CN188879

Overview
NameCN188879
Unique NameCN188879
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_ACIB3 (Acetylglutamate kinase OS=Acinetobacter baumannii (strain AB307-0294) GN=argB PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.142e-26
Identity = 63/130 (48.46%), Postives = 84/130 (64.62%), Query Frame = 2 
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +  IL E+LP+IQ+F GKT+VVKYGG AM   + ++                  P++VHGGGP+++ +LK+ G E    DG+RVTD  TME+V MVL G VNKS+V+LINK G  A+GL+G DG L  AR
Sbjct:   11 KAKILIEALPYIQRFSGKTLVVKYGGNAMTDPELESSFARDIVLLKTVGL---NPIVVHGGGPQVDSFLKQLGRESDRIDGMRVTDEATMEVVEMVLGGSVNKSIVNLINKHGGRAIGLTGQDGNLLRAR 137
[Close]
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PSEAE (Acetylglutamate kinase OS=Pseudomonas aeruginosa GN=argB PE=1 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 4.103e-26
Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 2 
Query:  284 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +LSE+LP+I++F GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTDA TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  A+
Sbjct:   14 VLSEALPYIRRFVGKTLVIKYGGNAM---ESEELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAK 137
[Close]
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PSEAB (Acetylglutamate kinase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=argB PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.103e-26
Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 2 
Query:  284 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +LSE+LP+I++F GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTDA TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  A+
Sbjct:   14 VLSEALPYIRRFVGKTLVIKYGGNAM---ESEELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAK 137
[Close]
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PSEA8 (Acetylglutamate kinase OS=Pseudomonas aeruginosa (strain LESB58) GN=argB PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.103e-26
Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 2 
Query:  284 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +LSE+LP+I++F GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTDA TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  A+
Sbjct:   14 VLSEALPYIRRFVGKTLVIKYGGNAM---ESEELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAK 137
[Close]
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PSEA7 (Acetylglutamate kinase OS=Pseudomonas aeruginosa (strain PA7) GN=argB PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.103e-26
Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 2 
Query:  284 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +LSE+LP+I++F GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTDA TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  A+
Sbjct:   14 VLSEALPYIRRFVGKTLVIKYGGNAM---ESEELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAK 137
[Close]
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_NITEC (Acetylglutamate kinase OS=Nitrosomonas eutropha (strain C91) GN=argB PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.103e-26
Identity = 62/130 (47.69%), Postives = 84/130 (64.62%), Query Frame = 2 
Query:  275 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +V+IL+E+LP+I++F  KTIV+KYGG AM    ++                   PV+VHGGGP+I+  LKR G E VF  G+RVTDA TM+IV M+L G +NK +V+LIN+ G  AVGL+G DG    A+
Sbjct:   10 KVEILAEALPYIRRFHNKTIVIKYGGNAMT---EEILKQSFAKDVVLLKLVGMNPVIVHGGGPQIDSMLKRVGKEGVFIQGMRVTDAETMDIVEMILGGLINKEIVNLINRHGGQAVGLTGKDGMFIRAK 136
[Close]
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PSEPF (Acetylglutamate kinase OS=Pseudomonas fluorescens (strain Pf0-1) GN=argB PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.359e-26
Identity = 61/127 (48.03%), Postives = 84/127 (66.14%), Query Frame = 2 
Query:  284 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +LSE+LP+I+++ GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTDA TM++V MVL G+VNKS+V+LIN+ G +A+GL+G D  L  A+
Sbjct:   14 VLSEALPYIRRYVGKTLVIKYGGNAM---ESEELKTGFARDIVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFVDGMRVTDAATMDVVEMVLGGQVNKSIVNLINRHGGSAIGLTGKDAGLIRAK 137
