CN182085

Overview
NameCN182085
Unique NameCN182085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_ACIBL (Bifunctional protein folD OS=Acidobacteria bacterium (strain Ellin345) GN=folD PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.342e-51
Identity = 110/216 (50.93%), Postives = 146/216 (67.59%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            ATI+DG  ++  I++E+A EV  L  K G  PGLAVV+VG    S+ YV  K KAC   GI S     P+ VS A+L+  V  LN   D+ GILVQLPLPK ++ +K+L  +S EKDVDGFHP+N+G L+     P  +PCTP GC+E+L+RS V ++G  AVVVGRS+IVG P+++LL  A+ATVTI HS T D  ++ R ADI++AA G+  MI
Sbjct:    3 ATILDGNKISAEIKTEVAAEVAELKAK-GLTPGLAVVLVGHNPASEIYVRNKVKACEMTGIYSEQHTPPDTVSTADLLQLVESLNRRNDIDGILVQLPLPKQVDSKKILLAVSPEKDVDGFHPMNVGYLSTV--RPGLVPCTPAGCMEILRRSNVPVEGADAVVVGRSDIVGKPIAMLLTNANATVTICHSKTHDLPAVCRRADILVAAIGRPGMI 215          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_SHELP (Bifunctional protein folD OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=folD PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.364e-51
Identity = 109/216 (50.46%), Postives = 139/216 (64.35%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A IIDGKA+AQ+IR +++ +V    E   +VPGLAV++VG    SQ YV  KR+AC EVG  S   DLP + SEA+L++ + + N  P + GILVQLPLP HI E KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T D E  VR AD++I A G+   I
Sbjct:    3 AQIIDGKAIAQSIRKQLSAKVTARKEAGKRVPGLAVILVGADPASQVYVGSKRRACEEVGFLSQSFDLPTETSEADLLALIDKCNEDPSIDGILVQLPLPDHIEESKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTRDLEDKVRRADLLIVAVGKPNFI 216          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_WOLWR (Bifunctional protein folD OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=folD PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.700e-51
Identity = 103/210 (49.05%), Postives = 139/210 (66.19%), Query Frame = 2
Query:   20 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQ 649
            IIDGK +A  +   +++++ +L  +Y   P L V++VG    SQ YV  K+K    +GI S  I LP+ +SE ELI K++ELN  P VHGILVQLPLP HI+  +V+  +S+EKDVDGFH  N+GKL +KG     +PCTPKG L L+K     + GK AVV+GRSNIVG P+  LLL+ + TVTI+HS + D      +ADIV+AA G+
Sbjct:    4 IIDGKKIANDLCERLSQKIDILKREYNIFPCLKVILVGSNPASQVYVRNKQKKAESIGISSETIVLPDNISEDELIEKINELNEDPSVHGILVQLPLPNHISASRVINTVSVEKDVDGFHDENVGKL-VKGEKNCLIPCTPKGSLHLIKSIEENLSGKNAVVIGRSNIVGKPMFYLLLQENCTVTILHSQSKDLAEYCSKADIVVAAVGK 212          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_VIBFM (Bifunctional protein folD OS=Vibrio fischeri (strain MJ11) GN=folD PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.700e-51
Identity = 108/216 (50.00%), Postives = 139/216 (64.35%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A IIDGK ++QT+RSE+   V+   E   + PGLAVV+VG    SQ YV  KR+AC EVG  S   DLP   SE+EL++ + ELN  P++ GILVQLPLP  ++  K+L  I  EKDVDGFHP N+G+L+   R P    CTPKG + LL R  + ++G  AVVVG SNIVG P++L LL A  T T  H  T D ES +R+AD+V+ A G+   I
Sbjct:    3 AQIIDGKLISQTVRSEVGARVKARVEAGLRAPGLAVVLVGQDPASQVYVGSKRRACEEVGFVSKSYDLPTTTSESELLNLIDELNQDPEIDGILVQLPLPAGMDSTKILEHIDPEKDVDGFHPYNVGRLSQ--RIPKLRSCTPKGIITLLDRYNIQVRGMHAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKDLESHIRQADLVVVAVGKPNFI 216          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_VIBF1 (Bifunctional protein folD OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=folD PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.700e-51
