CN182085

Overview
NameCN182085
Unique NameCN182085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_BACAN (Bifunctional protein folD OS=Bacillus anthracis GN=folD PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.829e-50
Identity = 107/216 (49.54%), Postives = 147/216 (68.06%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  M+
Sbjct:    3 AVIIKGNEVAEKKRAQLKEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTKLADILIVAVGRPKMV 215          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_BACAH (Bifunctional protein folD OS=Bacillus thuringiensis (strain Al Hakam) GN=folD PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.829e-50
Identity = 107/216 (49.54%), Postives = 147/216 (68.06%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  M+
Sbjct:    3 AVIIKGNEVAEKKRAQLKEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTKLADILIVAVGRPKMV 215          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_BACAC (Bifunctional protein folD OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=folD PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.829e-50
Identity = 107/216 (49.54%), Postives = 147/216 (68.06%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  M+
Sbjct:    3 AVIIKGNEVAEKKRAQLKEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTKLADILIVAVGRPKMV 215          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_BACAA (Bifunctional protein folD OS=Bacillus anthracis (strain A0248) GN=folD PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.829e-50
Identity = 107/216 (49.54%), Postives = 147/216 (68.06%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  M+
Sbjct:    3 AVIIKGNEVAEKKRAQLKEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTKLADILIVAVGRPKMV 215          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD3_SPHWW (Bifunctional protein folD 3 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=folD3 PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.829e-50
Identity = 110/216 (50.93%), Postives = 139/216 (64.35%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A IIDGKA A  +R+ +A  V       G+ PGLAVV+VG    SQ YV  K KA  E G++SF+  LP   SE EL++ V  LN    V GILVQLPLP HI+E+KV+  I  +KDVDGFH +N G+LA+   +  ++PCTP GCL LLK     + G  AVV+GRSNIVG P++ LLL  + TVTI HS T D   +VR ADIV+AA G+  M+
Sbjct:    9 AEIIDGKAYAAGLRARVATAVPAFRVAAGRAPGLAVVLVGEDAASQVYVRSKHKATVEAGMESFEHRLPATASETELLALVERLNADDRVDGILVQLPLPPHIDEKKVIATIDPDKDVDGFHVVNAGRLAV--GEAGYVPCTPLGCLMLLKDRRGDLSGLEAVVIGRSNIVGKPMAALLLAENCTVTIAHSRTRDLAEVVRRADIVVAAVGRPEMV 222          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD2_COLP3 (Bifunctional protein folD 2 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=folD2 PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.829e-50
Identity = 106/213 (49.77%), Postives = 139/213 (65.26%), Query Frame = 2
Query:   11 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQ 649
            +A++IDGKA+A+ +R  + EEV L      +VPGLAV++VG    SQ YV  KRKAC EVG  S   DLP   SE EL++ V ELN    + GILVQLPLPK++N + ++  I+  KDVDGFHP N+GKL +  R P   PCTPKG + L++ +G+  KG  A+V+G SNIVG P+ L LL A  TVT  H  T D E  VR AD+++ A G+
Sbjct:    2 RASLIDGKAIAKKLRDSVKEEVNLRISNGQRVPGLAVILVGCDPASQVYVGSKRKACEEVGFISRSYDLPHTTSEQELLALVSELNNDDSIDGILVQLPLPKNLNADLIIEHINPLKDVDGFHPSNVGKLVL--RQPGLRPCTPKGIVTLIESTGIDPKGLDALVIGASNIVGRPMGLELLLAKCTVTTTHRFTKDLEGKVRNADLLVVAVGK 212          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_SHESW (Bifunctional protein folD OS=Shewanella sp. (strain W3-18-1) GN=folD PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.695e-50
Identity = 108/212 (50.94%), Postives = 138/212 (65.09%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQ 649
            A IIDGKA+AQ+IR++++E+V    E   +VPGLAV++VG    SQ YV  KRKAC EVG  S   DL    SE EL+S +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R+AD+V+ A G+
Sbjct:    3 AQIIDGKAIAQSIRTKLSEKVTARKEAGQRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLETNCSEDELLSLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRQADLVVVAVGK 212          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_RHOSK (Bifunctional protein folD OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=folD PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.695e-50
