CN182085

Overview
NameCN182085
Unique NameCN182085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_STRP1 (Bifunctional protein folD OS=Streptococcus pyogenes serotype M1 GN=folD PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.500e-51
Identity = 107/214 (50.00%), Postives = 143/214 (66.82%), Query Frame = 2
Query:   20 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            +IDGKA+AQ ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   N    +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I
Sbjct:    4 LIDGKALAQKMQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFI 215          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_ANADF (Bifunctional protein folD OS=Anaeromyxobacter sp. (strain Fw109-5) GN=folD PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.959e-51
Identity = 115/214 (53.74%), Postives = 140/214 (65.42%), Query Frame = 2
Query:   20 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            IIDGK +A  +R E+AE VR L    G  PGL+VV VG    S  YV  KRK C EVGI+S +  LP  VS+A+L++ V  LN  P VHGILVQLPLPKH++E  VL  I   KD DGFHP N+G L++ G      PCTP G + LL  + V  KGKRA+VVGRSNIVG P++ +LL+  ATVTI HS T D    V  ADIV+AA G+A +I
Sbjct:    2 IIDGKLIAAKVRGEVAEAVRALKAS-GVAPGLSVVRVGDDPASAIYVRGKRKDCEEVGIRSDEHHLPATVSQADLLALVARLNADPTVHGILVQLPLPKHLDERAVLDAIDPRKDSDGFHPFNVGALSI-GIPGTPRPCTPAGVMRLLDEARVDPKGKRAIVVGRSNIVGKPMAAMLLERHATVTIAHSRTQDLAGEVARADIVVAAIGKAELI 213          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_RHORT (Bifunctional protein folD OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=folD PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.559e-51
Identity = 110/218 (50.46%), Postives = 143/218 (65.60%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAM--KGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A +IDGKA+AQ +R  IA+EV  L    G VPGLAVV+VG    SQ YV  K K    VG+ S    L    SEAE+++KV  LN  P + GILVQLPLP HI+E+K+L  I  +KDVDGFHP+N+G+L++     +   +PCTPKGCL LLK     + GK A+V+GRSNIVG P++ LLL A+ TVT+ HS + D   + R  DIV+AA G+  M+
Sbjct:    3 AHLIDGKAIAQQLRERIAQEVADLKAHRGLVPGLAVVLVGEDAASQVYVGSKEKMAVAVGMHSVVCRLAATTSEAEVLAKVEALNADPTIDGILVQLPLPAHIDEDKILLAIDPDKDVDGFHPVNVGRLSIGQSNGEHGMVPCTPKGCLMLLKGVLGDLTGKTALVIGRSNIVGKPMAQLLLSANCTVTLAHSRSRDLPDLCRRMDIVVAAVGRPEMV 220          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_BURCC (Bifunctional protein folD OS=Burkholderia cenocepacia (strain MC0-3) GN=folD PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.559e-51
Identity = 107/212 (50.47%), Postives = 146/212 (68.87%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQ 649
            A +IDG A+++T+R++ AE    L+ + G  PGLAV++VG    S+ YV  K KAC + G  S     P  +SEA+L++++HELN  P +HGILVQLPLP HI+  KV+  I+ EKDVDGFH  N G L M G+ PLF PCTP G +++ +  G+ ++G  AVV+GRSNIVG P++++LL A ATVTI HS T D  +  READIV+AA G+
Sbjct:    3 ALLIDGNALSKTLRAQAAERAAALTAR-GHQPGLAVILVGANPASEVYVRNKIKACEDNGFFSLKDAYPATLSEADLLARIHELNRDPKIHGILVQLPLPAHIDSHKVIEAIAPEKDVDGFHVANAGAL-MTGK-PLFRPCTPYGVMKMFEAHGIALQGANAVVIGRSNIVGKPMAMMLLDAGATVTICHSKTRDLAAHTREADIVVAAVGK 211          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_STRU0 (Bifunctional protein folD OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=folD PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.342e-51
