CN182085

Overview
NameCN182085
Unique NameCN182085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_LISW6 (Bifunctional protein folD OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=folD PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 4.506e-56
Identity = 116/214 (54.21%), Postives = 153/214 (71.50%), Query Frame = 2
Query:   20 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            IIDG+ +A+ I+  +  EV  L+ K  K PGLAVV+VG  + S++YV  K+K   E G+KS  I+LPE VSE +L+  V ELN    +HGILVQLPLPKHI+EEKV+  IS +KDVDGFHP+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  +ATVTI HS T +   + +EADI++ A G A  +
Sbjct:    4 IIDGEKLAKEIQERVTTEVAELA-KIDKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPETVSEEKLLEVVEELNTDDTIHGILVQLPLPKHISEEKVIDTISYDKDVDGFHPVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKNLPEVAKEADILVVATGLAKFV 214          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_GEOSF (Bifunctional protein folD OS=Geobacter sp. (strain FRC-32) GN=folD PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.236e-55
Identity = 120/216 (55.56%), Postives = 147/216 (68.06%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A IIDGKA+A  IR EI  EV  L+ + G  PGLAVV+VG    S+ YVSMK KAC +VGI S +  LP + +E EL+  + +LN    +HGILVQLPLPK IN EKVL  IS EKD DGFHP N+G+L +    PLF PCTP G + +LK +GV + GK  VVVGRSNIVG PV+ + L+ +ATVT+ HS T D  + V  AD+VIAA GQ  MI
Sbjct:    2 AKIIDGKAIAAKIRGEITAEVAKLAAQ-GITPGLAVVLVGEDPASKVYVSMKEKACKDVGIFSDEYKLPAETTEEELLQLIDKLNKDRKIHGILVQLPLPKQINTEKVLEAISPEKDADGFHPYNVGRLVI--GKPLFQPCTPYGVMVMLKETGVDLAGKEVVVVGRSNIVGKPVAFMCLQQNATVTLCHSKTRDLAAKVAMADVVIAAVGQPEMI 214          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_MOOTA (Bifunctional protein folD OS=Moorella thermoacetica (strain ATCC 39073) GN=folD PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.921e-55
Identity = 117/216 (54.17%), Postives = 150/216 (69.44%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A I+DGK +A  +R+E+ EEV  L  + G  PGLAVV+VG    SQ YV  K +AC EVGI S    LP   S+AEL+  + +LN  P +HGILVQLPLP HI+E+KV+  I+LEKDVDGF P N+G L +   D  F PCTP GC+ LL+++G+  KGK+AVVVGRSNIVG PV+++LL   ATVTI HS T D  +  R+ADI+IAA G+  +I
Sbjct:    3 AQILDGKKIAAEVRAEVKEEVSRLKAE-GINPGLAVVLVGEDPASQVYVRNKHRACEEVGIYSEVHRLPAATSQAELLKLIDQLNKDPKIHGILVQLPLPDHIDEKKVIDAIALEKDVDGFSPANVGNLVI--GDKCFYPCTPHGCMVLLEKAGIDPKGKKAVVVGRSNIVGKPVAMMLLARHATVTICHSRTRDLAAECRQADILIAAVGKPELI 215          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_LYSSC (Bifunctional protein folD OS=Lysinibacillus sphaericus (strain C3-41) GN=folD PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.110e-54
Identity = 112/216 (51.85%), Postives = 156/216 (72.22%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            + II+GK + Q IR+ +AE V  L E+ G  PGLAVV+VG  + S +YV  K+K+C  +G+ S  I LPE+  + EL++++ +LN   D+HGILVQLPLPKHI+E+ V+  I++EKDVDGF P+++GK+ M G++  FLPCTP G ++LL+ SG+ I GK AV+VGRS+IVG P+  LLL+ DATVT  HS T D  S  ++ADI+IAA G+A  I
Sbjct:    3 SAIINGKEIGQEIRNAVAERVIRLKEQ-GLTPGLAVVLVGDNQASATYVRNKQKSCEAIGMYSELIKLPEETKQEELLTQIQQLNQREDIHGILVQLPLPKHIDEDTVIATIAVEKDVDGFSPVSVGKM-MLGQE-TFLPCTPFGVMKLLEYSGIEIAGKHAVIVGRSHIVGKPMGQLLLQKDATVTYTHSKTPDLPSFTKQADILIAAVGRANFI 215          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_GEOKA (Bifunctional protein folD OS=Geobacillus kaustophilus GN=folD PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.450e-54
