLLKLVGMNPVVVHGGGPQINDLLARVGKQGEFIQGMRVTDAETMEVVEMVLGGLVNKEIVSLINKHGGKAVGLTGKDGHFIRAR 134          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_CALS8 (Acetylglutamate kinase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=argB PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.330e-27
Identity = 62/130 (47.69%), Postives = 82/130 (63.08%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +  IL E+LP+IQK  GKT+V+KYGG AM  ++  N                  P++VHGGGPEIN  LK+  +E  F +GLRVTD  TME+  MVLVG+ NK LVS++N+ G  A+G+ G+DG L  AR
Sbjct:   11 KASILIEALPYIQKLYGKTVVIKYGGNAMINDKLKNWVMEDITLLKYIGV---NPIVVHGGGPEINSVLKKLNVESQFVNGLRVTDMQTMEVAQMVLVGKTNKELVSMLNQKGGKAIGICGIDGNLIQAR 137          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PSEU5 (Acetylglutamate kinase OS=Pseudomonas stutzeri (strain A1501) GN=argB PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.267e-27
Identity = 63/127 (49.61%), Postives = 84/127 (66.14%), Query Frame = 2
Query:  284 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +LSE+LP+I++F GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTD+ TM++V MVL G+VNKS+VSLIN+ G +A+GL+G D  L  AR
Sbjct:   14 VLSEALPYIRRFVGKTLVIKYGGNAM---ESEELKTGFARDIVLMKAVGINPVVVHGGGPQIGDLLKRLNIESHFIDGMRVTDSQTMDVVEMVLGGQVNKSIVSLINQHGGSAIGLTGKDAGLIRAR 137          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_GLUDA (Acetylglutamate kinase OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=argB PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 8.267e-27
Identity = 64/140 (45.71%), Postives = 86/140 (61.43%), Query Frame = 2
Query:  245 VTDTQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +  T   A+ R  +L+++LPF++++ G TIVVKYGG AM  +   N                  PV+VHGGGP+I+  L R  I   F DGLRVTDA  ++++ MVL G+VNK +  LIN+AGA AVG+SG DG L TAR
Sbjct:   17 IVRTMQEAQERAAVLAQALPFLRRYAGDTIVVKYGGHAMVDDSLSNAFGHDIALLKLVGV---NPVIVHGGGPQISAMLTRLQIPSTFVDGLRVTDAAMVDVIEMVLAGKVNKQVAGLINQAGALAVGISGKDGGLITAR 153          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_SYNFM (Acetylglutamate kinase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=argB PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.080e-26
Identity = 65/130 (50.00%), Postives = 82/130 (63.08%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +  IL E+LP+I++F GKT+V+KYGG AM   +                     PV+VHGGGP+I   LKR G E  F  G+RVTDA+TM+IV MVL G++NK +VSLIN+ G  AVGLSG DG L  AR
Sbjct:    4 KAGILIEALPYIRRFYGKTVVIKYGGNAMVAEELKESFAKDIVLMKYIGI---NPVVVHGGGPQIGRMLKRIGKESDFCAGMRVTDADTMDIVEMVLAGKINKEIVSLINRHGGHAVGLSGKDGNLIEAR 130          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PSEE4 (Acetylglutamate kinase OS=Pseudomonas entomophila (strain L48) GN=argB PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.080e-26
Identity = 62/128 (48.44%), Postives = 84/128 (65.62%), Query Frame = 2
Query:  281 DILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            ++LSE+LP+I++F GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTDA TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  AR
Sbjct:   13 EVLSEALPYIRRFVGKTLVIKYGGNAM---ESEELKTGFARDIVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAR 137          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_DESHY (Acetylglutamate kinase OS=Desulfitobacterium hafniense (strain Y51) GN=argB PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.080e-26
Identity = 69/141 (48.94%), Postives = 85/141 (60.28%), Query Frame = 2
Query:  260 TPAEFRVD---ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSP 673
            TP +  +D   +L E+LP+IQKF GKT+V+KYGG AM      +                 RPV+VHGGGPEIN  L R G E  F  GLRVTD  TMEI SMVLVG++N  ++SL+N+ G  AVGLSG D +L  A   P
Sbjct:    2 TPLDKGLDKARVLIEALPYIQKFTGKTVVIKYGGHAMLDQ---DLKEKVMLDILLLHSVGIRPVVVHGGGPEINSMLTRVGKESHFVRGLRVTDKETMEIASMVLVGKLNTEIISLLNRFGGKAVGLSGKDAQLLQAVKKP 139          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_MAGSM (Acetylglutamate kinase OS=Magnetococcus sp. (strain MC-1) GN=argB PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.410e-26
