CN188878

Overview
NameCN188878
Unique NameCN188878
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_EDWI9 (Acetylglutamate kinase OS=Edwardsiella ictaluri (strain 93-146) GN=argB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.478e-14
Identity = 54/177 (30.51%), Postives = 87/177 (49.15%), Query Frame = -3
Query:  228 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRS 758
            R  +  V R GLRVT A+ + I+S  L G  NK+L +     G  A+GLS  DG     + SP  A LG VG+     P ++  L+ +  +P+++S+     G   N+NAD                 L+DV+GIL+ +      + E+  +  +++IE G +  GM+ KVN  + +
Sbjct:   53 RLQLPVVKRQGLRVTPADQIGIISGALAGTANKTLQACAIAHGLAAIGLSLADGG--AVQVSPLDASLGHVGQALPGSPLLLRQLLAADFLPIVSSIGISADGMLLNVNADQA-ATALAATLGADLLMLSDVSGILDGKG---QRIAEMTAQKAQRLIEQGIITDGMVVKVNAALEA 223          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_STRMU (Acetylglutamate kinase OS=Streptococcus mutans GN=argB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.236e-14
Identity = 54/188 (28.72%), Postives = 94/188 (50.00%), Query Frame = -3
Query:  168 DGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCIRSLAQGVRTASIIDGRVEHSLL 731
            +GLRVT  + M +VS  L+  V K+L   + +AG +   L   D +   A    +    G+VG+V  ++  VIE  + +  IP++AS+   + G   NINAD +               +T+V G+LEN     +++++I    V++ I+   +  GMIPK+    +++A GV    I D  +  +L+
Sbjct:   60 NGLRVTSKDDMVLVSHALLDLVGKNLQEKLRQAGVSCQQLKS-DIKHVVAADYLDKDTYGYVGDVTHINKRVIEEFLENRQIPILASLGYSKEGDMLNINADYLATAVAVALAADKLILMTNVKGVLENG----AVLEKITSHQVQEKIDTAVITAGMIPKIESAAKTVAAGVGQVLIGDNLLTGTLI 242          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_SODGM (Acetylglutamate kinase OS=Sodalis glossinidius (strain morsitans) GN=argB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.236e-14
Identity = 56/189 (29.63%), Postives = 95/189 (50.26%), Query Frame = -3
Query:  201 RFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCI---RSLAQGVRTAS 758
            +  +  V ++GLRVT A+ + I++  L G  NK+L++   K    AVGL   DG   +   +P    LG VG      P ++  L+ +G++P+I+S+     G+  N+NAD                 L+D++GIL+ +      + E+  +  +++IE G +  GMI KVN  +   R+L + V  AS
Sbjct:   53 KLSLPVVKKNGLRVTPADQIAIITGALAGTANKTLLAWAKKHAINAVGLCLGDGD--SVNVTPLDPALGHVGRAHPGSPVLLTTLLEAGYLPIISSIGLTHDGELMNVNADQA-ATALAATLGADLILLSDISGILDGKG---QRIAEMTAQKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIAS 235          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_SHISS (Acetylglutamate kinase OS=Shigella sonnei (strain Ss046) GN=argB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.226e-14
Identity = 57/181 (31.49%), Postives = 94/181 (51.93%), Query Frame = -3
Query:  201 RDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCI---RSLAQGVRTAS 734
            ++GLRVT A+ ++I++  L G  NK+L++   K    AVGL   DG   + + +    +LG VG      P +I  L+ +G++PV++S+   + GQ  N+NAD                 L+DV+GIL+ +      + E+     +++IE G +  GMI KVN  +   R+L + V  AS
Sbjct:   62 KNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGD--SVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQA-ATALAATLGADLILLSDVSGILDGKG---QRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIAS 236          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_SHIFL (Acetylglutamate kinase OS=Shigella flexneri GN=argB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.226e-14
