CN182085

Overview
NameCN182085
Unique NameCN182085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_STAHJ (Bifunctional protein folD OS=Staphylococcus haemolyticus (strain JCSC1435) GN=folD PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 9.723e-51
Identity = 103/216 (47.69%), Postives = 152/216 (70.37%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A I+DGK +++  R  + E+V  L EK G  P L+V++VG    SQSYV+ K+KA  ++G+ S  + L E  SE +++ ++  LN    V GILVQ+PLPK ++E+K+L  I+ EKDVDGFHP NIGKL +   +  F+PCTP G +E+LK + + ++GK AVV+GRS+IVG PVS LLL+A+ATVTI+HS T D  S +++AD++++A GQ  ++
Sbjct:    3 AKILDGKQISKDYRQGLQEQVEALKEK-GYTPKLSVILVGNDGASQSYVNSKKKAAEKIGMISEIVHLDEDTSEEDVLKELDRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDGFHPSNIGKLYID--EQTFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQANATVTILHSRTKDMHSHLKDADVIVSAVGQPGLV 215          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_RHOS1 (Bifunctional protein folD OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=folD PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 9.723e-51
Identity = 110/213 (51.64%), Postives = 139/213 (65.26%), Query Frame = 2
Query:   23 IDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            IDGKA A  +R+ +AEEV  L E +G VPGLAVV+VG    SQ YV  K K   EVG+ SF+  LP + SEAEL++ +  LN  P VHGILVQLPLP H+N + V+  +   KDVDGFH  N+G+L    +    +PCTP GCL +L+    T+ G  AVVVGRSNIVG P++ LLL    TVTI HS T D  ++ R ADI++AA G+  MI
Sbjct:    6 IDGKAFAAGVRARVAEEVARLKEGHGIVPGLAVVLVGEDPASQVYVGAKGKQTVEVGMASFEHRLPAETSEAELLALIDRLNHDPAVHGILVQLPLPAHLNADLVINALDPAKDVDGFHISNVGRLGTGQKS--MVPCTPLGCLMMLRDHLGTLSGLNAVVVGRSNIVGKPMAQLLLGESCTVTIAHSRTRDLAAVCRGADILVAAVGRPEMI 216          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_OCEIH (Bifunctional protein folD OS=Oceanobacillus iheyensis GN=folD PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 9.723e-51
Identity = 105/216 (48.61%), Postives = 149/216 (68.98%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            AT+++GK +++ ++ ++  EV  L EK G  P L V++VG    S+SYV  K KACA  GI S  I+LPE +S+ EL+  + E N    VHGILVQLPLP  ++E+K++  IS  KDVDGFHP+N+GK+ M G D  F+PCTP G L +L+   ++++GK AV++GRSNIVG P+ LLLL+ +ATVT  HS T + + I ++ADI+I A G+A  I
Sbjct:    2 ATLLNGKELSEELKQKMKIEVDELKEK-GLTPHLTVILVGDNPASKSYVKGKEKACAVTGISSNLIELPENISQDELLQIIDEQNNDDSVHGILVQLPLPDQMDEQKIIHAISPAKDVDGFHPINVGKM-MTGED-TFIPCTPYGILTMLRSKDISLEGKHAVIIGRSNIVGKPIGLLLLQENATVTYTHSRTKNLQEITKQADILIVAIGRAHAI 214          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_BACCR (Bifunctional protein folD OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=folD PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 9.723e-51
Identity = 109/216 (50.46%), Postives = 148/216 (68.52%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+LPE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  MI
Sbjct:    3 AVIIKGNEVAEKKRAQLTEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIELPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELSKLADILIVAVGRPKMI 215          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_BACC4 (Bifunctional protein folD OS=Bacillus cereus (strain B4264) GN=folD PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 9.723e-51
Identity = 109/216 (50.46%), Postives = 148/216 (68.52%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+LPE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  MI
Sbjct:    3 AVIIKGNEVAEKKRAQLTEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIELPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETSLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELSKLADILIVAVGRPKMI 215          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_BACC2 (Bifunctional protein folD OS=Bacillus cereus (strain G9842) GN=folD PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 9.723e-51
Identity = 109/216 (50.46%), Postives = 148/216 (68.52%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+LPE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  MI
Sbjct:    3 AVIIKGNEVAEKKRAQLTEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIELPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELSKLADILIVAVGRPKMI 215          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD1_ROSDO (Bifunctional protein folD 1 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=folD1 PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 9.723e-51
Identity = 109/216 (50.46%), Postives = 141/216 (65.28%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            AT+IDGKA A  +R+++AE V  L   +G  PGLAVV+VG    SQ YV  K K   EVG+KS +  L    SE +L++ V +LN  PD+HGILVQLPLP H++E+ V+  I+ EKDVDGFH  N+G L    +    +PCTP GCL +L+    ++ G  AVVVGRSNIVG P++ LLL    TVTI HS T D   +VR ADIV+AA G+  M+