[Close]
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_PSEF5 (Acetylglutamate kinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=argB PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.359e-26
Identity = 60/127 (47.24%), Postives = 83/127 (65.35%), Query Frame = 2 
Query:  284 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +LSE+LP+I+++ GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTDA TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  A+
Sbjct:   14 VLSEALPYIRRYVGKTLVIKYGGNAM---ESEELKTGFARDIVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFVDGMRVTDAQTMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAK 137
[Close]
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_MARAV (Acetylglutamate kinase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=argB PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.359e-26
Identity = 61/127 (48.03%), Postives = 81/127 (63.78%), Query Frame = 2 
Query:  284 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            +LS  LP+IQ+F GKT+V+KYGG AM   + ++                  P++VHGGGP+I   L+R  I+  F +G+RVTDA TM++V MVL G+VNK +VSLIN  G TAVGL+G D  L  AR
Sbjct:    6 VLSRGLPYIQRFTGKTVVIKYGGNAM---ENEDLKSSFARDVVLMKLVGINPIVVHGGGPQIGELLERLNIQSRFVNGMRVTDAETMDVVEMVLGGQVNKEIVSLINAHGGTAVGLTGKDANLIRAR 129
[Close]
BLAST of CN188879 vs. ExPASy Swiss-Prot
Match: ARGB_DESDG (Acetylglutamate kinase OS=Desulfovibrio desulfuricans (strain G20) GN=argB PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.359e-26
Identity = 62/131 (47.33%), Postives = 85/131 (64.89%), Query Frame = 2 
Query:  272 FRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR 664
            F+  +L ESLP+ ++F G+T+V+KYGG AM     ++                  PV+VHGGGP+I   L++  I   FR+GLRVTD  TM++V MVLVG+VNK +V+L+N +GA AVGLSG DG+L  AR
Sbjct:    6 FKSKVLIESLPYFRQFSGETVVIKYGGNAMID---ESLKQAFALNIVLLKYVGVNPVVVHGGGPQIGRMLQQLNIPTNFREGLRVTDDATMDVVEMVLVGKVNKQIVNLLNLSGAKAVGLSGKDGQLIRAR 133
The following BLAST results are available for this feature:
BLAST of CN188879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 422
Match NameE-valueIdentityDescription
ARGB_ACIB33.142e-2648.46Acetylglutamate kinase OS=Acinetobacter baumannii ... [more]
ARGB_PSEAE4.103e-2648.03Acetylglutamate kinase OS=Pseudomonas aeruginosa G... [more]
ARGB_PSEAB4.103e-2648.03Acetylglutamate kinase OS=Pseudomonas aeruginosa (... [more]
ARGB_PSEA84.103e-2648.03Acetylglutamate kinase OS=Pseudomonas aeruginosa (... [more]
ARGB_PSEA74.103e-2648.03Acetylglutamate kinase OS=Pseudomonas aeruginosa (... [more]
ARGB_NITEC4.103e-2647.69Acetylglutamate kinase OS=Nitrosomonas eutropha (s... [more]
ARGB_PSEPF5.359e-2648.03Acetylglutamate kinase OS=Pseudomonas fluorescens ... [more]
ARGB_PSEF55.359e-2647.24Acetylglutamate kinase OS=Pseudomonas fluorescens ... [more]
ARGB_MARAV5.359e-2648.03Acetylglutamate kinase OS=Marinobacter aquaeolei (... [more]
ARGB_DESDG5.359e-2647.33Acetylglutamate kinase OS=Desulfovibrio desulfuric... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006P04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006P04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188879 ID=CN188879; Name=CN188879; organism=Citrus sinensis; type=EST; length=696bp
CATTAATCTCTCTGATCTCTGAACCCAAGCAATATCTGCGGAGAATATGG
CCGCCGCCGCCGCTGCCTCCCTAGAAATTGCTCCTTTTTTACAGTCACAG
CTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCAGTCTCCCTCCGTCTT
CAAAATCAAAACCCCACATGTCGAGAATTTCGCTTCGAACCACCGCACCG
AAATAACAAAATCATCCCGCTCTCTCACATCAGCAGCAACAGCCGTAACT
GACACACAGACCCCAGCCGAGTTCCGTGTCGACATTCTTTCCGAATCTCT
TCCCTTCATTCAGAAATTCCGCGGAAAGACCATCGTCGTCAAATACGGCG
GCGCCGCCATGAAACCCAACCAAAAGGACAACCTCCTCGCCTCCGTCGTA
AAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCGTCCTGTCTTGGTCCA
CGGCGGCGGTCCTGAGATCAATTTCTGGCTCAAACGTTTCGGAATCGAGC
CCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCCAACACTATGGAGATC
GTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAGCTTGGTTTCTCTCAT
CAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGGGCATGGACGGGCGCC
TCTTCACGGCCCGGCCCAGCCCAAACTCCGCTAAACTGGGTTTCGT
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