CN182085

Overview
NameCN182085
Unique NameCN182085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD1_RHILO (Bifunctional protein folD 1 OS=Rhizobium loti GN=folD1 PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.098e-45
Identity = 103/217 (47.47%), Postives = 135/217 (62.21%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A +IDGK+VA+ +   +      L  K    PGLAVVIVG    SQ YV+ K +   E G  S    LP + SE  L+  + +LN  P V+GILVQLPLP HI+  K++  I+ +KDVDGFH +N+GKL     D  F+PCTP G + L++R  G  + G  AVVVGRSNIVG P++ LLL A+ TVTI HS T D  ++ R ADI++AA G+  MI
Sbjct:    2 AEVIDGKSVAEDVVRTVKALTAELVAKGKAKPGLAVVIVGEDPASQVYVASKSRTAKECGFHSLQHTLPAETSEEALLKIIADLNADPAVNGILVQLPLPAHIDAGKIIQAIAPQKDVDGFHFINVGKLGTGELDTAFVPCTPAGSMLLIQRVRGKDLSGLNAVVVGRSNIVGKPMANLLLAANCTVTIAHSRTKDLPALARTADILVAAVGRPEMI 218          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: C1TC_MOUSE (C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus GN=Mthfd1 PE=1 SV=3)

HSP 1 Score: 182.185 bits (461), Expect = 2.098e-45
Identity = 102/219 (46.58%), Postives = 138/219 (63.01%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKY-GKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKH--INEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A I++GK V+  IR  +  +V  + E+  G  PGLA++ VG R DS  Y+++K KA  E+GIK+  I LP   +E+E++  V  LN    VHG +VQLPL     IN E V+  I+ EKDVDG   ++ GKLA    +  F+PCTPKGCLEL+K +GV I G+ AVVVGRS IVG P+  LLL  +ATVT  HS T + +  V + DI++ A GQ  M+
Sbjct:    4 AGILNGKLVSAQIRDRLKNQVTRMQEQVPGFTPGLAILQVGDRDDSNLYINVKLKAAEEIGIKATHIKLPRTSTESEVLKYVISLNEDASVHGFIVQLPLDSENSINTEAVINAIAPEKDVDGLTSVSAGKLARGDLNDCFIPCTPKGCLELIKEAGVQIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTANLDKEVNKGDILVVATGQPEMV 222          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_PEDPA (Bifunctional protein folD OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=folD PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.740e-45
Identity = 101/214 (47.20%), Postives = 138/214 (64.49%), Query Frame = 2
Query:   20 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            IIDGK +A  I  +   EV+ L  + G  P L VV+VG    SQ YV  K K   ++GIKS  + +   +SE EL+ K+ ELN   DV+ ILVQ+PLPKHI+  KV   I   KDVDGFHP+N+GKL         + CTP+G +E+ ++  + I+GKRAVVVGRS+IVG P++ LLL A+ATVT+ HS+T +  ++ +EADI++ A G A  I
Sbjct:    4 IIDGKTLAAEIDKQTMTEVQKLKNQ-GVEPHLVVVLVGENPASQIYVRNKEKRANKLGIKSTLVTMNADISENELLLKIQELNQTEDVNAILVQMPLPKHIDAFKVTMAIDPRKDVDGFHPVNVGKLFEGKTQHTPIACTPQGIMEMFQKYHIDIQGKRAVVVGRSSIVGKPMAALLLNANATVTLAHSYTKNLAALTKEADILVVATGIAHFI 216          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_PECCP (Bifunctional protein folD OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=folD PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.740e-45
Identity = 99/212 (46.70%), Postives = 130/212 (61.32%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQ 649
            A IIDGK +AQ ++ E+A  V        + PGLAVV+VG    SQ YVS KRK C EVG  S   DLP   +E+EL++ + +LN    + GILVQLPLP+ I+  KV+  I+  KDVDGFHP N+G+L    R PL   CTP+G + LL+R  +   G  AVVVG SNIVG P+SL LL A  T T+ H  T +    +  AD+++ A G+
Sbjct:    3 AKIIDGKTIAQQVKDEVAARVTQRLAAGKRAPGLAVVLVGENPASQIYVSSKRKVCEEVGFISRSYDLPATTTESELLTLIDQLNADQAIDGILVQLPLPEGIDNTKVIERIAPSKDVDGFHPYNVGRLCQ--RAPLLRACTPRGIVTLLERYNIDTFGLNAVVVGASNIVGRPMSLELLLAGCTTTVTHRFTKNLRHHIENADLLVVAVGK 212          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_MICAN (Bifunctional protein folD OS=Microcystis aeruginosa (strain NIES-843) GN=folD PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.740e-45