Identity = 116/216 (53.70%), Postives = 146/216 (67.59%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A II G  +A+TIR+ +A+E   L    G  PGLAV++VG    S SYV  K+KACAEVGI+SF    P  + E  L++K+ ELNV P VHGILVQLPLP HI E  V+  I+ EKDVDGFHP+N+GK+ +  R   FLPCTP G L +++ +G+ I GK  VVVGRSNIVG PV  L L+  ATVT  HS T D  +I R+ADI+I A G+A +I
Sbjct:    3 AQIISGTEMARTIRTALADEAAQLKAD-GVEPGLAVILVGDDPASHSYVKGKQKACAEVGIRSFLYTFPAAIDEETLLAKIRELNVDPAVHGILVQLPLPDHICEWSVIETIAPEKDVDGFHPINVGKMMIGQR--AFLPCTPHGILVMVQSAGIDIAGKHVVVVGRSNIVGKPVGQLFLREHATVTYTHSKTPDLAAITRQADILIVAVGKARLI 215          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_BREBN (Bifunctional protein folD OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=folD PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.893e-54
Identity = 118/216 (54.63%), Postives = 152/216 (70.37%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            ATI+ GK VAQ+IR+E+A EV  L +K G VPGL VVIVG    S SYV  K K C EVGI S  I     ++E EL+  + +LN  P+V+GILVQLPLP HI+E  V+  I+ EKDVDGFHP++IG + + G D + LPCTP G +EL+KR+G  + GK AVV+GRSNIVG PVSLLL + +ATVT+ HS T + E   ++ADI++ A G+A MI
Sbjct:    3 ATILQGKEVAQSIRAELANEVVEL-KKQGVVPGLTVVIVGDDPASHSYVRGKAKGCEEVGISSEIIRKDADITEEELLVIIQQLNENPNVNGILVQLPLPAHISEHAVIEAIAPEKDVDGFHPISIGNMVL-GNDTM-LPCTPHGIIELIKRTGTQMAGKHAVVIGRSNIVGKPVSLLLQQENATVTMCHSRTQNLEEYTQKADILVVATGRAHMI 215          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_LACS1 (Bifunctional protein folD OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=folD PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.217e-54
Identity = 114/216 (52.78%), Postives = 146/216 (67.59%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            ATI+DG+ +++ IR+ ++E+V LL ++ G  P L V++VG    SQ YV  KRK    +GI++ DI LPE V E ELI  + ELN    VHGILVQLPLPKHINE KV   I  EKDVDGFHPLNIGKL M    P  LPCTP+G +E  K   + + GKR V+VGRSNIVG P++ LL+ +DATVTI HS T +   + ++ADI+I A G+   I
Sbjct:    3 ATILDGRMLSKKIRTNVSEKVSLLKQE-GITPKLVVILVGEDPASQVYVRNKRKTAHALGIEAVDIRLPENVEEDELIRLIDELNSDGTVHGILVQLPLPKHINENKVTHRIIPEKDVDGFHPLNIGKLFMNIPGP--LPCTPRGIMEFFKEYDIPVSGKRVVIVGRSNIVGRPMAALLVNSDATVTIAHSKTKNLAEVTKQADILIVAIGKGEFI 215          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD2_GEOSL (Bifunctional protein folD 2 OS=Geobacter sulfurreducens GN=folD2 PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.734e-53
Identity = 114/216 (52.78%), Postives = 150/216 (69.44%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            ATIIDGKA+A+ IR+++A +V+ L  + G  PGLA V+VG    S+ YV MK  AC ++G+ S  I  P + +E EL++ ++ELN  P +HGILVQLPLP  IN ++VL  IS  KDVDGFHP N+G+L + G+ P F PCTP G + +L+ +GV + GK  VVVGRSNIVG PV+L+ L+ +ATVTI HS T D    VR AD+VIAA G   MI
Sbjct:    2 ATIIDGKAIAEKIRADLAAQVKELQSR-GITPGLATVLVGSDPASEVYVRMKGDACNKLGMHSVKITRPAETTEEELLALINELNNDPAIHGILVQLPLPPQINADRVLEAISPAKDVDGFHPYNVGRL-VTGK-PTFQPCTPYGVMVMLQEAGVDLAGKEVVVVGRSNIVGKPVALMCLQRNATVTICHSKTRDLPGRVRAADVVIAAVGVPEMI 214          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: C1TC_YEAST (C-1-tetrahydrofolate synthase, cytoplasmic OS=Saccharomyces cerevisiae GN=ADE3 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.734e-53
Identity = 108/211 (51.18%), Postives = 142/211 (67.30%), Query Frame = 2
Query:   20 IIDGKAVAQTIRSEIAEEVRLLSEKY-GKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQ 649
