CN182072

Overview
NameCN182072
Unique NameCN182072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length530
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13509 contig Csv1_Contig13509:10..539. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN182072 vs. ExPASy Swiss-Prot
Match: THIL_BOVIN (Acetyl-CoA acetyltransferase, mitochondrial OS=Bos taurus GN=ACAT1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 5.461e-23
Identity = 51/96 (53.12%), Postives = 71/96 (73.96%), Query Frame = 3
Query:    6 IAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 293
            +A+I  +ADAA  P  F  APA A+PK + +AGL+   +  +E+NEAF+VV LAN K+L ++P KVN++GGAV+LGHP+G SGARI+V L   L+Q
Sbjct:  304 LARIAAFADAAVEPIDFPLAPAYAVPKVLKDAGLKKEDITMWEVNEAFSVVVLANIKMLEMDPQKVNINGGAVSLGHPIGMSGARIVVHLAHALKQ 399          
BLAST of CN182072 vs. ExPASy Swiss-Prot
Match: THIL_MOUSE (Acetyl-CoA acetyltransferase, mitochondrial OS=Mus musculus GN=Acat1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.075e-22
Identity = 50/95 (52.63%), Postives = 69/95 (72.63%), Query Frame = 3
Query:    6 IAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLR 290
            +A+I  +ADAA  P  F  APA A+PK +  AGL+   +  +E+NEAF+VV LAN K+L ++P KVN+HGGAV+LGHP+G SGARI+V +   L+
Sbjct:  306 LARIAAFADAAVDPIDFPLAPAYAVPKVLKYAGLKKEDIAMWEVNEAFSVVVLANIKMLEIDPQKVNIHGGAVSLGHPIGMSGARIVVHMAHALK 400          
BLAST of CN182072 vs. ExPASy Swiss-Prot
Match: THIL_DANRE (Acetyl-CoA acetyltransferase, mitochondrial OS=Danio rerio GN=acat1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.710e-22
Identity = 49/87 (56.32%), Postives = 67/87 (77.01%), Query Frame = 3
Query:    6 IAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARIL 266
            +AKI  +ADAA AP  F  APA A+PK +  AG++   +  +EINEAF+VV LAN K+L ++PD+VN++GGAV+LGHP+G SGARI+
Sbjct:  302 LAKIVAFADAAVAPIDFPIAPAFAVPKVLKAAGIKKEDIAMWEINEAFSVVVLANIKMLDIDPDRVNINGGAVSLGHPIGMSGARIV 388          
BLAST of CN182072 vs. ExPASy Swiss-Prot
Match: THIL_XENTR (Acetyl-CoA acetyltransferase, mitochondrial OS=Xenopus tropicalis GN=acat1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 7.885e-22
Identity = 51/96 (53.12%), Postives = 71/96 (73.96%), Query Frame = 3
Query:    6 IAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 293
            +A+I  +ADAA  P  F  APA A+PK +S AGL+   +  +EINEAF+VV LAN K+L ++P +VNV+GGAV+LGHP+G SGARI+  +  VL++
Sbjct:  302 LARIVAFADAAVDPIDFPIAPAYAVPKLLSEAGLKKEDIAMWEINEAFSVVVLANVKMLDIDPARVNVNGGAVSLGHPIGMSGARIVGHMAHVLKK 397          
BLAST of CN182072 vs. ExPASy Swiss-Prot
Match: THILB_XENLA (Acetyl-CoA acetyltransferase B, mitochondrial OS=Xenopus laevis GN=acat1-B PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.030e-21
Identity = 52/96 (54.17%), Postives = 70/96 (72.92%), Query Frame = 3
Query:    6 IAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 293
            +A+I  +ADAA  P  F  APA AIPK +S AGL+   +  +EINEAF+VV LAN K+L ++P +VNV+GGAV+LGHP+G SGARI+  +   LR+
Sbjct:  302 LARIVAFADAAVDPIDFPIAPAYAIPKLLSEAGLKKEDIAMWEINEAFSVVVLANIKMLDIDPARVNVNGGAVSLGHPIGMSGARIVGHMAHALRK 397          
BLAST of CN182072 vs. ExPASy Swiss-Prot
Match: THILA_XENLA (Acetyl-CoA acetyltransferase A, mitochondrial OS=Xenopus laevis GN=acat1-A PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.030e-21
Identity = 50/96 (52.08%), Postives = 71/96 (73.96%), Query Frame = 3
Query:    6 IAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 293
            +A+I  +ADAA  P  F  APA A+PK +S AGL+   +  +EINEAF+VV LAN K+LG++P +VN++GGAV+LGHP+G SGARI+  +   L++
Sbjct:  302 LARIVAFADAAVDPIDFPIAPAYAVPKLLSEAGLKKEDIAMWEINEAFSVVVLANIKMLGIDPARVNMNGGAVSLGHPIGMSGARIVGHMAHALKK 397          
BLAST of CN182072 vs. ExPASy Swiss-Prot
Match: THIC_MOUSE (Acetyl-CoA acetyltransferase, cytosolic OS=Mus musculus GN=Acat2 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 8.718e-21