Identity = 61/130 (46.92%), Postives = 81/130 (62.31%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +V +L E+LP++++F GKT V+KYGG AM     ++                  P++VHGGGP+I   +KR G+EP F DGLRVTD +TM +V MVL G+VNK +V+LIN  G  A GLSG DG    AR
Sbjct:    9 KVKVLIEALPYMRRFEGKTFVIKYGGNAMVD---EDLKSAFAQDVILMRQVGINPIIVHGGGPQIGLIMKRMGLEPKFIDGLRVTDEDTMSVVEMVLAGKVNKDIVNLINLNGGRAAGLSGKDGYTIQAR 135          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_DESPS (Acetylglutamate kinase OS=Desulfotalea psychrophila GN=argB PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.410e-26
Identity = 68/150 (45.33%), Postives = 88/150 (58.67%), Query Frame = 2
Query:  245 VTDTQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP-SPNSAKLG 691
            + DT   +  R  +L ESLP++Q+FR KTIV+KYGG AM     +                   P++VHGGGP+IN  L R  I+P +  G+RVTD  TM++V MVLVG+VNK +V LIN  G  AVGLSG DG L  A     N A++G
Sbjct:    1 MNDTVEKSIERAKVLIESLPYMQEFRHKTIVIKYGGHAMVD---EALKKQFALDVILLKQIGINPIIVHGGGPQINNLLDRLDIKPSYVQGMRVTDGETMDVVEMVLVGKVNKEIVGLINHCGGKAVGLSGRDGDLVCAEQLQMNQAQVG 147          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_AZOVD (Acetylglutamate kinase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=argB PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.410e-26
Identity = 62/127 (48.82%), Postives = 83/127 (65.35%), Query Frame = 2
Query:  284 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +LSE+LP+I++F GKT+V+KYGG AM   + D                   PV+VHGGGP+I   LKR  IE  F DG+RVTDA TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  A+
Sbjct:   14 VLSEALPYIRRFVGKTLVIKYGGNAM---ESDELKTGFARDIVLMKAVGIHPVVVHGGGPQIGDLLKRLSIESRFVDGMRVTDAQTMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAGLIRAK 137          
The following BLAST results are available for this feature:
BLAST of CN188879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 422
Match NameE-valueIdentityDescription
ARGB_CHRVO6.330e-2750.37Acetylglutamate kinase OS=Chromobacterium violaceu... [more]
ARGB_CALS86.330e-2747.69Acetylglutamate kinase OS=Caldicellulosiruptor sac... [more]
ARGB_PSEU58.267e-2749.61Acetylglutamate kinase OS=Pseudomonas stutzeri (st... [more]
ARGB_GLUDA8.267e-2745.71Acetylglutamate kinase OS=Gluconacetobacter diazot... [more]
ARGB_SYNFM1.080e-2650.00Acetylglutamate kinase OS=Syntrophobacter fumaroxi... [more]
ARGB_PSEE41.080e-2648.44Acetylglutamate kinase OS=Pseudomonas entomophila ... [more]
ARGB_DESHY1.080e-2648.94Acetylglutamate kinase OS=Desulfitobacterium hafni... [more]
ARGB_MAGSM1.410e-2646.92Acetylglutamate kinase OS=Magnetococcus sp. (strai... [more]
ARGB_DESPS1.410e-2645.33Acetylglutamate kinase OS=Desulfotalea psychrophil... [more]
ARGB_AZOVD1.410e-2648.82Acetylglutamate kinase OS=Azotobacter vinelandii (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006P04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006P04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188879 ID=CN188879; Name=CN188879; organism=Citrus sinensis; type=EST; length=696bp
CATTAATCTCTCTGATCTCTGAACCCAAGCAATATCTGCGGAGAATATGG
CCGCCGCCGCCGCTGCCTCCCTAGAAATTGCTCCTTTTTTACAGTCACAG
CTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCAGTCTCCCTCCGTCTT
CAAAATCAAAACCCCACATGTCGAGAATTTCGCTTCGAACCACCGCACCG
AAATAACAAAATCATCCCGCTCTCTCACATCAGCAGCAACAGCCGTAACT
GACACACAGACCCCAGCCGAGTTCCGTGTCGACATTCTTTCCGAATCTCT
TCCCTTCATTCAGAAATTCCGCGGAAAGACCATCGTCGTCAAATACGGCG
GCGCCGCCATGAAACCCAACCAAAAGGACAACCTCCTCGCCTCCGTCGTA
AAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCGTCCTGTCTTGGTCCA
CGGCGGCGGTCCTGAGATCAATTTCTGGCTCAAACGTTTCGGAATCGAGC
CCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCCAACACTATGGAGATC
GTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAGCTTGGTTTCTCTCAT
CAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGGGCATGGACGGGCGCC
TCTTCACGGCCCGGCCCAGCCCAAACTCCGCTAAACTGGGTTTCGT
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