CN188879

Overview
NameCN188879
Unique NameCN188879
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PSEFS (Acetylglutamate kinase OS=Pseudomonas fluorescens (strain SBW25) GN=argB PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.842e-26
Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 2
Query:  284 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +LSE+LP+I+++ GKT+V+KYGG AM   + D                   PV+VHGGGP+I   LKR  IE  F DG+RVTDA TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  A+
Sbjct:   14 VLSEALPYIRRYVGKTLVIKYGGNAM---ESDELKTGFARDIVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAQTMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAK 137          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_NITMU (Acetylglutamate kinase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=argB PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.842e-26
Identity = 64/137 (46.72%), Postives = 87/137 (63.50%), Query Frame = 2
Query:  254 TQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +Q  ++ +  IL+E+LP+IQ+F GKTIV+KYGG AM    ++N                  PV+VHGGGP+IN  LKR G +  F  G+RVTDA TM++V MVL G +NK +V+LIN+ G  AVGL+G DG    A+
Sbjct:    3 SQPSSQDKAKILAEALPYIQRFHGKTIVIKYGGNAMT---EENLKKCFAHDVALLKVVGMNPVIVHGGGPQINDMLKRVGKQGAFIQGMRVTDAETMDVVEMVL-GLINKEIVNLINQHGGRAVGLTGKDGSFIRAK 135          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_LAWIP (Acetylglutamate kinase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=argB PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.842e-26
Identity = 64/132 (48.48%), Postives = 80/132 (60.61%), Query Frame = 2
Query:  266 AEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTA 661
            A  R  +L ESLP++QKF+GK IV+KYGG AMK                        P++VHGGGP+I   L R  I+  FR+GLRVTD  TM++V MVL G VNK +V+ +N+AGA AVGLSG DG    A
Sbjct:    6 ARLRSHMLIESLPYLQKFQGKVIVIKYGGHAMKDTLLKQSFAQSIALLNLVGI---HPIVVHGGGPQIGNMLSRLNIQSEFREGLRVTDKATMDVVEMVLAGSVNKEIVNQVNQAGAKAVGLSGKDGAFILA 134          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_ANATD (Acetylglutamate kinase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=argB PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.842e-26
Identity = 61/130 (46.92%), Postives = 81/130 (62.31%), Query Frame = 2
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +  IL E+LP+IQK  GKT+V+KYGG AM   +  N                  P++VHGGGP+IN  LK+  +E  F +GLRVTD  TME+  MVLVG+ NK LVS++N+ G  A+G+ G+DG L  AR
Sbjct:   11 KASILIEALPYIQKLYGKTVVIKYGGNAMINEKLKNWVMEDITLLKYIGV---NPIVVHGGGPDINSVLKKLNVESQFVNGLRVTDMQTMEVAQMVLVGKTNKELVSMLNQKGGKAIGICGIDGNLIQAR 137          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_SACD2 (Acetylglutamate kinase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=argB PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 64/137 (46.72%), Postives = 85/137 (62.04%), Query Frame = 2
Query:  254 TQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            TQ  A     +L+E+LP+IQ+F GKTIVVK+GG AM   +  N                  P++VHGGGP+I   LK+  IE  F DG+RVTD+ TM++V MVL G VNK +VSLIN+ G  A+G++G DG L  A+
Sbjct:    3 TQDQALEVAKVLTEALPYIQRFTGKTIVVKFGGNAMTDTELQNSFARDIVLMKLVGM---NPIVVHGGGPQIGDLLKKLNIESSFVDGMRVTDSATMDVVEMVLGGTVNKQIVSLINRNGGQAIGVTGKDGNLIHAK 136          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PSEU2 (Acetylglutamate kinase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=argB PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 2
Query:  284 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +LSE+LP+I++F GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTDA TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  A+
Sbjct:   14 VLSEALPYIRRFVGKTLVIKYGGNAM---ESEELKTGFARDIVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAQTMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAK 137          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PSESM (Acetylglutamate kinase OS=Pseudomonas syringae pv. tomato GN=argB PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 2
