CN182068

Overview
NameCN182068
Unique NameCN182068
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length676
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182068 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.379e-39
Identity = 86/199 (43.22%), Postives = 124/199 (62.31%), Query Frame = 2
Query:   80 AMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSF-STHGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYP 673
            AM L  A VLP V ++ + LD+L+II   G    +S +EIAS +PT NP+  A M+DR+L LL  ++++ CS  S    R+Y LAPV KY   +Q+GVS+     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + K+ ++Y+GFQ +T LVDV            SKYP
Sbjct:    4 AMQLACASVLPMVLKSAIELDLLEIIR--GQDTCMSPTEIASHLPTTNPDAPA-MVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQTYQGFQGLTSLVDVGGGTGATLTMILSKYP 199          
BLAST of CN182068 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.755e-37
Identity = 87/222 (39.19%), Postives = 126/222 (56.76%), Query Frame = 2
Query:   20 GSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFSTH---GVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPH 676
            G++T+ K+   +++E++   A+ L +A   P + ++   L +LDI +KAG G  +S SEIASQI  KNP  A  +LDR+L LL S ++L C          R+Y  AP+  Y  S+    S+ P + L  DKVMM  WF L D ILEG + + +A GM  +DY GTD RFN VFN GM   T  V+ K++++Y GF ++  LVDV            +K+ H
Sbjct:    7 GNYTQPKT--LDKDEQLAGLAVTLANAAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGAKNPN-APVLLDRMLRLLASHSVLTCKLQKGEGGSQRVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVKVLVDVGGNIGVNVSMIVAKHTH 225          
BLAST of CN182068 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.514e-35
Identity = 81/227 (35.68%), Postives = 129/227 (56.83%), Query Frame = 2
Query:   17 MGSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPG--AELSASEIASQIPT--KNPEGAAKMLDRVLGLLVSFNILCCSFSTHGVRL---YSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPH 676
            MGS     + V +EE  +Y  AM L S+ +LP   +  + L +L+++ K   G  A L+  E+ +++P    +P  AA M+DR+L LL S++++ C       R    YS APV K+   +++GVSM     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD+RFN VFN GM   +  +  K+++ Y GF+ ++ LVDV            S++PH
Sbjct:    1 MGSTAGDVAAVVDEEACMY--AMQLASSSILPMTLKNAIELGLLEVLQKEAGGGKAALAPEEVVARMPAAPSDPAAAAAMVDRMLRLLASYDVVRCQMEDRDGRYERRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPH 225          
BLAST of CN182068 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.656e-34
Identity = 80/209 (38.28%), Postives = 124/209 (59.33%), Query Frame = 2
Query:   17 MGSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGP-GAELSASEIASQIPTK--NPEGAAKMLDRVLGLLVSFNILCCSFSTHG---VRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDV 625
            MGS  +  + V +EE  +Y  AM L SA +LP   +  + L +L+++    P G  L+  E+ +++P    NP+ AA M+DR+L LL S++++ C          R YS APV K+   +++GVSM     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN VFN GM   +  +  K++E Y GF+ ++ LVDV
Sbjct:    1 MGSTAEDVAAVADEEACMY--AMQLASASILPMTLKNALELGLLEVLQAEAPAGKALAPEEVVARLPVAPTNPD-AADMVDRMLRLLASYDVVKCQMEDKDGKYERRYSAAPVGKWLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDV 206          
BLAST of CN182068 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.130e-33
Identity = 79/230 (34.35%), Postives = 126/230 (54.78%), Query Frame = 2
Query:   17 MGSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKA------GPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFSTHG----VRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPH 676
            MGS     +   +EE  +Y  A+ L S+ +LP   +  + L +L+ +  A      G  A L+ +E+A ++P+K    AA M+DR+L LL S+N++ C           R Y+ APV K+   +++GVSM     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD+RFN VFN GM   +  +  K+++ Y GF   + +VDV            S++PH
Sbjct:    1 MGSTAADMAAAADEEACMY--ALQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFDAASTVVDVGGGVGATVAAVVSRHPH 228          
BLAST of CN182068 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.293e-29
Identity = 72/203 (35.47%), Postives = 119/203 (58.62%), Query Frame = 2
Query:   71 YSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFSTHGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILE-GELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPH 676
            Y   + L   I LP   +A + L+V +II++AGP A+LS S+I ++IPTKNP  AA  LDR+L +L + +IL  S +  G R+Y L   ++  V+ ++ VS+ P +  + DK ++  ++ +KD +LE G + +++  GMDF+ Y G + R N+ FN  M   ++   +++ + YKGF N+  LVDV            +K+PH
