CN188878

Overview
NameCN188878
Unique NameCN188878
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_KOSOT (Acetylglutamate kinase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=argB PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.067e-41
Identity = 95/210 (45.24%), Postives = 128/210 (60.95%), Query Frame = -3
Query:  129 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMI 758
            + GIEPVF++G R+TD  TMEIV MVLVG+VNK +V  IN  G  A+G+ G DG L  A        +G+VG+V +VD T+I+ L+  G+IPVIA +   E G SYNINAD V               LTDV G+ ++ +    L+  +  K  + +IE   V GGMIPK+ C I ++  GV++  II+G VEH+LLLEI +  G GTMI
Sbjct:   72 QLGIEPVFKNGYRITDEKTMEIVEMVLVGKVNKDIVMNINLHGGKAIGVCGKDGELLLAEKETKYGDIGYVGKVKKVDTTLIKGLLVEGYIPVIAPIGFGEDGTSYNINADIVAAEIAKSLEVEKLVLLTDVDGVFKDGK----LLPILSSKEAEDLIEKNIVKGGMIPKLQCAISAVNSGVKSVHIINGGVEHALLLEIFSKEGIGTMI 277          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_THEP1 (Acetylglutamate kinase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=argB PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.394e-41
Identity = 92/211 (43.60%), Postives = 125/211 (59.24%), Query Frame = -3
Query:  129 KRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMI 761
            K  GIEPVF++G RVTD  TMEIV MVLVG++NK +V  +N  G  AVG+ G D +L  A        +G+VG+V +V+P ++  L+ + +IPVIA V   E G SYNINADT                LTDV G+L+  +    L+  +     + +I DG V GGMIPKV C + ++  GV    II+G +EH++LLEI +  G GTMI
Sbjct:   71 KDLGIEPVFKNGHRVTDEKTMEIVEMVLVGKINKEIVMNLNLHGGRAVGICGKDSKLIVAEKETKHGDIGYVGKVKKVNPEILHALIENDYIPVIAPVGIGEDGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLKGDK----LISTLTPDEAEDLIRDGTVTGGMIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMI 277          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_AGRT5 (Acetylglutamate kinase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=argB PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.394e-41
Identity = 99/221 (44.80%), Postives = 132/221 (59.73%), Query Frame = -3
Query:  129 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR--------PSPNSAK---LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMI 758
            + GIE  F  GLRVTDA T+EIV MVL G +NK +V+LIN+ G  A+GL G DG +  A         P  N  +   LGFVGEV  VD T+++ L  S  IPVIA VA    G +YNINADT                LTDV G+L+  ++   L+KE+ +   + +I+DG + GGMIPKV  CI ++  GV+   I++G+  HS+LLEI T+ GAGT+I
Sbjct:   76 KMGIESKFEGGLRVTDAKTVEIVEMVLAGSINKEIVALINQTGEWAIGLCGKDGNMVFAEKAKKTVIDPDSNIERVLDLGFVGEVVEVDRTLLDLLAKSEMIPVIAPVAPGRDGATYNINADTFAGAIAGALHATRLLFLTDVPGVLDKNKE---LIKELTVSEARALIKDGTISGGMIPKVETCIDAIKAGVQGVVILNGKTPHSVLLEIFTE-GAGTLI 292          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_SYNFM (Acetylglutamate kinase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=argB PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.820e-41
Identity = 98/222 (44.14%), Postives = 127/222 (57.21%), Query Frame = -3
Query:  129 KRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR-----------PSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMI 761
            KR G E  F  G+RVTDA+TM+IV MVL G++NK +VSLIN+ G  AVGLSG DG L  AR             P    +G VGEV RV+ ++++ L     IPVIA V   E G++YNINAD V               +TDV G+L+      +L+  + +      ++D  + GGMIPKV C I +L  GV    I+DGRV H++LLEI TDAG GT I
Sbjct:   70 KRIGKESDFCAGMRVTDADTMDIVEMVLAGKINKEIVSLINRHGGHAVGLSGKDGNLIEARKLHVYRYKGDDQPPEIIDIGLVGEVNRVNVSILDTLAGGNLIPVIAPVGVGEQGETYNINADLVAGHIAGALQAAKLVLMTDVEGVLDGGG---NLISSLTVAEAADALQDETLKGGMIPKVQCAIDALQSGVDKVHIVDGRVPHAILLEIFTDAGVGTEI 288          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_RHILW (Acetylglutamate kinase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=argB PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.820e-41
