CN182084
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182084 vs. ExPASy Swiss-Prot
Match: FOLD_DINSH (Bifunctional protein folD OS=Dinoroseobacter shibae (strain DFL 12) GN=folD PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.502e-20 Identity = 48/94 (51.06%), Postives = 61/94 (64.89%), Query Frame = -2 Query: 256 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDF 537 G AVV+GRSN+ G P+ LLL+ +ATVT+ HS T D + R ADI++AA G+A M+K W+KPGA VIDVG RL+GDVDF Sbjct: 159 GLEAVVIGRSNLFGKPMGQLLLRENATVTMAHSRTRDLAQVCRRADILVAAVGRAEMVKADWVKPGATVIDVGITRQPHPDDPDKTRLLGDVDF 252
BLAST of CN182084 vs. ExPASy Swiss-Prot
Match: FOLD_BREBN (Bifunctional protein folD OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=folD PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.502e-20 Identity = 58/129 (44.96%), Postives = 75/129 (58.14%), Query Frame = -2 Query: 151 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 537 GK AVV+GRSNIVG PVSLLL + +ATVT+ HS T + E ++ADI++ A G+A MI +KPGA VIDVG N ++ +LVGDV F E MLL+NT+ AK+ Sbjct: 158 GKHAVVIGRSNIVGKPVSLLLQQENATVTMCHSRTQNLEEYTQKADILVVATGRAHMIGKEHVKPGAVVIDVGVNRIETG------KLVGDVKFDEVKDVASFITPVPGGVGPMTITMLLKNTVAAAKK 280
BLAST of CN182084 vs. ExPASy Swiss-Prot
Match: FOLD_AZOSE (Bifunctional protein folD OS=Azoarcus sp. (strain EbN1) GN=folD PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 4.502e-20 Identity = 57/131 (43.51%), Postives = 74/131 (56.49%), Query Frame = -2 Query: 148 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRV 540 +G AVV+GRSNIVG P+++LL A ATVT+ HS T D R ADI++AA G+ + G IKPGA VIDVG N + + +L GDVDF A + MLL NT++ A+RV Sbjct: 157 QGAEAVVIGRSNIVGKPMAMLLTNAGATVTVTHSKTRDLAFHTRRADILVAAIGKPRFVTGDMIKPGAVVIDVGINRLTEGPDAG--KLCGDVDFESAKEVASLITPVPGGVGPMTITMLLANTVESAERV 285
BLAST of CN182084 vs. ExPASy Swiss-Prot
Match: FOLD_POLSJ (Bifunctional protein folD OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=folD PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.880e-20 Identity = 54/131 (41.22%), Postives = 79/131 (60.31%), Query Frame = -2 Query: 148 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKRV 540 +GK AVV+GRSNIVG P++++LL+ +ATVTI HS T D +++ +AD+++AA G+ ++ +KPGA VIDVG N D+ +L GDVDF + MLL NTL+ A+R+ Sbjct: 157 RGKHAVVIGRSNIVGKPMAMMLLQKNATVTICHSATKDLKAMTLQADVIVAAVGKRNVLTADMVKPGAVVIDVGMNRNDEG------KLCGDVDFEGVKEVAGYITPVPGGVGPMTITMLLVNTLESAERL 281
BLAST of CN182084 vs. ExPASy Swiss-Prot
Match: FOLD_POLNA (Bifunctional protein folD OS=Polaromonas naphthalenivorans (strain CJ2) GN=folD PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.880e-20 Identity = 54/130 (41.54%), Postives = 79/130 (60.77%), Query Frame = -2 Query: 151 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 540 +GK AVV+GRSNIVG P++L+LL+ +ATVTI HS T D +++ +AD+++AA G+ +++ +KPGA VIDVG N ++ +L GDVDF + MLL NTL+ A+R Sbjct: 157 RGKHAVVIGRSNIVGKPMALMLLQKNATVTICHSATADLKAMTLQADVIVAAVGKRNVLRADMVKPGAVVIDVGMNRNEEG------KLCGDVDFDGVKEVAGYITPVPGGVGPMTITMLLVNTLEAAER 280
BLAST of CN182084 vs. ExPASy Swiss-Prot