Identity = 98/214 (45.79%), Postives = 137/214 (64.02%), Query Frame = 2
Query:   20 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            I+DGKA+AQ I+  + E ++ L    G+ PGLAV++VG    S  YV  K KAC ++G+ SF        SE E+++++  LN    V GIL+QLPLPKH++   +L +I  +KD DG HPLN+G L ++G D     CTP G + LLK   + I GK AVVVGRS +VG P++L+LL+ +ATVTI HS T +   I R ADI++ A G+A +I
Sbjct:    8 ILDGKALAQKIQLGLGERIQTLKSPMGRPPGLAVLMVGDNPASAVYVRNKEKACTKIGMASFGRHFSTDTSELEILAEIVRLNQDERVDGILIQLPLPKHLDAVSLLYQIDPKKDADGLHPLNLGGL-VRGED-CIRSCTPAGVMALLKEYNIPIAGKHAVVVGRSILVGKPLALMLLEENATVTIAHSRTENLAEITRSADILVPAVGKANLI 219          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD2_SALTO (Bifunctional protein folD 2 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=folD2 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.740e-45
Identity = 97/213 (45.54%), Postives = 139/213 (65.26%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK--ADATVTIVHSHTTDPESIVREADIVIAAAG 646
            AT++DGKA A  I+ E+   V+ L+E+ G  PGL  V+VG    SQ+YV+ K + CAEVG+ S   +LP   ++ ++ + + +LN  P  HG +VQLPLP H++ ++VL  I  +KD DG HP+N+G+L +    P  LPCTP+G +ELL+R  V ++G R VV+GR N VG P+ LLL +   +ATVT+ H+ T D  +  R ADIVI AAG
Sbjct:    3 ATLLDGKATAAEIKDELRVRVKALAER-GVTPGLGTVLVGADPGSQAYVNGKHRDCAEVGVASLRRELPTDATQEQVDAVLADLNNDPACHGYIVQLPLPAHLDTQRVLELIDPDKDADGLHPVNLGRLVLGYPGP--LPCTPRGIVELLRRHDVALRGARVVVIGRGNTVGRPLGLLLTRRSENATVTLCHTGTLDLTAHTRAADIVIVAAG 212          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: C1TM_SCHPO (C-1-tetrahydrofolate synthase, mitochondrial OS=Schizosaccharomyces pombe GN=ade9 PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 2.740e-45
Identity = 102/213 (47.89%), Postives = 134/213 (62.91%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKV-PGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQ 649
            A I++GK +A+ ++  +AEEV+ L  K     P LA+V VG R+DS  YV MK KA   VGI       PE +    L+ ++ +LN    VHG+LVQLPLPKH+NE  V   I+  KDVDGF   NIG LA     P+  PCTPKG +ELLK + +++ G  AVV+GRS+IVG P+S LL K +ATVT+ HS T D    +  AD+VIAA G+
Sbjct:   33 ANILNGKLLARKLQRSVAEEVQALKAKDRNFKPALAIVQVGKREDSNVYVRMKEKAARLVGIDFKYCPFPETIQMPALLHELKKLNDDHTVHGVLVQLPLPKHLNERTVTESITPPKDVDGFGAFNIGLLAKNDATPIHYPCTPKGIMELLKDNKISVAGLNAVVLGRSDIVGNPISYLLRKDNATVTVCHSKTKDLIQHISNADLVIAALGK 245          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_SYMTH (Bifunctional protein folD OS=Symbiobacterium thermophilum GN=folD PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.579e-45
Identity = 105/216 (48.61%), Postives = 137/216 (63.43%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A +IDGK VA  ++ E+A EV  L  + G  PGLAVV+VG    S+ Y + K +   E+G+ S    LP   ++ EL   V +LN  P +HGILVQ PLP+ ++ + V+  I   KDVDGFHP N+G+L + G+D L +PCTP G + LL   GV  KGK AVVVGRSNIVG P++ LLL+  ATVTI HS T D     R ADI++AA G+  MI
Sbjct:    3 AGVIDGKQVAAQVQEEVAREVAALKAE-GLTPGLAVVLVGDDPASKVYTANKERTAKELGMHSVLYHLPATTTQQELADLVMQLNRDPAIHGILVQSPLPEGLDMDAVIRLIDPRKDVDGFHPENVGRLWI-GQDGL-VPCTPAGVMRLLDAYGVDPKGKHAVVVGRSNIVGKPMAALLLQRHATVTICHSRTPDLAETCRRADILVAAVGRLQMI 215          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_ROSCS (Bifunctional protein folD OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=folD PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.579e-45
