CN188878

Overview
NameCN188878
Unique NameCN188878
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_METNO (Acetylglutamate kinase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=argB PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 9.035e-41
Identity = 93/221 (42.08%), Postives = 131/221 (59.28%), Query Frame = -3
Query:  129 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR--------PSPNSAK---LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMI 758
            R GI+  FR+GLRVTD  T+E+V MVL G +NK +V  I+  G  A+GL G DG +  AR        P  N  +   LG VGE  RV+  V++ ++ +  IPV+A VA    GQ+YN+NADT                LTDV G+L+  +    L+ E+ I+  +++I DG + GGMIPK+  CI ++ QGV    I+DG+V H++LLE+ TD GAGT+I
Sbjct:   82 RLGIKSEFREGLRVTDEATVEVVEMVLAGSINKQIVGWISAEGGKAIGLCGKDGNMVQARRATRTVVDPDSNIERHVDLGLVGEPERVNRAVLDAVLKAELIPVLAPVAVGSDGQTYNVNADTFAGAIAGALRAKRLLLLTDVPGVLDKDK---KLIPELSIEDCRRLIADGTITGGMIPKIETCIYAIEQGVEAVVILDGKVPHAVLLELFTDYGAGTLI 299          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_CELJU (Acetylglutamate kinase OS=Cellvibrio japonicus (strain Ueda107) GN=argB PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 9.035e-41
Identity = 94/223 (42.15%), Postives = 136/223 (60.99%), Query Frame = -3
Query:  126 KRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP-----------SPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMIT 761
            ++  I+  F +G+RVTD+ TM++V MVL G VNK +VSLIN+ G  A+GL+G DG+L  A+            +P    +G VGEV  V+  VI+ L+NS  IPVIA +   E G SYNINAD V               LT+V+G+ + + + ++    +  + V  +I DG + GGM+PK+ C + ++  GV +A IIDGRV+H++LLEI TDAG GT+IT
Sbjct:   77 EKLNIKSEFINGMRVTDSATMDVVEMVLGGTVNKQIVSLINRNGGQAIGLTGKDGQLIRAKKLTVTHKTPEMLAPEILDIGHVGEVQSVNTAVIDMLINSDFIPVIAPIGVGEDGASYNINADLVAGKIAEFLRAEKLMLLTNVSGLQDKQGNVLT---GLSTEQVDALIADGTIYGGMLPKIACALDAVKGGVTSAHIIDGRVDHAVLLEIFTDAGVGTLIT 296          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_GEOSF (Acetylglutamate kinase OS=Geobacter sp. (strain FRC-32) GN=argB PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.180e-40
Identity = 96/221 (43.44%), Postives = 126/221 (57.01%), Query Frame = -3
Query:  129 KRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAK----------LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMI 761
            KR+GI   F  G+RVTD  TM +V MVL G+VNK +V  +N+ G  AVGLSG DG L   +      K          +GFVG+V  VD +++  L   G IPVIA +     G+SYNINAD V               LTDV+G+ +   + +S +   D+ G   +IEDG + GGMIPKV CC  +L  GV  A I+DGR+EH++LLEI T+ G GT I
Sbjct:   73 KRYGIVSQFVKGMRVTDEATMGVVEMVLTGQVNKEVVGYLNQHGGRAVGLSGKDGGLLLCKKLLQEVKNEQGVLETVDIGFVGDVVDVDSSILVTLEAGGFIPVIAPIGVGTGGESYNINADVVAGKVAAALKAEKLILLTDVSGVKDQGGNLLSSIALGDVPG---LIEDGTITGGMIPKVTCCTDALTGGVHKAHIVDGRIEHAILLEIFTNVGIGTEI 290          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_BRUME (Acetylglutamate kinase OS=Brucella melitensis GN=argB PE=3 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 1.180e-40
Identity = 96/221 (43.44%), Postives = 129/221 (58.37%), Query Frame = -3
Query:  129 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR--------PSPNSAK---LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMI 758
            + GIE  F  GLRVTD  T+E+V MVL G +NK +V+LIN  G  A+GL G DG +  A+        P  N  K   LGFVGE A VD T+++ L  S  IPVIA VA    G +YNINADT                LT+V G+L+  +    L+KE+ +   + +I DG + GGMIPKV  CI ++ +GV    I++G+  HS+LLE+ T+ GAGT+I
Sbjct:   77 KLGIESRFEGGLRVTDEKTVEVVEMVLAGSINKEIVALINAEGEWAIGLCGKDGNMVFAQKAHKTVIDPDSNIEKVLDLGFVGEPAEVDRTLLDLLARSEMIPVIAPVAPGRDGHTYNINADTFAGAIAGALAATRLLFLTNVPGVLDKDK---KLIKELSVADAQALIRDGTISGGMIPKVETCIDAIRRGVEGVVILNGKTPHSVLLELFTEHGAGTLI 294          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_BRUMB (Acetylglutamate kinase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=argB PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.180e-40