Identity = 109/213 (51.17%), Postives = 138/213 (64.79%), Query Frame = 2
Query:   23 IDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            IDGKA A  +R+ +AEEV  L E +G VPGLAVV+VG    SQ YV  K K   EVG+ SF+  LP   SEAEL++ +  LN  P VHGILVQLPLP H+N + V+  +   KDVDGFH  N+G+L    +    +PCTP GCL +L+    T+ G  AVVVGRSNIVG P++ LLL    TVT+ HS T D  ++ R ADI++AA G+  MI
Sbjct:    6 IDGKAFAAGVRARVAEEVARLKEGHGIVPGLAVVLVGEDPASQVYVGAKGKQTVEVGMTSFEHRLPAGTSEAELLALIDRLNHDPAVHGILVQLPLPAHLNADLVINALDPAKDVDGFHISNVGRLGTGQKS--MVPCTPLGCLMMLRDHLGTLSGLNAVVVGRSNIVGKPMAQLLLGESCTVTVAHSRTRDLAAVCRGADILVAAVGRPEMI 216          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_PHOPO (Bifunctional protein folD OS=Photobacterium phosphoreum GN=folD PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.695e-50
Identity = 106/216 (49.07%), Postives = 139/216 (64.35%), Query Frame = 2
Query:   14 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            A IIDGK ++QT+R E+A  V+  ++   + PGLAVV+VG    SQ YV  KRKAC EVG  S   DLP   SE +L+  + ELN  P + GILVQLPLP  ++  ++L  I  EKDVDGFHP N+G+L+   R P    CTPKG + LL+R  + ++GK AV+VG SNIVG P++L LL A AT T  H  T D E  +R+ADI++ A G+   I
Sbjct:    3 AQIIDGKIISQTVRQEVAARVKARTDAGLRAPGLAVVLVGQDPASQIYVGSKRKACEEVGFISKSFDLPSSASEQQLLDLIDELNQDPTMDGILVQLPLPAGMDCTRILERIDPEKDVDGFHPYNVGRLSQ--RIPKLRSCTPKGIITLLERYNIEVRGKHAVIVGASNIVGRPMTLELLLAGATTTTCHRFTQDLEGHIRQADILVVAVGKPNFI 216          
BLAST of CN182085 vs. ExPASy Swiss-Prot
Match: FOLD_HALOH (Bifunctional protein folD OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=folD PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.695e-50
Identity = 110/214 (51.40%), Postives = 143/214 (66.82%), Query Frame = 2
Query:   20 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNVMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMI 661
            IIDGK +A  IR+E+ EEV+  +E+ G+ PGL+VV+VG    S++YV MK K   E+GI S    L  Q ++ EL+  V +LN    + GILVQLPLP HI+E+ V+  IS  KDVDGFHP+N GKL        F  CTP G +ELL R G+ I GK+AVVVGRSNIVG PV+ LLL+  ATVT+ HSHT D     R+ADI++ AAG+  ++
Sbjct:    4 IIDGKKIASEIRNELKEEVKKFTEE-GRPPGLSVVLVGDDPASRTYVRMKEKVAKEIGIYSKVDYLSRQTTQDELLDIVDKLNNDEKIDGILVQLPLPDHIDEKAVIEAISPFKDVDGFHPINTGKLFSGMTGQRFEACTPLGIIELLDREGIEIDGKKAVVVGRSNIVGKPVAHLLLERHATVTVCHSHTADLGIETRQADILVVAAGRPKLV 216          
The following BLAST results are available for this feature:
BLAST of CN182085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_BACAN2.829e-5049.54Bifunctional protein folD OS=Bacillus anthracis GN... [more]
FOLD_BACAH2.829e-5049.54Bifunctional protein folD OS=Bacillus thuringiensi... [more]
FOLD_BACAC2.829e-5049.54Bifunctional protein folD OS=Bacillus anthracis (s... [more]
FOLD_BACAA2.829e-5049.54Bifunctional protein folD OS=Bacillus anthracis (s... [more]
FOLD3_SPHWW2.829e-5050.93Bifunctional protein folD 3 OS=Sphingomonas wittic... [more]
FOLD2_COLP32.829e-5049.77Bifunctional protein folD 2 OS=Colwellia psychrery... [more]
FOLD_SHESW3.695e-5050.94Bifunctional protein folD OS=Shewanella sp. (strai... [more]
FOLD_RHOSK3.695e-5051.17Bifunctional protein folD OS=Rhodobacter sphaeroid... [more]
FOLD_PHOPO3.695e-5049.07Bifunctional protein folD OS=Photobacterium phosph... [more]
FOLD_HALOH3.695e-5051.40Bifunctional protein folD OS=Halothermothrix oreni... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O22_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182085 ID=CN182085; Name=CN182085; organism=Citrus sinensis; type=EST; length=662bp
GAGGGATCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCA
TCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGC
AAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTCA
AAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGT
CGTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGC
AAGGTTCACGAGCTTAACGTAATGCCTGATGTACATGGTATATTGGTTCA
ACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAA
GCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTC
GCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATG
CCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCTG
TTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCTG
CTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCACTGATCC
TGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAAG
CAATGATGATCA
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