Identity = 98/216 (45.37%), Postives = 136/216 (62.96%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A I+DG+A+A+T+R E+  +++   +  G  P LAVV + G   S+ Y    RK C ++GI  +D  LP   ++A L   +H L+    V+GIL+ LPLP   +  + + +I   KDVDG HP N G LAM    P  +P TP G +ELL R+ + IKG+RA VVGRS +VG P++LLLL+  ATVTI HS T D  S+VREADIV+AA G+  +I
Sbjct:    3 AMILDGRALAKTLREELRADIQAFVQTTGVTPSLAVVKIAGDPASERYTRTIRKGCEDIGIVFYDHTLPPDTTQAALEETLHALSFDRAVNGILLHLPLPPGFDSNRAIAQIDPHKDVDGVHPYNAGLLAM--GQPTMVPNTPAGGMELLLRNHILIKGQRATVVGRSVVVGKPMALLLLQEHATVTIAHSRTKDLASVVREADIVVAATGKPGLI 216          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_RHOBA (Bifunctional protein folD OS=Rhodopirellula baltica GN=folD PE=3 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 3.579e-45
Identity = 111/231 (48.05%), Postives = 143/231 (61.90%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKH------INEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK---------ADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            AT +DGK +A  IRSE+A +V          P LA V+VG    SQ YV  K +ACA+ GI S    +P   ++AEL++KV ELN  P V GILVQLPLP        I+E  VL  I   KDVD F P+N+G L M+GR P FLPCTP G ++LL R+G+   GK  VVVGRS+IVG P++++L +         A+ATVTI HS T++   I R+ADI+IAA G+  MI
Sbjct:    3 ATRLDGKKIAAEIRSEVAADVETFVSGGNPPPQLAAVLVGEDPASQVYVRNKERACAKAGIASRLDRMPAATTQAELLAKVAELNADPAVSGILVQLPLPSKANGGTGIDERAVLDAIDPIKDVDAFSPVNVG-LLMQGR-PRFLPCTPHGIVQLLHRTGIETSGKHVVVVGRSDIVGKPMAMMLAQKDSTCGPAVANATVTIAHSRTSNLAEICRQADILIAAVGRPEMI 231          
The following BLAST results are available for this feature:
BLAST of CN182085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD1_RHILO2.098e-4547.47Bifunctional protein folD 1 OS=Rhizobium loti GN=f... [more]
C1TC_MOUSE2.098e-4546.58C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus ... [more]
FOLD_PEDPA2.740e-4547.20Bifunctional protein folD OS=Pediococcus pentosace... [more]
FOLD_PECCP2.740e-4546.70Bifunctional protein folD OS=Pectobacterium caroto... [more]
FOLD_MICAN2.740e-4545.79Bifunctional protein folD OS=Microcystis aeruginos... [more]
FOLD2_SALTO2.740e-4545.54Bifunctional protein folD 2 OS=Salinispora tropica... [more]
C1TM_SCHPO2.740e-4547.89C-1-tetrahydrofolate synthase, mitochondrial OS=Sc... [more]
FOLD_SYMTH3.579e-4548.61Bifunctional protein folD OS=Symbiobacterium therm... [more]
FOLD_ROSCS3.579e-4545.37Bifunctional protein folD OS=Roseiflexus castenhol... [more]
FOLD_RHOBA3.579e-4548.05Bifunctional protein folD OS=Rhodopirellula baltic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O22_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182085 ID=CN182085; Name=CN182085; organism=Citrus sinensis; type=EST; length=662bp
GAGGGATCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCA
TCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGC
AAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTCA
AAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGT
CGTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGC
AAGGTTCACGAGCTTAACGTAATGCCTGATGTACATGGTATATTGGTTCA
ACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAA
GCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTC
GCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATG
CCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCTG
TTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCTG
CTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCACTGATCC
TGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAAG
CAATGATGATCA
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