Identity = 96/221 (43.44%), Postives = 129/221 (58.37%), Query Frame = -3
Query:  129 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR--------PSPNSAK---LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMI 758
            + GIE  F  GLRVTD  T+E+V MVL G +NK +V+LIN  G  A+GL G DG +  A+        P  N  K   LGFVGE A VD T+++ L  S  IPVIA VA    G +YNINADT                LT+V G+L+  +    L+KE+ +   + +I DG + GGMIPKV  CI ++ +GV    I++G+  HS+LLE+ T+ GAGT+I
Sbjct:   77 KLGIESRFEGGLRVTDEKTVEVVEMVLAGSINKEIVALINAEGEWAIGLCGKDGNMVFAQKAHKTVIDPDSNIEKVLDLGFVGEPAEVDRTLLDLLARSEMIPVIAPVAPGRDGHTYNINADTFAGAIAGALAATRLLFLTNVPGVLDKDK---KLIKELSVADAQALIRDGTISGGMIPKVETCIDAIRRGVEGVVILNGKTPHSVLLELFTEHGAGTLI 294          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_BRUAB (Acetylglutamate kinase OS=Brucella abortus GN=argB PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.180e-40
Identity = 96/221 (43.44%), Postives = 129/221 (58.37%), Query Frame = -3
Query:  129 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR--------PSPNSAK---LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMI 758
            + GIE  F  GLRVTD  T+E+V MVL G +NK +V+LIN  G  A+GL G DG +  A+        P  N  K   LGFVGE A VD T+++ L  S  IPVIA VA    G +YNINADT                LT+V G+L+  +    L+KE+ +   + +I DG + GGMIPKV  CI ++ +GV    I++G+  HS+LLE+ T+ GAGT+I
Sbjct:   77 KLGIESRFEGGLRVTDEKTVEVVEMVLAGSINKEIVALINAEGEWAIGLCGKDGNMVFAQKAHKTVIDPDSNIEKVLDLGFVGEPAEVDRTLLDLLARSEMIPVIAPVAPGRDGHTYNINADTFAGAIAGALAATRLLFLTNVPGVLDKDK---KLIKELSVADAQALIRDGTISGGMIPKVETCIDAIRRGVEGVVILNGKTPHSVLLELFTEHGAGTLI 294          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_BRUA2 (Acetylglutamate kinase OS=Brucella abortus (strain 2308) GN=argB PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.180e-40
Identity = 96/221 (43.44%), Postives = 129/221 (58.37%), Query Frame = -3
Query:  129 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR--------PSPNSAK---LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMI 758
            + GIE  F  GLRVTD  T+E+V MVL G +NK +V+LIN  G  A+GL G DG +  A+        P  N  K   LGFVGE A VD T+++ L  S  IPVIA VA    G +YNINADT                LT+V G+L+  +    L+KE+ +   + +I DG + GGMIPKV  CI ++ +GV    I++G+  HS+LLE+ T+ GAGT+I
Sbjct:   77 KLGIESRFEGGLRVTDEKTVEVVEMVLAGSINKEIVALINAEGEWAIGLCGKDGNMVFAQKAHKTVIDPDSNIEKVLDLGFVGEPAEVDRTLLDLLARSEMIPVIAPVAPGRDGHTYNINADTFAGAIAGALAATRLLFLTNVPGVLDKDK---KLIKELSVADAQALIRDGTISGGMIPKVETCIDAIRRGVEGVVILNGKTPHSVLLELFTEHGAGTLI 294          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_BRUA1 (Acetylglutamate kinase OS=Brucella abortus (strain S19) GN=argB PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.180e-40
Identity = 96/221 (43.44%), Postives = 129/221 (58.37%), Query Frame = -3
Query:  129 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR--------PSPNSAK---LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMI 758
            + GIE  F  GLRVTD  T+E+V MVL G +NK +V+LIN  G  A+GL G DG +  A+        P  N  K   LGFVGE A VD T+++ L  S  IPVIA VA    G +YNINADT                LT+V G+L+  +    L+KE+ +   + +I DG + GGMIPKV  CI ++ +GV    I++G+  HS+LLE+ T+ GAGT+I
Sbjct:   77 KLGIESRFEGGLRVTDEKTVEVVEMVLAGSINKEIVALINAEGEWAIGLCGKDGNMVFAQKAHKTVIDPDSNIEKVLDLGFVGEPAEVDRTLLDLLARSEMIPVIAPVAPGRDGHTYNINADTFAGAIAGALAATRLLFLTNVPGVLDKDK---KLIKELSVADAQALIRDGTISGGMIPKVETCIDAIRRGVEGVVILNGKTPHSVLLELFTEHGAGTLI 294          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_SACD2 (Acetylglutamate kinase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=argB PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.541e-40