Identity = 57/181 (31.49%), Postives = 94/181 (51.93%), Query Frame = -3
Query:  201 RDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCI---RSLAQGVRTAS 734
            ++GLRVT A+ ++I++  L G  NK+L++   K    AVGL   DG   + + +    +LG VG      P +I  L+ +G++PV++S+   + GQ  N+NAD                 L+DV+GIL+ +      + E+     +++IE G +  GMI KVN  +   R+L + V  AS
Sbjct:   62 KNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGD--SVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQA-ATALAATLGADLILLSDVSGILDGKG---QRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIAS 236          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_SHIDS (Acetylglutamate kinase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=argB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.226e-14
Identity = 57/181 (31.49%), Postives = 94/181 (51.93%), Query Frame = -3
Query:  201 RDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCI---RSLAQGVRTAS 734
            ++GLRVT A+ ++I++  L G  NK+L++   K    AVGL   DG   + + +    +LG VG      P +I  L+ +G++PV++S+   + GQ  N+NAD                 L+DV+GIL+ +      + E+     +++IE G +  GMI KVN  +   R+L + V  AS
Sbjct:   62 KNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGD--SVKVTQLDEELGHVGLAQPGSPKLINTLLENGYLPVVSSIGVTDEGQLMNVNADQA-ATALAATLGADLILLSDVSGILDGKG---QRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIAS 236          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_SHIBS (Acetylglutamate kinase OS=Shigella boydii serotype 4 (strain Sb227) GN=argB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.226e-14
Identity = 57/181 (31.49%), Postives = 94/181 (51.93%), Query Frame = -3
Query:  201 RDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCI---RSLAQGVRTAS 734
            ++GLRVT A+ ++I++  L G  NK+L++   K    AVGL   DG   + + +    +LG VG      P +I  L+ +G++PV++S+   + GQ  N+NAD                 L+DV+GIL+ +      + E+     +++IE G +  GMI KVN  +   R+L + V  AS
Sbjct:   62 KNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGD--SVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQA-ATALAATLGADLILLSDVSGILDGKG---QRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIAS 236          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_SHIB3 (Acetylglutamate kinase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=argB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.226e-14
Identity = 57/181 (31.49%), Postives = 94/181 (51.93%), Query Frame = -3
Query:  201 RDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCI---RSLAQGVRTAS 734
            ++GLRVT A+ ++I++  L G  NK+L++   K    AVGL   DG   + + +    +LG VG      P +I  L+ +G++PV++S+   + GQ  N+NAD                 L+DV+GIL+ +      + E+     +++IE G +  GMI KVN  +   R+L + V  AS
Sbjct:   61 KNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGD--SVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQA-ATALAATLGADLILLSDVSGILDGKG---QRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIAS 235          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_ENTS8 (Acetylglutamate kinase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=argB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.226e-14
Identity = 57/181 (31.49%), Postives = 93/181 (51.38%), Query Frame = -3
Query:  201 RDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCI---RSLAQGVRTAS 734