Query:  284 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +LSE+LP+I++F GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTDA TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  A+
Sbjct:   14 VLSEALPYIRRFVGKTLVIKYGGNAM---ESEELKTGFARDIVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAQTMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAK 137          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PSEPW (Acetylglutamate kinase OS=Pseudomonas putida (strain W619) GN=argB PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 2
Query:  281 DILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            ++LSE+LP+I++F GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTDA TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  A+
Sbjct:   13 EVLSEALPYIRRFVGKTLVIKYGGNAM---ESEELKTGFARDIVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAK 137          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PSEPK (Acetylglutamate kinase OS=Pseudomonas putida (strain KT2440) GN=argB PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 2
Query:  281 DILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            ++LSE+LP+I++F GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTD+ TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  AR
Sbjct:   13 EVLSEALPYIRRFVGKTLVIKYGGNAM---ESEELKTGFARDIVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDSATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAR 137          
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PSEPG (Acetylglutamate kinase OS=Pseudomonas putida (strain GB-1) GN=argB PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 2
Query:  281 DILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            ++LSE+LP+I++F GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTD+ TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  AR
Sbjct:   13 EVLSEALPYIRRFVGKTLVIKYGGNAM---ESEELKTGFARDIVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDSATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAR 137          
The following BLAST results are available for this feature:
BLAST of CN188879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 422
Match NameE-valueIdentityDescription
ARGB_PSEFS1.842e-2648.03Acetylglutamate kinase OS=Pseudomonas fluorescens ... [more]
ARGB_NITMU1.842e-2646.72Acetylglutamate kinase OS=Nitrosospira multiformis... [more]
ARGB_LAWIP1.842e-2648.48Acetylglutamate kinase OS=Lawsonia intracellularis... [more]
ARGB_ANATD1.842e-2646.92Acetylglutamate kinase OS=Anaerocellum thermophilu... [more]
ARGB_SACD22.405e-2646.72Acetylglutamate kinase OS=Saccharophagus degradans... [more]
ARGB_PSEU22.405e-2648.03Acetylglutamate kinase OS=Pseudomonas syringae pv.... [more]
ARGB_PSESM2.405e-2648.03Acetylglutamate kinase OS=Pseudomonas syringae pv.... [more]
ARGB_PSEPW2.405e-2647.66Acetylglutamate kinase OS=Pseudomonas putida (stra... [more]
ARGB_PSEPK2.405e-2647.66Acetylglutamate kinase OS=Pseudomonas putida (stra... [more]
ARGB_PSEPG2.405e-2647.66Acetylglutamate kinase OS=Pseudomonas putida (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006P04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006P04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188879 ID=CN188879; Name=CN188879; organism=Citrus sinensis; type=EST; length=696bp
CATTAATCTCTCTGATCTCTGAACCCAAGCAATATCTGCGGAGAATATGG
CCGCCGCCGCCGCTGCCTCCCTAGAAATTGCTCCTTTTTTACAGTCACAG
CTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCAGTCTCCCTCCGTCTT
CAAAATCAAAACCCCACATGTCGAGAATTTCGCTTCGAACCACCGCACCG
AAATAACAAAATCATCCCGCTCTCTCACATCAGCAGCAACAGCCGTAACT
GACACACAGACCCCAGCCGAGTTCCGTGTCGACATTCTTTCCGAATCTCT
TCCCTTCATTCAGAAATTCCGCGGAAAGACCATCGTCGTCAAATACGGCG
GCGCCGCCATGAAACCCAACCAAAAGGACAACCTCCTCGCCTCCGTCGTA
AAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCGTCCTGTCTTGGTCCA
CGGCGGCGGTCCTGAGATCAATTTCTGGCTCAAACGTTTCGGAATCGAGC
CCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCCAACACTATGGAGATC
GTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAGCTTGGTTTCTCTCAT
CAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGGGCATGGACGGGCGCC
TCTTCACGGCCCGGCCCAGCCCAAACTCCGCTAAACTGGGTTTCGT
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