Sbjct:    3 ATLIDGKAFAARVRAQVAEHVTRLKADHGITPGLAVVLVGQDPASQVYVRSKGKQTTEVGMKSVEHKLDADTSETDLLAVVDQLNKDPDIHGILVQLPLPGHLDEDLVINSIAPEKDVDGFHISNVGLLGTGQKS--MVPCTPLGCLMMLRDYHGSLLGMDAVVVGRSNIVGKPMAQLLLGDSCTVTIAHSRTKDLADVVRRADIVVAAVGRPEMV 216          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD1_PSEMY (Bifunctional protein folD 1 OS=Pseudomonas mendocina (strain ymp) GN=folD1 PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 9.723e-51
Identity = 107/216 (49.54%), Postives = 144/216 (66.67%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A +IDGKA+A ++R +IA+ V    ++  + PGLAV++VG    SQ YVS KRK C EVG  S   DLP + S+A+L++ + ELN  P + GILVQLPLP+H++   +L  I  +KDVDGFHP NIG+LA   R PL  PCTPKG + LL+ +G  + G  AVVVG SNIVG P+++ LL A  TVT+ H  T D    V +ADIV+ AAG+  ++
Sbjct:    3 AQLIDGKAIAASLRQQIAQRVAERRQQGLRAPGLAVILVGTDPASQVYVSHKRKDCEEVGFLSRAYDLPAETSQADLLALIDELNEDPTIDGILVQLPLPEHLDSSLLLERIRPDKDVDGFHPYNIGRLAQ--RMPLLRPCTPKGIMTLLESTGADLYGMHAVVVGASNIVGRPMAMELLLAGCTVTVTHRFTKDLAGHVGQADIVVVAAGKPGLV 216          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: C1TC_DROME (C-1-tetrahydrofolate synthase, cytoplasmic OS=Drosophila melanogaster GN=pug PE=1 SV=4)

HSP 1 Score: 199.904 bits (507), Expect = 9.723e-51
Identity = 110/219 (50.23%), Postives = 147/219 (67.12%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGK-VPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLP--KHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A II G AVA++IR E+  EV  +S++    VPGL +V VGGR+DS  Y+ MK KA  E+GI +  + LP  ++E EL+ K+++LN  P VHGI+VQ+PL     I+  ++   +S EKDVDG H +N G+LA+ G    FLPCTP GCLEL++RSGV I G RAVV+GRS IVG P + LL  A+ATVT+ HS T + E I R ADI++   G A M+
Sbjct:   38 AKIISGTAVAKSIREELRNEVTAMSKQLADFVPGLRIVQVGGREDSNVYIRMKIKAATEIGIDAAHVQLPRSITEVELLDKINDLNEDPRVHGIIVQMPLDCDTPIDSHRITDAVSPEKDVDGLHTVNEGRLAI-GDLGGFLPCTPWGCLELIRRSGVEIAGARAVVLGRSKIVGTPAAELLKWANATVTVCHSKTRNLEEITRSADILVVGIGVAEMV 255          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_PHOLL (Bifunctional protein folD OS=Photorhabdus luminescens subsp. laumondii GN=folD PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.270e-50
Identity = 110/216 (50.93%), Postives = 137/216 (63.43%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A IIDGK +AQTIRSE+A  V+       + PGLAVV+VG    SQ YV+ KR+AC EVG  S   DLP+  SEAEL++ + +LN   D+ GILVQLPLP  I+  KVL  I  +KDVDGFHP NIG+L    R P   PCTP+G   LL+R G+   G  AV++G SNIVG P+SL LL A  T T+ H  T D    V +AD++I A G+   I
Sbjct:    3 AKIIDGKTIAQTIRSEVAVRVQQRVAAGRRAPGLAVVLVGENPASQIYVASKRRACEEVGFVSRSYDLPDTTSEAELLNLIDQLNNDSDIDGILVQLPLPAGIDNVKVLERIQPDKDVDGFHPYNIGRLCQ--RAPKLRPCTPRGIATLLERCGINTYGLNAVIIGASNIVGRPMSLELLLAGCTTTVTHRFTKDLRHHVEQADLLIVAVGKPNFI 216          
The following BLAST results are available for this feature:
BLAST of CN182085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_STAHJ9.723e-5147.69Bifunctional protein folD OS=Staphylococcus haemol... [more]
FOLD_RHOS19.723e-5151.64Bifunctional protein folD OS=Rhodobacter sphaeroid... [more]
FOLD_OCEIH9.723e-5148.61Bifunctional protein folD OS=Oceanobacillus iheyen... [more]
FOLD_BACCR9.723e-5150.46Bifunctional protein folD OS=Bacillus cereus (stra... [more]
FOLD_BACC49.723e-5150.46Bifunctional protein folD OS=Bacillus cereus (stra... [more]
FOLD_BACC29.723e-5150.46Bifunctional protein folD OS=Bacillus cereus (stra... [more]
FOLD1_ROSDO9.723e-5150.46Bifunctional protein folD 1 OS=Roseobacter denitri... [more]
FOLD1_PSEMY9.723e-5149.54Bifunctional protein folD 1 OS=Pseudomonas mendoci... [more]
C1TC_DROME9.723e-5150.23C-1-tetrahydrofolate synthase, cytoplasmic OS=Dros... [more]
FOLD_PHOLL1.270e-5050.93Bifunctional protein folD OS=Photorhabdus luminesc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O22_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182085 ID=CN182085; Name=CN182085; organism=Citrus sinensis; type=EST; length=662bp
GAGGGATCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCA
TCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGC
AAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTCA
AAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGT
CGTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGC
AAGGTTCACGAGCTTAACGTAATGCCTGATGTACATGGTATATTGGTTCA
ACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAA
GCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTC
GCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATG
CCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCTG
TTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCTG
CTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCACTGATCC
TGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAAG
CAATGATGATCA
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