Identity = 95/223 (42.60%), Postives = 136/223 (60.99%), Query Frame = -3
Query:  126 KRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAK-----------LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMIT 761
            K+  IE  F DG+RVTD+ TM++V MVL G VNK +VSLIN+ G  A+G++G DG L  A+    + K           +G VGEV  ++ +VI+ LVNS  IPVIA +   + G SYNINAD V               LT+VAG+   ++    ++  +    V ++I DG + GGM+PK++C + ++  GV++A IIDGRV H++LLEI TD+G GT+IT
Sbjct:   76 KKLNIESSFVDGMRVTDSATMDVVEMVLGGTVNKQIVSLINRNGGQAIGVTGKDGNLIHAKKLTVNRKSPEVQASEIIDIGHVGEVKTINRSVIDVLVNSDFIPVIAPIGVGDDGASYNINADLVAGKVAEVLQAEKLMLLTNVAGL---QDKSGQVLTGLTTGRVDELIADGTIYGGMLPKISCALDAVKCGVKSAHIIDGRVPHAVLLEIFTDSGVGTLIT 295          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_LEPIN (Acetylglutamate kinase OS=Leptospira interrogans GN=argB PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.541e-40
Identity = 97/213 (45.54%), Postives = 124/213 (58.22%), Query Frame = -3
Query:  129 FRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKL----------GFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLLLEILTDAGAGTMI 737
            F  G RVTD  TMEIV MVL G+VNK +VSLIN  G  AVG+SG DG L  A  +P   +L          G VG++  V+P ++  L  +G IPVI+ VA +  G+S NINADT                LTD  GIL + +    LV  ++   VK  I  G++ GGMIPKV CC+ ++ QGVR   IIDGRV HS+L+EI TD G G++I
Sbjct:   84 FVHGHRVTDNQTMEIVEMVLTGKVNKQIVSLINSQGGKAVGISGKDGNLAKATKAPIEIELEGKEKQLFDVGLVGKIESVNPEILHNLQKAGFIPVISPVAENSEGESLNINADTFAGEIAGALKAEKLILLTDTQGILIDNQ----LVTGLNRNKVKDYIRKGEISGGMIPKVECCLTAIDQGVRRTHIIDGRVSHSILIEIFTDQGIGSLI 292          
The following BLAST results are available for this feature:
BLAST of CN188878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_METNO9.035e-4142.08Acetylglutamate kinase OS=Methylobacterium nodulan... [more]
ARGB_CELJU9.035e-4142.15Acetylglutamate kinase OS=Cellvibrio japonicus (st... [more]
ARGB_GEOSF1.180e-4043.44Acetylglutamate kinase OS=Geobacter sp. (strain FR... [more]
ARGB_BRUME1.180e-4043.44Acetylglutamate kinase OS=Brucella melitensis GN=a... [more]
ARGB_BRUMB1.180e-4043.44Acetylglutamate kinase OS=Brucella melitensis biot... [more]
ARGB_BRUAB1.180e-4043.44Acetylglutamate kinase OS=Brucella abortus GN=argB... [more]
ARGB_BRUA21.180e-4043.44Acetylglutamate kinase OS=Brucella abortus (strain... [more]
ARGB_BRUA11.180e-4043.44Acetylglutamate kinase OS=Brucella abortus (strain... [more]
ARGB_SACD21.541e-4042.60Acetylglutamate kinase OS=Saccharophagus degradans... [more]
ARGB_LEPIN1.541e-4045.54Acetylglutamate kinase OS=Leptospira interrogans G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006P04_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006P04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188878 ID=CN188878; Name=CN188878; organism=Citrus sinensis; type=EST; length=763bp
CCTTTTTTTTTTTTTTTACAGTCCATCAATTTTGTTTATTTTTCAATAGC
CCCTTTAAGAAGTAAAAGAAAAAAAATAATTTAGGAATTAAGACGAGGAT
TAGAATTAGGTTTGATTAGCTAGCCAGTGATCATGGTACCGGCACCAGCA
TCAGTCAAAATCTCAAGAAGCAAGGAGTGTTCAACTCTTCCATCAATAAT
ACTAGCAGTCCTGACACCTTGAGCAAGTGATCTAATACAGCAATTCACTT
TGGGTATCATCCCACCACCAACTTTGCCATCTTCAATCATCTTTTTCACT
CCCTTGATATCGATCTCCTTCACCAAGCTCATTGGATCCTCTCTGTTCTC
AAGTATCCCCGCTACATCAGTCAACAATATCAGCTTCTCAGCACCCAATG
CCGCCGCCAGTTCCCCAGCCACAGTGTCCGCATTGATGTTATAAGATTGC
CCAAACTCATCCGCAGCCACAGAAGCAATCACTGGTATGTGTCCACTGTT
TACCAGAGGCTCAATGACCGTGGGGTCCACGCGGGCTACTTCACCAACGA
AACCCAGTTTAGCGGAGTTTGGGCTGGGCCGGGCCGTGAAGAGGCGCCCG
TCCATGCCCGAGAGCCCAACCGCGGTGGCGCCGGCTTTGTTGATGAGAGA
AACCAAGCTCTTGTTCACCCTCCCCACCAGAACCATGGACACGATCTCCA
TAGTGTTGGCATCAGTGACGCGGAGGCCGTCACGGAAAACGGGCTCGATT
CCGAAACGTTTGA
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