            ++DGKA AQ  RS IA E++ +     G  P LA++ VG R DS +YV MKRKA  E GI +  I L E  +E E++  V +LN  P  HGI+VQLPLP H++E+++   +  EKDVDGF P NIG+L  K   P FLPCTPKG +ELL ++ VTI+G R+VV+GRS+IVG PV+ LL   ++TVTI HS T D  S + +ADIV+ A GQ
Sbjct:    5 VLDGKACAQQFRSNIANEIKSIQGHVPGFAPNLAIIQVGNRPDSATYVRMKRKAAEEAGIVANFIHLDESATEFEVLRYVDQLNEDPHTHGIIVQLPLPAHLDEDRITSRVLAEKDVDGFGPTNIGELNKKNGHPFFLPCTPKGIIELLHKANVTIEGSRSVVIGRSDIVGSPVAELLKSLNSTVTITHSKTRDIASYLHDADIVVVAIGQ 215          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_CLOTH (Bifunctional protein folD OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=folD PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 4.663e-53
Identity = 109/217 (50.23%), Postives = 150/217 (69.12%), Query Frame = 2
Query:   11 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            +A +++GK ++  I+ E+  EV  L +K    PGLAV+IVG    S+ YV+ K+KACAE+GI+SF+  L E  ++ ELI  +H+LN    V GILVQLPLPKHI+EEKV+  I   KDVD FHP+N+GKL +   +P FLPCTP G +EL+K SG+ I GK  VVVGRSNIVG P+++LLL  + TVT+ HS T + + + + ADI++ A G+   I
Sbjct:    2 EAKVLNGKELSTKIKEELKIEVEDL-KKNNINPGLAVIIVGNDPASRVYVNSKKKACAEIGIESFEYALEENTTQEELIELIHKLNKDDKVSGILVQLPLPKHIDEEKVIYAIDPSKDVDAFHPVNVGKLMI--GNPDFLPCTPAGVMELIKESGIDITGKECVVVGRSNIVGKPMAMLLLAQNGTVTVCHSRTQNIDEVCKRADILVVAVGKPEFI 215          
The following BLAST results are available for this feature:
BLAST of CN182085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_LISW64.506e-5654.21Bifunctional protein folD OS=Listeria welshimeri s... [more]
FOLD_GEOSF2.236e-5555.56Bifunctional protein folD OS=Geobacter sp. (strain... [more]
FOLD_MOOTA2.921e-5554.17Bifunctional protein folD OS=Moorella thermoacetic... [more]
FOLD_LYSSC1.110e-5451.85Bifunctional protein folD OS=Lysinibacillus sphaer... [more]
FOLD_GEOKA1.450e-5453.70Bifunctional protein folD OS=Geobacillus kaustophi... [more]
FOLD_BREBN1.893e-5454.63Bifunctional protein folD OS=Brevibacillus brevis ... [more]
FOLD_LACS14.217e-5452.78Bifunctional protein folD OS=Lactobacillus salivar... [more]
FOLD2_GEOSL2.734e-5352.78Bifunctional protein folD 2 OS=Geobacter sulfurred... [more]
C1TC_YEAST2.734e-5351.18C-1-tetrahydrofolate synthase, cytoplasmic OS=Sacc... [more]
FOLD_CLOTH4.663e-5350.23Bifunctional protein folD OS=Clostridium thermocel... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O22_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182085 ID=CN182085; Name=CN182085; organism=Citrus sinensis; type=EST; length=662bp
GAGGGATCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCA
TCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGC
AAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTCA
AAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGT
CGTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGC
AAGGTTCACGAGCTTAACGTAATGCCTGATGTACATGGTATATTGGTTCA
ACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAA
GCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTC
GCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATG
CCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCTG
TTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCTG
CTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCACTGATCC
TGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAAG
CAATGATGATCA
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