            +DGLRVT A+ ++I++  L G  NK+L++   K G  +VGL   DG   +   +P   +LG VG+     P +I  L+ +G +PVI+S+   + G   N+NAD                 L+DV+GIL+ +      + E+     +++I  G +  GMI KV+  +   R+L + V  AS
Sbjct:   62 KDGLRVTPADQIDIITGALAGTANKTLLAWAKKHGIASVGLFLGDGD--SVSVTPLDEELGHVGQAHPGSPKLINTLLENGFMPVISSIGVTDSGDLMNVNADQA-ATALAATLGADLILLSDVSGILDGKG---QRIAEMTSAKAEQLIAQGIITDGMIVKVHAALDAARTLGRPVDIAS 236          
BLAST of CN188878 vs. ExPASy Swiss-Prot
Match: ARGB_ECOUT (Acetylglutamate kinase OS=Escherichia coli (strain UTI89 / UPEC) GN=argB PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.226e-14
Identity = 57/181 (31.49%), Postives = 94/181 (51.93%), Query Frame = -3
Query:  201 RDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSAKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTVXXXXXXXXXXXXXXXLTDVAGILENREDPMSLVKEIDIKGVKKMIEDGKVGGGMIPKVNCCI---RSLAQGVRTAS 734
            ++GLRVT A+ ++I++  L G  NK+L++   K    AVGL   DG   + + +    +LG VG      P +I  L+ +G++PV++S+   + GQ  N+NAD                 L+DV+GIL+ +      + E+     +++IE G +  GMI KVN  +   R+L + V  AS
Sbjct:   62 KNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGD--SVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQA-ATALAATLGADLILLSDVSGILDGKG---QRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIAS 236          
The following BLAST results are available for this feature:
BLAST of CN188878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_EDWI92.478e-1430.51Acetylglutamate kinase OS=Edwardsiella ictaluri (s... [more]
ARGB_STRMU3.236e-1428.72Acetylglutamate kinase OS=Streptococcus mutans GN=... [more]
ARGB_SODGM3.236e-1429.63Acetylglutamate kinase OS=Sodalis glossinidius (st... [more]
ARGB_SHISS4.226e-1431.49Acetylglutamate kinase OS=Shigella sonnei (strain ... [more]
ARGB_SHIFL4.226e-1431.49Acetylglutamate kinase OS=Shigella flexneri GN=arg... [more]
ARGB_SHIDS4.226e-1431.49Acetylglutamate kinase OS=Shigella dysenteriae ser... [more]
ARGB_SHIBS4.226e-1431.49Acetylglutamate kinase OS=Shigella boydii serotype... [more]
ARGB_SHIB34.226e-1431.49Acetylglutamate kinase OS=Shigella boydii serotype... [more]
ARGB_ENTS84.226e-1431.49Acetylglutamate kinase OS=Enterobacter sakazakii (... [more]
ARGB_ECOUT4.226e-1431.49Acetylglutamate kinase OS=Escherichia coli (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006P04_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006P04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188878 ID=CN188878; Name=CN188878; organism=Citrus sinensis; type=EST; length=763bp
CCTTTTTTTTTTTTTTTACAGTCCATCAATTTTGTTTATTTTTCAATAGC
CCCTTTAAGAAGTAAAAGAAAAAAAATAATTTAGGAATTAAGACGAGGAT
TAGAATTAGGTTTGATTAGCTAGCCAGTGATCATGGTACCGGCACCAGCA
TCAGTCAAAATCTCAAGAAGCAAGGAGTGTTCAACTCTTCCATCAATAAT
ACTAGCAGTCCTGACACCTTGAGCAAGTGATCTAATACAGCAATTCACTT
TGGGTATCATCCCACCACCAACTTTGCCATCTTCAATCATCTTTTTCACT
CCCTTGATATCGATCTCCTTCACCAAGCTCATTGGATCCTCTCTGTTCTC
AAGTATCCCCGCTACATCAGTCAACAATATCAGCTTCTCAGCACCCAATG
CCGCCGCCAGTTCCCCAGCCACAGTGTCCGCATTGATGTTATAAGATTGC
CCAAACTCATCCGCAGCCACAGAAGCAATCACTGGTATGTGTCCACTGTT
TACCAGAGGCTCAATGACCGTGGGGTCCACGCGGGCTACTTCACCAACGA
AACCCAGTTTAGCGGAGTTTGGGCTGGGCCGGGCCGTGAAGAGGCGCCCG
TCCATGCCCGAGAGCCCAACCGCGGTGGCGCCGGCTTTGTTGATGAGAGA
AACCAAGCTCTTGTTCACCCTCCCCACCAGAACCATGGACACGATCTCCA
TAGTGTTGGCATCAGTGACGCGGAGGCCGTCACGGAAAACGGGCTCGATT
CCGAAACGTTTGA
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