Identity = 97/221 (43.89%), Postives = 127/221 (57.47%), Query Frame = -3
Query:  129 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAK-----------LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMI 758
            + GIE  F  GLRVTD  T+EIV MVL G +NK +V+LIN+ G  A+GL G DG +  A  +  + K           LGFVGEV  VD T+++ L  S  IPVIA VA    G +YNINADT                LTDVAG+L+       L+KE+ +     +I DG + GGMIPKV  CI ++  GV+   I++G+  HS+LLEI T+ G GT+I
Sbjct:   76 KMGIESKFEGGLRVTDQKTVEIVEMVLAGSINKEIVALINQTGEWAIGLCGKDGNMVFAEKARKTVKDPDSNIERVLDLGFVGEVVEVDRTLLDLLARSEMIPVIAPVAPGRDGATYNINADTFAGAIAGALNATRLLFLTDVAGVLDKNG---QLIKELSVAEAHALIADGTISGGMIPKVETCIDAIKAGVQGVVILNGKTAHSVLLEIFTEHGIGTLI 293          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_MARAV (Acetylglutamate kinase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=argB PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.820e-41
Identity = 100/223 (44.84%), Postives = 133/223 (59.64%), Query Frame = -3
Query:  126 KRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP-----------SPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMIT 761
            +R  I+  F +G+RVTDA TM++V MVL G+VNK +VSLIN  G TAVGL+G D  L  AR             P    +G VGEVA V+  VI+ L  S  IPVIA +     G SYNINAD V               LT+V+G L+++ED   ++  +  + V  +IEDG + GGM+PK+ C + ++  GVRT+ IIDGRV H+ LLEI TD G GT+I+
Sbjct:   69 ERLNIQSRFVNGMRVTDAETMDVVEMVLGGQVNKEIVSLINAHGGTAVGLTGKDANLIRARKLEVVNRSPELERPEIIDIGHVGEVASVNVDVIDMLTRSNVIPVIAPIGVGPDGASYNINADLVAGKVAEAMKAEKLILLTNVSG-LKSKED--KVLTGLTAQQVNDLIEDGTIHGGMLPKIRCALSAVENGVRTSHIIDGRVAHACLLEIFTDEGVGTLIS 288          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_MAGSM (Acetylglutamate kinase OS=Magnetococcus sp. (strain MC-1) GN=argB PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.820e-41
Identity = 98/222 (44.14%), Postives = 129/222 (58.11%), Query Frame = -3
Query:  129 KRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPS-----------PNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMI 761
            KR G+EP F DGLRVTD +TM +V MVL G+VNK +V+LIN  G  A GLSG DG    AR             P    LG+VG+V R++  +++    S  IPV+A V     G++YNINAD+V               LTDV G+ +      +L+ +ID   V K+I +G V GGMIPK+  C  +   GV  + IIDGRVEH+LLLEI TD+G GT++
Sbjct:   75 KRMGLEPKFIDGLRVTDEDTMSVVEMVLAGKVNKDIVNLINLNGGRAAGLSGKDGYTIQARKRTHVRKGPDVQVPEIIDLGWVGDVERIETNLLDRFRASDIIPVVAPVGVGANGETYNINADSVAGHIAIAMQAEKLILLTDVPGVQDKNG---TLINQIDETDVDKLIRNGTVTGGMIPKLETCRTAHTGGVNASHIIDGRVEHALLLEIFTDSGIGTVL 293          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_GLUOX (Acetylglutamate kinase OS=Gluconobacter oxydans GN=argB PE=3 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.820e-41
Identity = 95/221 (42.99%), Postives = 128/221 (57.92%), Query Frame = -3
Query:  129 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAK-----------LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMI 758
            R  I   F DGLRVTD + ++++ MVL G VNK +  LIN+AGA AVG+SG DG L  AR    + +           LGFVG+  ++DP V+  L+ +G IPVIA V   E G++YNINADT                LTDV G+L+       L++E+      + I DG + GGMIPKV  C+ ++ +G + A I+DGRV HS LLE+ T AG GT+I
Sbjct:   76 RLKIRSEFIDGLRVTDKSMVDVIEMVLSGSVNKQVTQLINRAGALAVGISGKDGGLIQARRLTRTKRDPDSEIEKVIDLGFVGQPEKIDPRVLYALLGAGLIPVIAPVGVGEDGETYNINADTAAGAIAGAVHASRLLMLTDVPGVLDENG---KLIEELSADEAMRRIADGSISGGMIPKVETCLEAVRKGAKAAVILDGRVPHSCLLELFTRAGPGTLI 293          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_AGRRK (Acetylglutamate kinase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=argB PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.820e-41