Identity = 103/214 (48.13%), Postives = 143/214 (66.82%), Query Frame = 2
Query:   20 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            IIDGKA+AQ ++S++A++V  L +++G VPGL V++VG    SQ YV  K ++    G KS  I L E + + ELI  +H  N    +HGILVQLPLP HINE++++ EI   KDVDGFHP+N G L   GR P+ +PCTP G +E+L    + ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T +   I  EAD++I A GQ   +
Sbjct:    4 IIDGKALAQKMQSQLAKKVEDLKQEFGIVPGLVVILVGDNPASQVYVRNKERSAIAAGFKSETIRLSESICQEELIKIIHRYNKDESIHGILVQLPLPTHINEKRIILEIDPHKDVDGFHPMNTGHL-WSGR-PIMVPCTPAGIMEMLSEYQIDLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLSKISSEADVLIVAIGQGHFV 215          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_PHOPR (Bifunctional protein folD OS=Photobacterium profundum GN=folD PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.342e-51
Identity = 108/216 (50.00%), Postives = 139/216 (64.35%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A IIDGK +AQT+R E+A  V+   E   + PGLAVV+VG    SQ YVS KRKAC EVG  S   DLP    E EL++ ++ELN   ++ GILVQLPLP  I+   +L  I  EKDVDGFHP N+G+L+   R P    CTPKG + LL+R  + ++GK AV+VG SNIVG P++L +L A AT T  H  T D E  +R+ADI++ A G+   I
Sbjct:    3 AQIIDGKLIAQTVRQEVAARVKARVEAGLRAPGLAVVLVGQDPASQIYVSSKRKACEEVGFISQSFDLPANTKEIELLALINELNTNKEIDGILVQLPLPAGIDTTNILEHIDPEKDVDGFHPYNVGRLSQ--RIPKLRSCTPKGIITLLERYNIPVRGKHAVIVGASNIVGRPMTLEMLLAGATTTTCHRFTQDLEHHIRQADILVVAVGKPHFI 216          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_LACLS (Bifunctional protein folD OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=folD PE=3 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 3.342e-51
Identity = 108/214 (50.47%), Postives = 144/214 (67.29%), Query Frame = 2
Query:   20 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            +IDGKA+A  +++E+  +V  L E  G VPGLAV++VG    SQ YV  K +    +G+ S  + LPE VSE EL+  + + N     HGILVQLPLPKHI+EEKVL  I  EKDVDGFHP+N+G+L     +PL +P TP G +E+ +   V + GKRAVV+GRSNIVG P++ LL+ ADATVTI HS T +   + +EADI++ A G+  MI
Sbjct:    3 LIDGKALAAKMQAELKVKVDKLKEA-GSVPGLAVILVGEDPASQIYVRNKARQATAIGLNSSVVRLPETVSEKELLELIEQYNQSEQWHGILVQLPLPKHISEEKVLLAIDPEKDVDGFHPMNMGRL--WAGNPLMIPSTPAGIMEMFREYNVELSGKRAVVIGRSNIVGKPMAQLLMMADATVTIAHSRTKNLRELTKEADILVVAIGRDRMI 213          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_LACLM (Bifunctional protein folD OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=folD PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.342e-51
Identity = 108/214 (50.47%), Postives = 144/214 (67.29%), Query Frame = 2
Query:   20 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            +IDGKA+A  +++E+  +V  L E  G VPGLAV++VG    SQ YV  K +    +G+ S  + LPE VSE EL+  + + N     HGILVQLPLPKHI+EEKVL  I  EKDVDGFHP+N+G+L     +PL +P TP G +E+ +   V + GKRAVV+GRSNIVG P++ LL+ ADATVTI HS T +   + +EADI++ A G+  MI
Sbjct:    3 LIDGKALAAKMQAELKVKVDKLKEA-GSVPGLAVILVGEDPASQIYVRNKARQATAIGLNSSVVRLPETVSEKELLELIEQYNQSEQWHGILVQLPLPKHISEEKVLLAIDPEKDVDGFHPMNMGRL--WAGNPLMIPSTPAGIMEMFREYNVELSGKRAVVIGRSNIVGKPMAQLLMMADATVTIAHSRTKNLRELTKEADILVVAIGRDRMI 213          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_EXIS2 (Bifunctional protein folD OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=folD PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.342e-51
