CN188879

Overview
NameCN188879
Unique NameCN188879
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PSEP1 (Acetylglutamate kinase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=argB PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 2 
Query:  281 DILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            ++LSE+LP+I++F GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTD+ TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  AR
Sbjct:   13 EVLSEALPYIRRFVGKTLVIKYGGNAM---ESEELKTGFARDIVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDSATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAR 137
[Close]
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PSE14 (Acetylglutamate kinase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=argB PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 2 
Query:  284 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +LSE+LP+I++F GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTDA TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  A+
Sbjct:   14 VLSEALPYIRRFVGKTLVIKYGGNAM---ESEELKTGFARDIVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAQTMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAK 137
[Close]
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_DESVV (Acetylglutamate kinase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=argB PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 63/133 (47.37%), Postives = 85/133 (63.91%), Query Frame = 2 
Query:  266 AEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            A  +  +L ESLP++++F G+T+V+KYGG AMK    +                   PV+VHGGGP+I   L++  I+  FR+GLRVTD  TM++V MVLVG+VNK +V+ +N AGA AVGLSG DG L  AR
Sbjct:    7 ARLQSKVLIESLPYLRQFHGETVVIKYGGHAMKD---EALKKAFALNVALLKLVGINPVIVHGGGPQIGKMLEQLNIQSHFREGLRVTDDATMDVVEMVLVGKVNKEIVNQMNLAGAKAVGLSGKDGMLIRAR 136
[Close]
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_DESVH (Acetylglutamate kinase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=argB PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 63/133 (47.37%), Postives = 85/133 (63.91%), Query Frame = 2 
Query:  266 AEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            A  +  +L ESLP++++F G+T+V+KYGG AMK    +                   PV+VHGGGP+I   L++  I+  FR+GLRVTD  TM++V MVLVG+VNK +V+ +N AGA AVGLSG DG L  AR
Sbjct:    7 ARLQSKVLIESLPYLRQFHGETVVIKYGGHAMKD---EALKKAFALNVALLKLVGINPVIVHGGGPQIGKMLEQLNIQSHFREGLRVTDDATMDVVEMVLVGKVNKEIVNQMNLAGAKAVGLSGKDGMLIRAR 136
[Close]
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_METB6 (Acetylglutamate kinase OS=Methanoregula boonei (strain 6A8) GN=argB PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.142e-26
Identity = 67/131 (51.15%), Postives = 81/131 (61.83%), Query Frame = 2 
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAM-KPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            R D+L E+LP+IQ+F GKTIV+K GG AM  P   +N                 R VLVHGGGPEI   +K  G E VF  GLRVTD  T+EI  MVLVG++NK ++SLI K GA  VGLSG DG +  A+
Sbjct:    4 REDVLMEALPYIQQFHGKTIVIKLGGHAMVDPEVLENAIKDAVLLHYVGI----RVVLVHGGGPEITEKMKALGKESVFVGGLRVTDQETLEIAQMVLVGKINKGIISLIAKCGAKGVGLSGSDGNIILAK 130
[Close]
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_ACIBY (Acetylglutamate kinase OS=Acinetobacter baumannii (strain AYE) GN=argB PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.142e-26
Identity = 63/130 (48.46%), Postives = 84/130 (64.62%), Query Frame = 2 
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +  IL E+LP+IQ+F GKT+VVKYGG AM   + ++                  P++VHGGGP+++ +LK+ G E    DG+RVTD  TME+V MVL G VNKS+V+LINK G  A+GL+G DG L  AR
Sbjct:   11 KAKILIEALPYIQRFSGKTLVVKYGGNAMTDPELESSFARDIVLLKTVGL---NPIVVHGGGPQVDSFLKQLGRESDRIDGMRVTDEATMEVVEMVLGGSVNKSIVNLINKHGGRAIGLTGQDGNLLRAR 137
[Close]
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_ACIBT (Acetylglutamate kinase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=argB PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.142e-26
Identity = 63/130 (48.46%), Postives = 84/130 (64.62%), Query Frame = 2 
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +  IL E+LP+IQ+F GKT+VVKYGG AM   + ++                  P++VHGGGP+++ +LK+ G E    DG+RVTD  TME+V MVL G VNKS+V+LINK G  A+GL+G DG L  AR