Identity = 50/96 (52.08%), Postives = 64/96 (66.67%), Query Frame = 3
Query:    6 IAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 293
            +A+I  ++ A   P +    P  AI +A++ AG     VD +EINEAFA V+ A  K LGLNP+KVN+ GGA+ALGHPLG SG RILVTLL  L +
Sbjct:  277 LARIVSWSQAGVEPSVMGVGPIPAIKQAVAKAGWSLEDVDLFEINEAFAAVSAAIAKELGLNPEKVNIDGGAIALGHPLGASGCRILVTLLHTLER 372          
BLAST of CN182072 vs. ExPASy Swiss-Prot
Match: THIC_HUMAN (Acetyl-CoA acetyltransferase, cytosolic OS=Homo sapiens GN=ACAT2 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 3.313e-20
Identity = 49/96 (51.04%), Postives = 63/96 (65.62%), Query Frame = 3
Query:    6 IAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 293
            +A+I  ++     P +    P  AI +A++ AG     VD +EINEAFA V+ A  K LGLNP+KVN+ GGA+ALGHPLG SG RILVTLL  L +
Sbjct:  277 LARIVSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVDIFEINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLER 372          
BLAST of CN182072 vs. ExPASy Swiss-Prot
Match: THIC_RAT (Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus GN=Acat2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.651e-20
Identity = 48/96 (50.00%), Postives = 64/96 (66.67%), Query Frame = 3
Query:    6 IAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 293
            +A++  ++ A   P +    P  AI +A++ AG     VD +EINEAFA V+ A  K LGL+P+KVN+ GGA+ALGHPLG SG RILVTLL  L +
Sbjct:  277 LAQVVSWSQAGVEPSVMGVGPIPAIKQAVAKAGWSLEDVDVFEINEAFAAVSAAIAKELGLSPEKVNIDGGAIALGHPLGASGCRILVTLLHTLER 372          
BLAST of CN182072 vs. ExPASy Swiss-Prot
Match: THIL_MACFA (Acetyl-CoA acetyltransferase, mitochondrial OS=Macaca fascicularis GN=ACAT1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.248e-19
Identity = 45/96 (46.88%), Postives = 66/96 (68.75%), Query Frame = 3
Query:    6 IAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 293
            +A+I  +ADAA  P  F  AP  A+   + + GL+   +  +E+NEAF++V LAN K+L ++P KVN++GGAV+LGHP+G SGARI+  L   L+Q
Sbjct:  309 LARIVAFADAAVEPIDFPIAPVHAVSMVLKDVGLKKEDIAMWEVNEAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ 404          
The following BLAST results are available for this feature:
BLAST of CN182072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
THIL_BOVIN5.461e-2353.13Acetyl-CoA acetyltransferase, mitochondrial OS=Bos... [more]
THIL_MOUSE2.075e-2252.63Acetyl-CoA acetyltransferase, mitochondrial OS=Mus... [more]
THIL_DANRE2.710e-2256.32Acetyl-CoA acetyltransferase, mitochondrial OS=Dan... [more]
THIL_XENTR7.885e-2253.13Acetyl-CoA acetyltransferase, mitochondrial OS=Xen... [more]
THILB_XENLA1.030e-2154.17Acetyl-CoA acetyltransferase B, mitochondrial OS=X... [more]
THILA_XENLA1.030e-2152.08Acetyl-CoA acetyltransferase A, mitochondrial OS=X... [more]
THIC_MOUSE8.718e-2152.08Acetyl-CoA acetyltransferase, cytosolic OS=Mus mus... [more]
THIC_HUMAN3.313e-2051.04Acetyl-CoA acetyltransferase, cytosolic OS=Homo sa... [more]
THIC_RAT5.651e-2050.00Acetyl-CoA acetyltransferase, cytosolic OS=Rattus ... [more]
THIL_MACFA6.248e-1946.88Acetyl-CoA acetyltransferase, mitochondrial OS=Mac... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182072 ID=CN182072; Name=CN182072; organism=Citrus sinensis; type=EST; length=530bp
GAGGGATCGCCAAGATCACAGGATATGCTGATGCTGCTCAGGCACCAGAG
ATGTTTACGACAGCTCCAGCCCTAGCCATACCTAAAGCCATTTCAAATGC
TGGCTTGGAGGCTTCTCAAGTTGACTGTTACGAAATAAATGAGGCCTTTG
CTGTCGTCGCCCTTGCAAACCAGAAATTGCTTGGACTAAATCCTGACAAG
GTTAATGTCCATGGTGGAGCAGTAGCTTTGGGACATCCTCTGGGCTGCAG
CGGAGCTCGTATCTTGGTCACACTTTTGGGGGTACTTAGGCAGAAAAACG
GGAAATACGGTGTTGGTGGCGTTTGCAACGGAGGAGGAGGTGCATCGGCA
CTTGTTGTAGAGCTTGTGTAAGCCTTTTCTGTTCGGATTATTATCAACGA
GGTTGCACCCTTCTTGTGGAGTATAATTATGGCCCATTAGGGTGGGGTGT
TGTGCAATTGTATCTCCGTTTCTTTTTCATATGTGCTTTCGTCTTCAATA
AAAAGATAATAATTTTCTGGCTTAAAAAAA
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