Identity = 110/216 (50.93%), Postives = 142/216 (65.74%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A +IDGK VAQ+ R ++ EEV  L E+  + P L V+++G    SQSYV  K KA  E+G+ S  I LPE+  E+EL+  +  LN    VHGILVQLPLPKHI+E KV+  I+ EKDVDGFHP+++GK+ +   +P FLPCTP G L L+K   V I G+  VVVGRS IVG PV +L L   ATVT  HS T D  ++ R+ADI+I A G   +I
Sbjct:    2 AVVIDGKQVAQSYRLKLKEEVARLKEERIQ-PKLTVILIGEDPASQSYVRGKEKAAQEIGMDSDLIRLPEETKESELLHLIERLNADASVHGILVQLPLPKHIDESKVIFAIAPEKDVDGFHPVSVGKMMI--GEPTFLPCTPNGILHLVKEMNVPIAGRHVVVVGRSQIVGKPVGMLFLNESATVTYCHSKTADLGAMTRQADILIVAVGVPKLI 214          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_CAMHC (Bifunctional protein folD OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=folD PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.342e-51
Identity = 107/210 (50.95%), Postives = 143/210 (68.10%), Query Frame = 2
Query:   20 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQ 649
            +IDGKA++  ++ E+  E   L+EK G VP LAV++VG  K SQ+YV+ K KAC   GI+S    L    SE+ LI  +  LN   +V GILVQLPLPKHI+E K+L +IS EKDVDGFH +N+G+L + G D  F+PCTP G + L K   + I GK AVV+GRSNIVG P++ LLL A+ATVT+ HS T +   I ++ADI++ A G+
Sbjct:    3 LIDGKAISAKVKEEVKNEAAQLTEK-GVVPCLAVILVGDDKASQTYVNSKEKACKACGIRSLKYTLEANTSESALIDLIQSLNENDEVDGILVQLPLPKHIDENKILEKISCEKDVDGFHAVNVGRL-VSGLDG-FVPCTPCGIMRLFKEYDIEISGKNAVVIGRSNIVGKPMANLLLNANATVTVTHSKTQNLAKITKDADIIVVAIGK 209          
The following BLAST results are available for this feature:
BLAST of CN182085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_STRP11.500e-5150.00Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_ANADF1.959e-5153.74Bifunctional protein folD OS=Anaeromyxobacter sp. ... [more]
FOLD_RHORT2.559e-5150.46Bifunctional protein folD OS=Rhodospirillum rubrum... [more]
FOLD_BURCC2.559e-5150.47Bifunctional protein folD OS=Burkholderia cenocepa... [more]
FOLD_STRU03.342e-5148.13Bifunctional protein folD OS=Streptococcus uberis ... [more]
FOLD_PHOPR3.342e-5150.00Bifunctional protein folD OS=Photobacterium profun... [more]
FOLD_LACLS3.342e-5150.47Bifunctional protein folD OS=Lactococcus lactis su... [more]
FOLD_LACLM3.342e-5150.47Bifunctional protein folD OS=Lactococcus lactis su... [more]
FOLD_EXIS23.342e-5150.93Bifunctional protein folD OS=Exiguobacterium sibir... [more]
FOLD_CAMHC3.342e-5150.95Bifunctional protein folD OS=Campylobacter hominis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O22_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182085 ID=CN182085; Name=CN182085; organism=Citrus sinensis; type=EST; length=662bp
GAGGGATCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCA
TCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGC
AAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTCA
AAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGT
CGTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGC
AAGGTTCACGAGCTTAACGTAATGCCTGATGTACATGGTATATTGGTTCA
ACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAA
GCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTC
GCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATG
CCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCTG
TTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCTG
CTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCACTGATCC
TGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAAG
CAATGATGATCA
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