Identity = 108/216 (50.00%), Postives = 139/216 (64.35%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A IIDGK ++QT+RSE+   V+   E   + PGLAVV+VG    SQ YV  KR+AC EVG  S   DLP   SE+EL++ + ELN  P++ GILVQLPLP  ++  K+L  I  EKDVDGFHP N+G+L+   R P    CTPKG + LL R  + ++G  AVVVG SNIVG P++L LL A  T T  H  T D ES +R+AD+V+ A G+   I
Sbjct:    3 AQIIDGKLISQTVRSEVGARVKARVEAGLRAPGLAVVLVGQDPASQVYVGSKRRACEEVGFVSKSYDLPTTTSESELLNLIDELNQDPEIDGILVQLPLPAGMDSTKILEHIDPEKDVDGFHPYNVGRLSQ--RIPKLRSCTPKGIITLLDRYNIQVRGMHAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKDLESHIRQADLVVVAVGKPNFI 216          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD2_ROSDO (Bifunctional protein folD 2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=folD2 PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 5.700e-51
Identity = 106/216 (49.07%), Postives = 141/216 (65.28%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            ATIIDGKA A  +R+++AE V  + + +G  PGLAVV+VG    SQ YV  K K   E G+ S++  L    SEA+L++ V +LN  P+VHGILVQLPLPKH++E+ ++  I   KDVDGFH  N+G L    +    +PCTP GCL +L+    ++ G  AVV+GRSNIVG P++ LLL    TVTI HS T D   +VR ADIV+AA G+  M+
Sbjct:    3 ATIIDGKAFAAKVRAQVAEHVTRIKQDHGITPGLAVVLVGEDPASQVYVRSKGKQTVEAGMNSYEHKLDADTSEADLLAVVDKLNKDPNVHGILVQLPLPKHLDEDLIINSIDPAKDVDGFHISNVGLLGTGQKS--MVPCTPLGCLMMLREHHGSLSGMNAVVIGRSNIVGKPMAQLLLNDSCTVTIAHSRTKDLPDVVRGADIVVAAVGRPEMV 216          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_VIBSL (Bifunctional protein folD OS=Vibrio splendidus (strain LGP32) GN=folD PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 7.445e-51
Identity = 109/213 (51.17%), Postives = 139/213 (65.26%), Query Frame = 2
Query:   23 IDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            IDGK ++QT+RSE+A  V+  ++   + PGLAVV+VG    SQ YV  KRKAC EVG  S   DLP   +E EL++ V +LN  P++ GILVQLPLP  I+  +VL  I+ EKDVDGFHP N+G+LA   R P    CTPKG + LL R  + ++GK AVVVG SNIVG P++L LL A  T T  H  T D E  VR+AD+V+ A G+   I
Sbjct:    6 IDGKLISQTVRSEVAARVKARTQAGLRAPGLAVVLVGEDPASQVYVGSKRKACEEVGFVSKSYDLPATATEDELLTLVDQLNEDPEIDGILVQLPLPAGIDSTQVLERITPEKDVDGFHPYNVGRLAQ--RMPKLRSCTPKGIITLLDRYNIDLRGKHAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKDLEGHVRQADVVVVAVGKPNFI 216          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_SHEON (Bifunctional protein folD OS=Shewanella oneidensis GN=folD PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 7.445e-51
Identity = 108/212 (50.94%), Postives = 139/212 (65.57%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQ 649
            A IIDGKA+AQ+IR+++ E+V    E   +VPGLAV++VG    SQ YV  KRKAC EVG  S   DL    SEAEL++ + +LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R+AD+V+ A G+
Sbjct:    3 AQIIDGKAIAQSIRTQLREQVTARKEAGQRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLDTSCSEAELLALIDQLNDDPSIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRQADLVVVAVGK 212          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_MANSM (Bifunctional protein folD OS=Mannheimia succiniciproducens (strain MBEL55E) GN=folD PE=3 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 7.445e-51