Identity = 97/221 (43.89%), Postives = 128/221 (57.92%), Query Frame = -3
Query:  129 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAK-----------LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMI 758
            + GIE  F  GLRVTD  T+EIV MVL G +NK +V+LIN+ G  A+GL G DG +  A  +  + K           LGFVGEV  VD T+++ L  S  IPVIA VA    G +YNINADT                LTDV G+L+ +     L+KE+ +     +I DG + GGMIPKV  CI ++  GV+   I++G+  HS+LLEI T+ GAGT+I
Sbjct:   76 KMGIESKFEGGLRVTDQKTVEIVEMVLAGSINKEIVALINQTGEWAIGLCGKDGNMVFAEKAHKTIKDPDSNIERVLDLGFVGEVVEVDRTLLDLLAKSEMIPVIAPVAPGRDGATYNINADTFAGAIAGALSATRLLFLTDVPGVLDKQGQ---LIKELSVAQAHALIADGTISGGMIPKVETCIDAIKAGVQGVVILNGKTAHSVLLEIFTEHGAGTLI 293          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_NOVAD (Acetylglutamate kinase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=argB PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.378e-41
Identity = 95/227 (41.85%), Postives = 129/227 (56.83%), Query Frame = -3
Query:  129 KRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP----------------SPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMI 761
            K  GIE  F DGLRVTD  T E+  MVL G +NK LVS I +AG  A+G+SG DG +  AR                  P    LGFVGE  R+D TVI+ +  +G IPVIA +   E G++YNINADT+               LTDV G+L+  ++ ++ ++  DI    ++ EDG + GGMIPK+  C+ ++  G     ++DGRV H++LLEI T  GAGT+I
Sbjct:   78 KALGIESRFVDGLRVTDKQTAEVAEMVLAGAINKELVSWIARAGGKAIGISGKDGGMVIARKVEAKKAPKAVADAESGDPIVVDLGFVGEPDRIDTTVIDTICKAGMIPVIAPIGVGEDGETYNINADTMAGSIAAALGAARLFLLTDVPGVLDKDKNLLTDLRPADI---ARLAEDGTISGGMIPKLETCVHAVEAGCEATVVLDGRVPHAMLLEIFTARGAGTLI 301          
The following BLAST results are available for this feature:
BLAST of CN188878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_KOSOT1.067e-4145.24Acetylglutamate kinase OS=Kosmotoga olearia (strai... [more]
ARGB_THEP11.394e-4143.60Acetylglutamate kinase OS=Thermotoga petrophila (s... [more]
ARGB_AGRT51.394e-4144.80Acetylglutamate kinase OS=Agrobacterium tumefacien... [more]
ARGB_SYNFM1.820e-4144.14Acetylglutamate kinase OS=Syntrophobacter fumaroxi... [more]
ARGB_RHILW1.820e-4143.89Acetylglutamate kinase OS=Rhizobium leguminosarum ... [more]
ARGB_MARAV1.820e-4144.84Acetylglutamate kinase OS=Marinobacter aquaeolei (... [more]
ARGB_MAGSM1.820e-4144.14Acetylglutamate kinase OS=Magnetococcus sp. (strai... [more]
ARGB_GLUOX1.820e-4142.99Acetylglutamate kinase OS=Gluconobacter oxydans GN... [more]
ARGB_AGRRK1.820e-4143.89Acetylglutamate kinase OS=Agrobacterium radiobacte... [more]
ARGB_NOVAD2.378e-4141.85Acetylglutamate kinase OS=Novosphingobium aromatic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006P04_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006P04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188878 ID=CN188878; Name=CN188878; organism=Citrus sinensis; type=EST; length=763bp
CCTTTTTTTTTTTTTTTACAGTCCATCAATTTTGTTTATTTTTCAATAGC
CCCTTTAAGAAGTAAAAGAAAAAAAATAATTTAGGAATTAAGACGAGGAT
TAGAATTAGGTTTGATTAGCTAGCCAGTGATCATGGTACCGGCACCAGCA
TCAGTCAAAATCTCAAGAAGCAAGGAGTGTTCAACTCTTCCATCAATAAT
ACTAGCAGTCCTGACACCTTGAGCAAGTGATCTAATACAGCAATTCACTT
TGGGTATCATCCCACCACCAACTTTGCCATCTTCAATCATCTTTTTCACT
CCCTTGATATCGATCTCCTTCACCAAGCTCATTGGATCCTCTCTGTTCTC
AAGTATCCCCGCTACATCAGTCAACAATATCAGCTTCTCAGCACCCAATG
CCGCCGCCAGTTCCCCAGCCACAGTGTCCGCATTGATGTTATAAGATTGC
CCAAACTCATCCGCAGCCACAGAAGCAATCACTGGTATGTGTCCACTGTT
TACCAGAGGCTCAATGACCGTGGGGTCCACGCGGGCTACTTCACCAACGA
AACCCAGTTTAGCGGAGTTTGGGCTGGGCCGGGCCGTGAAGAGGCGCCCG
TCCATGCCCGAGAGCCCAACCGCGGTGGCGCCGGCTTTGTTGATGAGAGA
AACCAAGCTCTTGTTCACCCTCCCCACCAGAACCATGGACACGATCTCCA
TAGTGTTGGCATCAGTGACGCGGAGGCCGTCACGGAAAACGGGCTCGATT
CCGAAACGTTTGA
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