Sbjct:   11 KAKILIEALPYIQRFSGKTLVVKYGGNAMTDPELESSFARDIVLLKTVGL---NPIVVHGGGPQVDSFLKQLGRESDRIDGMRVTDEATMEVVEMVLGGSVNKSIVNLINKHGGRAIGLTGQDGNLLRAR 137
[Close]
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_ACIBS (Acetylglutamate kinase OS=Acinetobacter baumannii (strain SDF) GN=argB PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.142e-26
Identity = 63/130 (48.46%), Postives = 84/130 (64.62%), Query Frame = 2 
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +  IL E+LP+IQ+F GKT+VVKYGG AM   + ++                  P++VHGGGP+++ +LK+ G E    DG+RVTD  TME+V MVL G VNKS+V+LINK G  A+GL+G DG L  AR
Sbjct:   11 KAKILIEALPYIQRFSGKTLVVKYGGNAMTDPELESSFARDIVLLKTVGL---NPIVVHGGGPQVDSFLKQLGRESDRIDGMRVTDEATMEVVEMVLGGSVNKSIVNLINKHGGRAIGLTGQDGNLLRAR 137
[Close]
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_ACIBC (Acetylglutamate kinase OS=Acinetobacter baumannii (strain ACICU) GN=argB PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.142e-26
Identity = 63/130 (48.46%), Postives = 84/130 (64.62%), Query Frame = 2 
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +  IL E+LP+IQ+F GKT+VVKYGG AM   + ++                  P++VHGGGP+++ +LK+ G E    DG+RVTD  TME+V MVL G VNKS+V+LINK G  A+GL+G DG L  AR
Sbjct:   11 KAKILIEALPYIQRFSGKTLVVKYGGNAMTDPELESSFARDIVLLKTVGL---NPIVVHGGGPQVDSFLKQLGRESDRIDGMRVTDEATMEVVEMVLGGSVNKSIVNLINKHGGRAIGLTGQDGNLLRAR 137
[Close]
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_ACIB5 (Acetylglutamate kinase OS=Acinetobacter baumannii (strain AB0057) GN=argB PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.142e-26
Identity = 63/130 (48.46%), Postives = 84/130 (64.62%), Query Frame = 2 
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +  IL E+LP+IQ+F GKT+VVKYGG AM   + ++                  P++VHGGGP+++ +LK+ G E    DG+RVTD  TME+V MVL G VNKS+V+LINK G  A+GL+G DG L  AR
Sbjct:   11 KAKILIEALPYIQRFSGKTLVVKYGGNAMTDPELESSFARDIVLLKTVGL---NPIVVHGGGPQVDSFLKQLGRESDRIDGMRVTDEATMEVVEMVLGGSVNKSIVNLINKHGGRAIGLTGQDGNLLRAR 137
The following BLAST results are available for this feature:
BLAST of CN188879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 422
Match NameE-valueIdentityDescription
ARGB_PSEP12.405e-2647.66Acetylglutamate kinase OS=Pseudomonas putida (stra... [more]
ARGB_PSE142.405e-2648.03Acetylglutamate kinase OS=Pseudomonas syringae pv.... [more]
ARGB_DESVV2.405e-2647.37Acetylglutamate kinase OS=Desulfovibrio vulgaris s... [more]
ARGB_DESVH2.405e-2647.37Acetylglutamate kinase OS=Desulfovibrio vulgaris (... [more]
ARGB_METB63.142e-2651.15Acetylglutamate kinase OS=Methanoregula boonei (st... [more]
ARGB_ACIBY3.142e-2648.46Acetylglutamate kinase OS=Acinetobacter baumannii ... [more]
ARGB_ACIBT3.142e-2648.46Acetylglutamate kinase OS=Acinetobacter baumannii ... [more]
ARGB_ACIBS3.142e-2648.46Acetylglutamate kinase OS=Acinetobacter baumannii ... [more]
ARGB_ACIBC3.142e-2648.46Acetylglutamate kinase OS=Acinetobacter baumannii ... [more]
ARGB_ACIB53.142e-2648.46Acetylglutamate kinase OS=Acinetobacter baumannii ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006P04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006P04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188879 ID=CN188879; Name=CN188879; organism=Citrus sinensis; type=EST; length=696bp
CATTAATCTCTCTGATCTCTGAACCCAAGCAATATCTGCGGAGAATATGG
CCGCCGCCGCCGCTGCCTCCCTAGAAATTGCTCCTTTTTTACAGTCACAG
CTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCAGTCTCCCTCCGTCTT
CAAAATCAAAACCCCACATGTCGAGAATTTCGCTTCGAACCACCGCACCG
AAATAACAAAATCATCCCGCTCTCTCACATCAGCAGCAACAGCCGTAACT
GACACACAGACCCCAGCCGAGTTCCGTGTCGACATTCTTTCCGAATCTCT
TCCCTTCATTCAGAAATTCCGCGGAAAGACCATCGTCGTCAAATACGGCG
GCGCCGCCATGAAACCCAACCAAAAGGACAACCTCCTCGCCTCCGTCGTA
AAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCGTCCTGTCTTGGTCCA
CGGCGGCGGTCCTGAGATCAATTTCTGGCTCAAACGTTTCGGAATCGAGC
CCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCCAACACTATGGAGATC
GTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAGCTTGGTTTCTCTCAT
CAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGGGCATGGACGGGCGCC
TCTTCACGGCCCGGCCCAGCCCAAACTCCGCTAAACTGGGTTTCGT
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