Sbjct:   39 YLSGLGLSRLICLPMALRAAIELNVFEIISQAGPDAQLSPSDIVAKIPTKNPS-AAISLDRILRMLGASSILSVSTTKSG-RVYGLNEESRCLVASEDKVSVVPMLLFTSDKAVVESFYNIKDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLKELVDVGGGIGTSLSNIVAKHPH 239          
BLAST of CN182068 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.030e-23
Identity = 66/212 (31.13%), Postives = 112/212 (52.83%), Query Frame = 2
Query:   59 EEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGP-GAELSASEIASQIPTKNPEG-AAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKAL-GMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYP 673
            E+     AMVL + +V PAV  A ++L++ +II KA P GA +S SEIAS++P           LDR+L LL S+++L  +  T       R+Y L+ V KY V D++   +  +        ++  W   K+ +++ ++   K + G+  Y+++G D + N++FN  M+   +  + +++E Y GF+ I+ LVDV            SKYP
Sbjct:   21 EDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYP 232          
BLAST of CN182068 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.100e-12
Identity = 57/214 (26.64%), Postives = 99/214 (46.26%), Query Frame = 2
Query:   38 KSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFSTHGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG-FQNITRLVDVXXXXXXXXXXXXSKYPH 676
            K  V + + + +   ++ G A  L  V +  V L ++DII+       ++ +++AS++P  +       L R+L  LV   IL    S  G + Y+L P+A   +S     SM P +     K  M  W  +KD + +   ++ KA+GM  ++YL      +++FN GM G+T  + + ++   +  FQ I  LVDV              +PH
Sbjct:    6 KDDVLDIKAQAHVWKIIYGFADSL--VLRCAVELGIVDIIDNNNQ--PMALADLASKLPVSDVN--CDNLYRILRYLVKMEILRVEKSDDGQKKYALEPIATL-LSRNAKRSMVPMILGMTQKDFMTPWHSMKDGLSDNGTAFEKAMGMTIWEYLEGHPDQSQLFNEGMAGETRLLTSSLISGSRDMFQGIDSLVDVGGGNGTTVKAISDAFPH 212          
BLAST of CN182068 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.588e-11
Identity = 55/189 (29.10%), Postives = 91/189 (48.15%), Query Frame = 2
Query:  116 VFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFSTHGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQIL-EGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIV-ESYKGFQNITRLVDVXXXXXXXXXXXXSKYPH 676
            V +  V LD+ +II+ +G    ++ SE++S++P++     A  L RV+  LV   +   + S  G   Y LAP AKY V   +   +   + ++ DK  M  W  LKD +  E   ++ KALG + + Y+      N++FN  M   +  +++ +V E    F  IT LVDV            + +PH
Sbjct:   26 VLKCAVQLDLANIIHNSG--TSMTLSELSSRLPSQPVNEDA--LYRVMRYLVHMKLFTKA-SIDGELRYGLAPPAKYLVKGWDKCMVGSILAIT-DKDFMAPWHYLKDGLSGESGTAFEKALGTNIWGYMAEHPEKNQLFNEAMANDSRLIMSALVKECGNIFNGITTLVDVGGGTGTAVRNIANAFPH 208          
The following BLAST results are available for this feature:
BLAST of CN182068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
OMT2_CHRAE1.379e-3943.22Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
IMT1_MESCR3.755e-3739.19Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
COMT1_MAIZE3.514e-3535.68Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
COMT1_SACOF8.656e-3438.28Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
OMT1_ORYSJ1.130e-3334.35Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
SMT_COPJA1.293e-2935.47(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA4.030e-2331.13Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
4OMT_COPJA1.100e-1226.643'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
6OMT_COPJA1.588e-1129.10(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001O13_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001O13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182068 ID=CN182068; Name=CN182068; organism=Citrus sinensis; type=EST; length=676bp
GAAATTAAACGCGCAAATGGGTTCTTTCACTAAGAGCAAATCAAAAGTGA
CCAATGAAGAGGAAGAGGTATATTCACATGCCATGGTACTGGGAAGTGCA
ATAGTGCTACCCGCGGTTTTTCAAGCAGTAGTAAATCTTGATGTTCTTGA
TATCATAAACAAAGCTGGTCCTGGTGCTGAGCTTTCTGCTTCAGAGATTG
CTTCTCAAATTCCCACCAAAAATCCTGAGGGTGCTGCCAAGATGTTGGAT
CGGGTTCTCGGGCTTCTGGTGAGCTTCAATATCCTTTGTTGCTCTTTCAG
TACTCATGGAGTAAGGCTCTACAGTCTCGCTCCTGTCGCTAAATACTATG
TGAGTGATCAAAACGGCGTCTCAATGCGTCCCTATATGAACTTGTCTCTT
GACAAAGTAATGATGCCTGGCTGGTTCCAATTGAAAGACCAAATTCTTGA
AGGAGAACTTTCGTATAATAAAGCCCTCGGAATGGATTTCTACGATTATC
TGGGCACCGACTCCAGGTTCAATGAAGTTTTCAACAATGGAATGATCGGC
CAGACTTCTTTTGTAATCAATAAGATTGTAGAATCCTACAAAGGCTTTCA
GAATATTACGCGCCTTGTTGACGTTGGCGGTGGTTTAGGAATCACCCTTG
CGACCATAATTTCCAAATACCCTCAT
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