Match: FOLD_PARUW (Bifunctional protein folD OS=Protochlamydia amoebophila (strain UWE25) GN=folD PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.880e-20 Identity = 44/98 (44.90%), Postives = 70/98 (71.43%), Query Frame = -2 Query: 256 GKRAVVVGRSNIVGLPVSLLLLKA----DATVTIVHSHTTDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDF 537 GK A+++GRSNIVG P++ LL+++ +ATVT+ H +T + + + +AD++I A GQ +I +K G ++DVG N + DS+KK+GY++VGDVDF Sbjct: 154 GKHALIIGRSNIVGKPMAALLMQSYPGGNATVTVAHRYTKNLKELCLQADLIIVAIGQPKLITADMVKEGVIIVDVGINKIHDSSKKNGYQIVGDVDF 251
BLAST of CN182084 vs. ExPASy Swiss-Prot
Match: FOLD_JANMA (Bifunctional protein folD OS=Janthinobacterium sp. (strain Marseille) GN=folD PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.880e-20 Identity = 59/129 (45.74%), Postives = 75/129 (58.14%), Query Frame = -2 Query: 151 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 537 GK AVV+GRSN VG P++LLLL+A+ATVTI HS T D R+AD+V+AA G+ + IKPGA VIDVG N D+ +L GDVDF A + MLL NT++ A+R Sbjct: 158 GKHAVVIGRSNTVGKPMALLLLQANATVTICHSGTADLAYHTRQADVVVAATGRRNTLTAEMIKPGAIVIDVGINRDDNG------KLCGDVDFANAKEVASYITPVPGGVGPMTITMLLVNTIEAAER 280
BLAST of CN182084 vs. ExPASy Swiss-Prot
Match: FOLD_BRAJA (Bifunctional protein folD OS=Bradyrhizobium japonicum GN=folD PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.880e-20 Identity = 48/98 (48.98%), Postives = 67/98 (68.37%), Query Frame = -2 Query: 247 KGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEA 540 +G A+V+GRSN+VG P+ LLL +ATVTI HS + D +V+ AD+V AA G+ M++G W+KPGA VID+G + + K+ RLVGDV + EA Sbjct: 158 EGLNAIVIGRSNLVGRPLVQLLLNENATVTIAHSRSRDLPGLVKRADLVYAAVGKPEMVRGDWLKPGATVIDIGISRIPKEDGKT--RLVGDVAYQEA 253
BLAST of CN182084 vs. ExPASy Swiss-Prot
Match: FOLD1_SINMW (Bifunctional protein folD 1 OS=Sinorhizobium medicae (strain WSM419) GN=folD1 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.880e-20 Identity = 56/130 (43.08%), Postives = 72/130 (55.38%), Query Frame = -2 Query: 151 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG-YRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAKR 537 G AVV+GRSN+ G P+ LLL A+ATVT HS T + + R ADI++AA G+ M+K W+KPGA VIDVG N V + G +LVGDV F E + ML+ NT+ A R Sbjct: 161 GLSAVVIGRSNLFGKPMGALLLAANATVTTAHSRTKNLPEVCRNADILVAAVGRPEMVKADWVKPGAMVIDVGINRVPAPERGEGKTKLVGDVAFKECAELASVITPVPGGVGPMTIAMLMANTIIAAHR 290
BLAST of CN182084 vs. ExPASy Swiss-Prot
Match: FOLD_SYNJA (Bifunctional protein folD OS=Synechococcus sp. (strain JA-3-3Ab) GN=folD PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.679e-20 Identity = 54/128 (42.19%), Postives = 73/128 (57.03%), Query Frame = -2 Query: 154 GKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTTDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDFHEACKXXXXXXXXXXXXXXXXXXMLLRNTLDGAK 537 G++AVVVGRS +VG P+SL+LL ADATVT+ HS T + + R ADIV+ A G+ ++ +KPGA V+DVG N + D +LVGDVD+ + MLL NTL+ K Sbjct: 159 GRKAVVVGRSLLVGKPLSLMLLAADATVTVAHSRTPNLAEVTRSADIVVMAVGRPRLLTADMVKPGAVVVDVGINRIQD--PDGSEQLVGDVDYEAVKERAAAITPVPGGVGPMTVTMLLANTLESYK 284 The following BLAST results are available for this feature:
BLAST of CN182084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN182084 ID=CN182084; Name=CN182084; organism=Citrus sinensis; type=EST; length=541bpback to top |