Identity = 102/216 (47.22%), Postives = 144/216 (66.67%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A +I G A+A+ +++E+ +++     +  + PGLAV++VG    SQ YV  KRK+CAE+GI S   DL E  SEA L++ + ELN   D+ GILVQLPLPKHI+  KV+  I+  KDVDGFHP N+G+L    R P    CTP G ++LL+ + + +KG+ AV+VG SNIVG P+++ LL A  TVT+ H  TT+ E  VR+ADI++ A G+A  I
Sbjct:    3 AQVISGSALAKKVKTEVGQKIEQYVAQGKRAPGLAVILVGADPASQVYVGSKRKSCAEIGINSKSYDLEESTSEAALLTLIDELNNDADIDGILVQLPLPKHIDSTKVIERIAPHKDVDGFHPYNVGRLCQ--RIPTLRACTPYGIMKLLETTELNLKGRHAVIVGASNIVGRPMAMELLLAGCTVTVTHRFTTNLEGYVRQADILVVAVGKAEFI 216          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_ACTSZ (Bifunctional protein folD OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=folD PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 7.445e-51
Identity = 106/214 (49.53%), Postives = 141/214 (65.89%), Query Frame = 2
Query:   20 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            +I G  +A+  +SE+A ++R       +VPGLAV++VG    SQ YV  KRK+CAE+GI S   DLPE  +EAEL+S + +LN  P+V GILVQLPLPKHI+  KV+  I+  KDVDGFHP N+G+L    R P    CTP G ++LL+ +G  + G  AV+VG SNIVG P+++ LL A  TVT+ H  T D E  VR ADI++ A G+A  I
Sbjct:    5 VISGTELAKKTKSEVAGQIRRYISLGRRVPGLAVILVGSDPASQVYVGSKRKSCAEIGIDSKSYDLPETTTEAELLSIIDDLNRNPNVDGILVQLPLPKHIDSTKVIERIAPNKDVDGFHPYNVGRLCQ--RIPTLRACTPYGIMKLLETTGQDLHGLHAVIVGASNIVGRPMAMELLLAGCTVTVTHRFTRDLEEHVRRADILVVAVGKAEFI 216          
The following BLAST results are available for this feature:
BLAST of CN182085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_ACIBL3.342e-5150.93Bifunctional protein folD OS=Acidobacteria bacteri... [more]
FOLD_SHELP4.364e-5150.46Bifunctional protein folD OS=Shewanella loihica (s... [more]
FOLD_WOLWR5.700e-5149.05Bifunctional protein folD OS=Wolbachia sp. subsp. ... [more]
FOLD_VIBFM5.700e-5150.00Bifunctional protein folD OS=Vibrio fischeri (stra... [more]
FOLD_VIBF15.700e-5150.00Bifunctional protein folD OS=Vibrio fischeri (stra... [more]
FOLD2_ROSDO5.700e-5149.07Bifunctional protein folD 2 OS=Roseobacter denitri... [more]
FOLD_VIBSL7.445e-5151.17Bifunctional protein folD OS=Vibrio splendidus (st... [more]
FOLD_SHEON7.445e-5150.94Bifunctional protein folD OS=Shewanella oneidensis... [more]
FOLD_MANSM7.445e-5147.22Bifunctional protein folD OS=Mannheimia succinicip... [more]
FOLD_ACTSZ7.445e-5149.53Bifunctional protein folD OS=Actinobacillus succin... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O22_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182085 ID=CN182085; Name=CN182085; organism=Citrus sinensis; type=EST; length=662bp
GAGGGATCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCA
TCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGC
AAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTCA
AAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGT
CGTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGC
AAGGTTCACGAGCTTAACGTAATGCCTGATGTACATGGTATATTGGTTCA
ACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAA
GCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTC
GCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATG
CCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCTG
TTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCTG
CTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCACTGATCC
TGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAAG
CAATGATGATCA
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